Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq70862 136 5e-27 seq69487 118 1e-21 seq44439 118 1e-21 seq42012 91.5 2e-13 seq32811 86.0 9e-12 seq86166 84.2 3e-11 >seq70862 Length=68494 Score = 136 bits (150), Expect = 5e-27 Identities = 145/189 (77%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 145151 ATAATATTCCATTAACttttttgatttttCTAACTTCGT-CCAGTCTCTAAATCTTTTTC 145209 ||||||||| ||||| | ||| |||| || || ||| ||| | | |||||||||||| Sbjct 32425 ATAATATTCAATTAATTCTTTAGATTGTT-TATTTTCTAACCATTTTTTAAATCTTTTTC 32367 Query 145210 CTCCACTATTGCATAATTTAGTTGCGTTAAAACATTCTGTGTTCTTGTCGACTACGAGCT 145269 ||||| || |||||||| ||||| |||||| || ||| || || || | || | | Sbjct 32366 CTCCATCTTTACATAATTTTGTTGCATTAAAATATCTTGTATTTTTATCTATTATTAATT 32307 Query 145270 TAAAATCTCCAAATAACCCATAATAAAAGTTAtttttgattttttCATAACAAACGTCAT 145329 |||||||| ||||||| ||||||||| | |||| ||| |||| ||||||||| | || | Sbjct 32306 TAAAATCTTCAAATAAACCATAATAATAATTATCTTTAATTTGTTCATAACATATATCTT 32247 Query 145330 TTAATGATG 145338 |||| |||| Sbjct 32246 TTAAAGATG 32238 Score = 89.7 bits (98), Expect = 7e-13 Identities = 149/214 (70%), Gaps = 5/214 (2%) Strand=Plus/Minus Query 1914 ATAATATTGAATTAAtttttttGATCTTAAAGTTTTATTCCAATCAACAAATCTTTTTCC 1973 |||||||| |||||||| ||| ||| | | ||| ||| | |||||||||||| Sbjct 32425 ATAATATTCAATTAATTCTTTAGATTGTTTATTTTCTAACCATTTTTTAAATCTTTTTCC 32366 Query 1974 TCCTAAAACACACAGCTTGGTGGCGTTAAAACAACCCGtttttttATCAACAATTAACGG 2033 ||| ||| | || || || |||||| | | || |||||||| | ||||| Sbjct 32365 TCCATCTTTACATAATTTTGTTGCATTAAAATATCTTGTATTTTTATCTATTATTAATTT 32306 Query 2034 AAAATCTCCAAACAACCCCTTATAAAAGGTACCTTTTATCTGTTCATAACACACTTCATT 2093 ||||||| |||| || || | |||| | || |||| || ||||||||||| | || || Sbjct 32305 AAAATCTTCAAATAAACCATAATAATAATTATCTTTAATTTGTTCATAACATATATCTTT 32246 Query 2094 TAAA---GAATCCA--TTATTTATCAATAATTTT 2122 |||| ||| || ||||||| ||| ||||| Sbjct 32245 TAAAGATGAACTCATTTTATTTAGAAATCATTTT 32212 >seq69487 Length=54441 Score = 118 bits (130), Expect = 1e-21 Identities = 285/416 (69%), Gaps = 19/416 (5%) Strand=Plus/Minus Query 1719 TTTATATTCATTAACGAAATAATTTATAATTATATTGTTACATTTATCATAAAATTCTAC 1778 |||| ||||||| | ||||| || |||||| || | | |||||||||||| | Sbjct 10340 TTTAAATTCATTGATAAAATATGTTTCAATTATTTTATAAACTTTATCATAAAAATAATT 10281 Query 1779 TGAAATCCAAGAAGCAATGTCAAGAATAAATTCTTTTGGAAGATATGTACC-TGTAATTT 1837 |||||||| ||||||| | | ||| ||||||||| | | |||||| | |||| | Sbjct 10280 AGAAATCCATAAAGCAATATGTAAAATTAATTCTTTTTGTAAATATGTTTGATATAATCT 10221 Query 1838 GTTTTGTAATTTCATCATTGTTATCTCCCTT-AATT-TCATATAACAACGACTCGGTTTT 1895 | ||||| ||| |||| || ||| |||| |||| | ||| | | ||| | | ||| Sbjct 10220 -TATTGTA--TTCTTCATATTT-TCTACCTTTAATTATAATAAAGCGACGGCCTGAATTT 10165 Query 1896 TATGTCACAC-CGGGTTTC---ATAATATTGAATTAAtttttttGATCTTAAAGTTTTAT 1951 | || | | |||| |||||| | |||||||| ||| ||| | | |||| | Sbjct 10164 G--GACAATCGCTTTTTTCGTAATAATAATCAATTAATTCTTTAGATTGTTTA-TTTTCT 10108 Query 1952 TCCAATCAACAAATCTTTTTCCTCCTAAAACACACAGCTTGGTGGCGTTAAAACAACCCG 2011 || | |||||||||| |||| | ||| || || || |||||| | || | Sbjct 10107 AACATTTTTTAAATCTTTTTGCTCCATCTTTATACAATTTTGTTGCATTAAAATATCCTG 10048 Query 2012 tttttttATCAACAATTAACGGAAAATCTCCAAACAACCCCTTATAAAAGGTACCTTTTA 2071 | |||||||| | ||||| |||||||||||| || || | |||| | || |||| | Sbjct 10047 TATTTTTATCTATTATTAATTAAAAATCTCCAAATAAACCATAATAATAAATAACTTTAA 9988 Query 2072 TCTGTTCATAACACACTTCATTTAAAGA--ATC-CA--TTATTTATCAATAATTTT 2122 | |||||||| || | || |||||||| | | || |||||||| ||| ||||| Sbjct 9987 TTTGTTCATAGCATATATCTTTTAAAGATGAGCTCATTTTATTTATAAATCATTTT 9932 Score = 114 bits (126), Expect = 2e-20 Identities = 149/205 (73%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 145151 ATAATATTCCATTAACttttttgatttttCTAACTTCGTCCAGTCTCTAAATCTTTTTCC 145210 |||||| || ||||| | ||| |||| || || ||| || | | ||||||||||| | Sbjct 10144 ATAATAATCAATTAATTCTTTAGATTGTT-TATTTTCTAACATTTTTTAAATCTTTTTGC 10086 Query 145211 TCCACTATTGCATAATTTAGTTGCGTTAAAACATTCTGTGTTCTTGTCGACTACGAGCTT 145270 |||| || | ||||| ||||| |||||| || |||| || || || | || | | Sbjct 10085 TCCATCTTTATACAATTTTGTTGCATTAAAATATCCTGTATTTTTATCTATTATTAATTA 10026 Query 145271 AAAATCTCCAAATAACCCATAATAAAAGTTAtttttgattttttCATAACAAACGTCATT 145330 ||||||||||||||| ||||||||| | || ||| |||| |||||| || | || || Sbjct 10025 AAAATCTCCAAATAAACCATAATAATAAATAACTTTAATTTGTTCATAGCATATATCTTT 9966 Query 145331 TAATGATGCCATATTTTTAGTTATA 145355 ||| |||| | ||||| ||||| Sbjct 9965 TAAAGATGAGCTCATTTTATTTATA 9941 >seq44439 Length=35018 Score = 118 bits (130), Expect = 1e-21 Identities = 141/189 (75%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 145151 ATAATATTCCATTAACttttttgatttttCTAACTTCGT-CCAGTCTCTAAATCTTTTTC 145209 ||||| | | ||||| | ||| |||| || || ||| ||| | | |||||||||||| Sbjct 11470 ATAATGTACAATTAATTCTTTAGATTGTT-TATTTTCTAACCATTTTTTAAATCTTTTTC 11528 Query 145210 CTCCACTATTGCATAATTTAGTTGCGTTAAAACATTCTGTGTTCTTGTCGACTACGAGCT 145269 ||||| | |||||||| ||||| |||||| || |||| || || || || | | Sbjct 11529 CTCCATCTTAACATAATTTTGTTGCATTAAAATATCCTGTATTTTTATCTCTTATTAATT 11588 Query 145270 TAAAATCTCCAAATAACCCATAATAAAAGTTAtttttgattttttCATAACAAACGTCAT 145329 |||||||||||||||| ||||||||| | |||| ||| |||| || ||| || | || | Sbjct 11589 TAAAATCTCCAAATAAACCATAATAATAATTATCTTTAATTTGTTTATAGCATATATCTT 11648 Query 145330 TTAATGATG 145338 |||| |||| Sbjct 11649 TTAAAGATG 11657 Score = 95.1 bits (104), Expect = 2e-14 Identities = 266/411 (65%), Gaps = 42/411 (10%) Strand=Plus/Plus Query 1720 TTATATTCATTAACGAAATAATTTATAATTATATTGTTACATTTATCATAAAATTCTACT 1779 ||| ||||||| | ||||| ||| |||||| || | | |||||||||||| || Sbjct 11307 TTAAATTCATTGATTAAATATTTTTCAATTATTTTATAAACTTTATCATAAAAATCATTA 11366 Query 1780 GAAATCCAAGAAGCAATGTCAAGAATAAATTCTTTTGGAAGATATGTACCTGTAAT--TT 1837 |||||||| ||||||| | ||| ||||||||| | | |||||| ||||| || || Sbjct 11367 GAAATCCATAAAGCAATACTTAAAATTAATTCTTTTTGTAAATATGTTCCTGTTATAATT 11426 Query 1838 GTTTTGTAAT-TTCATCATTGTTATCTCCCTTAATTTCATATAACAACGACTCGGTTTTT 1896 | ||||| | ||||||| | || ||| |||| | |||| Sbjct 11427 TTATTGTATTCTTCATCA-TATTTTCTACCTTTA---------------------CTTTT 11464 Query 1897 ATGTCACACCGGGTTTCATAATATTGAATTAAtttttttGATCTTAAAGTTTTATTCCAA 1956 || | ||||| | |||||||| ||| ||| | | ||| ||| Sbjct 11465 CTG------------TAATAATGTACAATTAATTCTTTAGATTGTTTATTTTCTAACCAT 11512 Query 1957 TCAACAAATCTTTTTCCTCCTAAAACACACAGCTTGGTGGCGTTAAAACAACCCGttttt 2016 | ||||||||||||||| ||| | || || || |||||| | || || ||| Sbjct 11513 TTTTTAAATCTTTTTCCTCCATCTTAACATAATTTTGTTGCATTAAAATATCCTGTATTT 11572 Query 2017 ttATCAACAATTAACGGAAAATCTCCAAACAACCCCTTATAAAAGGTACCTTTTATCTGT 2076 ||||| ||||| |||||||||||| || || | |||| | || |||| || ||| Sbjct 11573 TTATCTCTTATTAATTTAAAATCTCCAAATAAACCATAATAATAATTATCTTTAATTTGT 11632 Query 2077 TCATAACACACTTCATTTAAA---GAATCCA--TTATTTATCAATAATTTT 2122 | ||| || | || |||||| ||| || ||||||| ||| ||||| Sbjct 11633 TTATAGCATATATCTTTTAAAGATGAACTCATTTTATTTAGAAATGATTTT 11683 >seq42012 Length=56607 Score = 91.5 bits (100), Expect = 2e-13 Identities = 111/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 73410 AAAGAAGGTCAAATAAGAAACAATTTATTAGGTAAAAGGTGT-GAAATGTCTGCTAGAAC 73468 |||||||| ||| ||| |||||| | || |||| |||| || | ||||| ||||| Sbjct 12094 AAAGAAGGAAGAATTAGAGGAAATTTAATGGG-AAAACGTGTTGATTTTTCTGCAAGAAC 12152 Query 73469 TGTTATAGGACCAGATCCAACACTAAAAATTGATGAAGTAATTGTTCCAAAAGAAATTGC 73528 |||||| || ||||||| ||| ||||||||||||| ||||||| | |||||| Sbjct 12153 TGTTATCACTCCTGATCCAAATTTAAGAATTGATGAAGTAGGAGTTCCAAGATCAATTGC 12212 Query 73529 TCAATCTTTAACTTTTCCTGACTTTGTTA 73557 ||| |||||| ||||| || |||||| Sbjct 12213 ACAAAATTTAACGTTTCCAGAAATTGTTA 12241 >seq32811 Length=28753 Score = 86.0 bits (94), Expect = 9e-12 Identities = 125/176 (71%), Gaps = 13/176 (7%) Strand=Plus/Minus Query 145199 AAATCTTTTTCCTCCACTATTGCATAATTTAGTTGCGTTAAAACATTCTGTGTTCTTGTC 145258 ||||||| | |||||| || |||||||| ||||| |||||| || |||| || || || Sbjct 5120 AAATCTTCTCCCTCCATCTTTACATAATTTTGTTGCATTAAAATATCCTGTATTTTTATC 5061 Query 145259 GACTACGAGCTTAAAATCTCCAAATAACCCATAATA--AA-----AGTTAtttttgattt 145311 | || | ||||||||||||||||| |||||||| || | || |||| |||| Sbjct 5060 TATTATTAATTTAAAATCTCCAAATAAACCATAATAGTAATTAGGACCTACTTTTAATTT 5001 Query 145312 tttCATAACA------AACGTCATTTAATGATGCCATATTTTTAGTTATACCTTAT 145361 |||||||| || || ||||| |||| | ||||| ||||| |||| Sbjct 5000 GCTCATAACATAGGCCTACATCTTTTAAAGATGAGCTCATTTTATTTATAAATTAT 4945 >seq86166 Length=53614 Score = 84.2 bits (92), Expect = 3e-11 Identities = 122/166 (73%), Gaps = 5/166 (3%) Strand=Plus/Minus Query 189284 TAATTTGATTAATAGTCATTCTACTTGGTAAACAATGTGGATTGATGATCATATCAGGGA 189343 ||||||| || ||||||||| ||| || | ||||||||| |||||||| ||||| | Sbjct 40524 TAATTTGCC-AACAGTCATTCTTGATGGAAATCCATGTGGATTCATGATCATGTCAGG-A 40467 Query 189344 TAGA-ACCATCTTCCATAAAAGGCATGTCAACTTCTTCTAAAATCATTCCAACGGTTCCT 189402 ||| |||| || |||| ||||| || ||| || | ||| | ||||| | || Sbjct 40466 CAGATACCAGAATCATTAAATGGCATATCTTCTTGTTGAACAATTAGTCCAATGACACCC 40407 Query 189403 TTTTGTGCCATTGC-ACTGCAAAATTTATCACCAATTTCTGGTCTT 189447 || ||| |||| | ||| | || ||||||||||||||||||||| Sbjct 40406 TTCTGT-CCATGCCTACTACTGAACTTATCACCAATTTCTGGTCTT 40362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679029146386560