Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq76947 123 2e-23 seq85547 114 1e-20 seq73005 111 1e-19 >seq76947 Length=48948 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || ||||| ||||||| |||||||||||||| |||||||| || || || | Sbjct 23264 TCCACCACGAAGTCTGAGTACCAGATGAAGTGTTGATTCCTTTTGAATATTATAATCTGA 23323 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || || || |||||||| ||| || || ||| ||||||||| |||||||| || Sbjct 23324 CAGAGTGCGACCATCTTCCAGTTGCTTACCAGCAAAGATAAGTCGCTGTTGATCAGGTGG 23383 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| || || ||||| | ||| || | | ||| ||||||| || || Sbjct 23384 AATTCCTTCTTTGTCTTGAATTTTTGCCTTTACATTTTCAATTGTGTCACTTGGTTCCAC 23443 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | ||||| |||| || || | ||| || ||||| |||||||| Sbjct 23444 TTCCAGAGTGATTGTTTTACCAGTGAGTGTCTTCACAAAGATTTGCAT 23491 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||||| || | ||| || | || || || ||||| || ||||| || ||||| | Sbjct 22580 TCCTCCCCTGAGACGAAGAACTAAATGTAGAGTAGATTCCTTCTGAATATTATAGTCCGA 22639 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | ||| || |||||||| || ||| | || ||||| |||||||| || Sbjct 22640 GAGAGTGCGGCCATCCTCTAATTGTTTACCTGCAAAAATCAGTCTCTGTTGATCGGGAGG 22699 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTT-GACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||||| ||||| ||||| |||||| ||| | | ||| ||| |||| || || Sbjct 22700 AATTCCTTCTTTATCCTGAATTT-TTGCTTTGACATTTTCAATAGTATCACTTGGTTCTA 22758 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | || ||| |||| ||||| |||||||||||||| |||||||| Sbjct 22759 CTTCCAAAGTAATGGTTTTCCCGGTTAATGTTTTTACAAATATTTGCAT 22807 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || ||||| || |||| ||||| || || || ||||| ||||||||||| | Sbjct 23493 CCACCTCGAAGTCTCAGCACCAAATGAAGAGTAGACTCCTTTTGTATGTTGTAGTCTGAG 23552 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| || |||||||| || || || ||| | || | | || ||||| || Sbjct 23553 AGTGTACGACCATCTTCCAGCTGCTTTCCTGCAAAAATCAAACGCTGCTGATCTGGAGGA 23612 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||||||||| || | | ||| || | | ||| ||| |||| |||||| | Sbjct 23613 ATACCTTCCTTATCTTGGATCTTTGCCTTCACATTTTCAATAGTATCACTGGGCTCTACT 23672 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || | |||||| |||| || || | ||| || ||||| || |||||| Sbjct 23673 TCCAAAGTGATGGTTTTTCCAGTGAGTGTCTTCACAAAGATCTGCATT 23720 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 18111 CTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAA 18170 || || |||| ||| || ||||||||||| |||||||||||||||| | || || Sbjct 23049 CTGAGCACCAAGTGGAGAGTTGATTCTTTCTGAATGTTGTAGTCGGAGAGGGTACGACCG 23108 Query 18171 TCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTA 18230 ||||||| |||||| || ||| |||| | | || ||||| || | |||||| ||| Sbjct 23109 TCTTCCAGTTGTTTTCCGGCAAAGATCAAGCGCTGCTGATCGGGAGGTATGCCTTCTTTA 23168 Query 18231 TCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || || | |||| || || | | | | ||||||| || || ||| | || || Sbjct 23169 TCTTGTATCT-TTGCTTTTACGTTTTCTATGGTGTCACTAGGTTCAACTTCCAGAGTTAT 23227 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 | || || || | |||||||||||||| |||||| Sbjct 23228 AGTCTTCCCTGTGAGAGTTTTTACAAAAATCTGCATT 23264 >seq85547 Length=49496 Score = 114 bits (126), Expect = 1e-20 Identities = 156/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 18113 AAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 ||| |||| ||||||||||||||| ||||||||||| || || | || || | ||| Sbjct 24425 AAGCACCAAGTGAAGTGTTGATTCCTTTTGAATGTTATAATCAGACAAAGTACGCCCATC 24366 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 |||||||||||| || ||| | || | ||| |||||||| || | ||||| ||||| Sbjct 24365 TTCCAATTGTTTCCCAGCAAAAATCAATCTCTGTTGATCTGGTGGTATACCTTCTTTATC 24306 Query 18233 GGCAATTTGTTGCTTG-ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGC 18291 ||||| |||||| || | | ||| || |||| || || ||| | ||||| Sbjct 24305 TTGAATTT-TTGCTTTCACGTTTTCAATTGTATCACTTGGTTCAACTTCCAAAGTGATAG 24247 Query 18292 TTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 |||| || || | || || ||||||||||||||| Sbjct 24246 TTTTCCCAGTGAGGGTCTTCACAAAAATTTGCATT 24212 Score = 107 bits (118), Expect = 1e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 18135 TCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAG 18194 ||||||||||| || || || | | || || |||||||| ||||||||| ||| || Sbjct 24859 TCTTTTTGAATATTATAATCCGAAAGAGTACGACCATCTTCCAGTTGTTTGCCAGCAAAG 24800 Query 18195 ATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG-ACCTG 18253 || ||||| |||||||| || | |||||||||||| |||| | |||| || | Sbjct 24799 ATGAGTCTCTGTTGATCAGGTGGAATGCCTTCCTTATCTTGGATTT-TAGCTTTCACATT 24741 Query 18254 TGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTAC 18313 | ||| || |||| ||| || ||| | || || |||| || || |||||||| || Sbjct 24740 TTCAATGGTATCACTGGGTTCCACTTCCAGAGTAATTGTTTTCCCTGTTAATGTTTTAAC 24681 Query 18314 AAAAATTTGCATT 18326 ||||||||||||| Sbjct 24680 AAAAATTTGCATT 24668 >seq73005 Length=127446 Score = 111 bits (122), Expect = 1e-19 Identities = 157/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 |||||| || | ||||| |||||||| |||||||||||||| || | || ||| | | Sbjct 43245 TCTAAGAACGAGATGAAGGGTTGATTCCTTTTGAATGTTGTAATCAGACAGGGTTCTGCC 43186 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||||||||| ||||| ||| ||||||| | || || || || | |||||||| Sbjct 43185 ATCTTCCAATTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGAGGTATTCCTTCCTT 43126 Query 18230 ATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGA 18288 ||| |||| | || || || | | | | || |||| ||| || ||| | ||| | Sbjct 43125 ATCCTGGATTT-TAGCTTTCACATTTTCTATGGTATCACTGGGTTCCACTTCCAAGGTAA 43067 Query 18289 TGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || |||| || || | ||| || ||||| || |||||| Sbjct 43066 TGGTTTTACCAGTAAGTGTCTTGACAAATATCTGCATT 43029 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||||| || || || |||| ||||| || ||||| |||||||||||||| || | Sbjct 43029 TCCTCCCCTGAGCCTGAGAACCAGATGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGA 42970 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || ||| | |||||||| || || || ||| | ||||| | || ||||| || Sbjct 42969 CAGGGTTCGGCCATCTTCCAGCTGCTTTCCGGCAAAAATAAGACGCTGCTGATCTGGAGG 42910 Query 18218 CACGCCTTCCTTATCGGCAAT-TTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||||||||||| ||| ||| | ||| || | ||| ||||||| || || Sbjct 42909 GATCCCTTCCTTATCCTGAATCTTGGT-CTTCACATTCTCAATTGTGTCACTAGGTTCTA 42851 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||| || |||| || || |||||||| ||||| || ||||| Sbjct 42850 CCTCAAGGGTAATTGTTTTACCAGTTAATGTTTTCACAAATATCTGCAT 42802 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || || || || |||| |||||| || ||| ||||||||||||||||| | Sbjct 43485 TCCACCACGCAGCCTGAGAACCAAGTGAAGGGTGCTTTCCTTTTGAATGTTGTAGTCAGA 43426 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | ||| | ||||||||| || ||||| ||| | || || | || ||||| || Sbjct 43425 TAATGTGCGGCCATCTTCCAACTGCTTGCCAGCAAATATCAGACGCTGCTGATCTGGAGG 43366 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| || || || | | ||| || | | ||| || |||| ||||| Sbjct 43365 AATTCCTTCTTTGTCCTGGATCTTTGCCTTTACATTTTCAATGGTATCACTTGGCTCTAC 43306 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | || ||| | ||||| ||||| ||||| |||||||| |||||| Sbjct 43305 TTCCAGAGTAATGGTCTTGCCTGTCAAAGTTTTAACAAAAATCTGCATT 43257 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 ||| || || | ||| || || | || |||||||| |||||||| ||||||||||| | Sbjct 43713 TCCACCACGCAATCTGAGAACAAGATGGAGTGTTGACTCTTTTTGGATGTTGTAGTCAGA 43654 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || || || ||||||||| || || || ||| |||| | | ||||| || || Sbjct 43653 CAAGGTGCGACCATCTTCCAACTGCTTCCCAGCAAAGATCAAACGCTGTTGGTCAGGAGG 43594 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | |||||| || || |||| |||| ||||| | | | | || |||| ||| || Sbjct 43593 AATGCCTTCTTTGTCTTGGATTT-TTGCTTTGACATTTTCTATTGTATCACTGGGTTCAA 43535 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | || || |||| || || | ||| || ||||| || |||||| Sbjct 43534 CTTCTAAAGTTATTGTTTTACCAGTGAGTGTCTTGACAAATATCTGCATT 43485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378916774251960