Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq76947 100 2e-16 seq73005 89.7 4e-13 >seq76947 Length=48948 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| |||||||||||||| | || || ||||| || || | || || ||| |||| Sbjct 23035 ATGCAAATATTTGTTAAAACACTCACAGGAAAAACCATTACTTTGGAAGTAGAACCGAGT 22976 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | | |||| | ||| |||| ||| || | ||||||||| | || || ||| Sbjct 22975 GATACTATAGAGAATGTGAAGGCAAAGATCCAAGATAAAGAAGGCATTCCACCCGATCAG 22916 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || | || |||| ||| || |||||||| |||||| ||| | ||||| | Sbjct 22915 CAGAGATTGATATTTGCTGGAAAACAACTTGAAGATGGTCGCACTCTTTCAGATTATAAT 22856 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || |||||||| |||| || |||||||| || || || | |||||| Sbjct 22855 ATCCAGAAAGAATCCACTCTCCATTTAGTATTGCGCTTAAGAGGAGGT 22808 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||| ||||| | || || || || ||||| | || || ||| | || Sbjct 23263 ATGCAGATTTTTGTAAAAACTCTCACAGGGAAGACTATAACTCTGGAAGTTGAACCTAGT 23204 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| |||||| || || | ||| || | ||||||||| |||| || ||| Sbjct 23203 GACACCATAGAAAACGTAAAAGCAAAGATACAAGATAAAGAAGGCATACCTCCCGATCAG 23144 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || || || || | ||| || |||||||||||||| || | ||| |||| | Sbjct 23143 CAGCGCTTGATCTTTGCCGGAAAACAACTGGAAGACGGTCGTACCCTCTCCGACTACAAC 23084 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || |||||||| | || || || || ||| | | ||||| || ||| Sbjct 23083 ATTCAGAAAGAATCAACTCTCCACTTGGTGCTCAGGTTGCGTGGTGGT 23036 >seq73005 Length=127446 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||||||||| || || | || || ||||| || ||| | || || ||| | || Sbjct 43030 ATGCAGATATTTGTCAAGACACTTACTGGTAAAACCATTACCTTGGAAGTGGAACCCAGT 43089 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | |||||| ||| || | ||||| | || ||||| |||| ||||||| Sbjct 43090 GATACCATAGAAAATGTGAAAGCTAAAATCCAGGATAAGGAAGGAATACCTCCTGACCAG 43149 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || ||| | || | ||| ||||| ||| |||||||| || || || ||||||| | Sbjct 43150 CAGCGTCTTATCTTTGCTGGCAAGCAATTGGAAGATGGCAGAACCCTGTCTGATTACAAC 43209 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 || || || || | || |||||| | || | ||||| | || || Sbjct 43210 ATTCAAAAGGAATCAACCCTTCATCTCGTTCTTAGATTGAGAGGTGG 43256 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||||||||| || || | || || ||||| ||||| | || || ||| | || Sbjct 43486 ATGCAGATATTTGTCAAGACACTCACTGGTAAAACAATAACTTTAGAAGTTGAACCCAGT 43545 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 || | |||||| ||| || | |||||| | ||||||||| | || |||||| Sbjct 43546 GATACAATAGAAAATGTCAAAGCAAAAATCCAAGACAAAGAAGGCATTCCTCCTGACCAA 43605 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || ||||| || | ||| || || || |||||||| || || || |||| | Sbjct 43606 CAGCGTTTGATCTTTGCTGGGAAGCAGTTGGAAGATGGTCGCACCTTGTCTGACTACAAC 43665 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 || || |||||| | || || ||| | || | ||||||| || || Sbjct 43666 ATCCAAAAAGAGTCAACACTCCATCTTGTTCTCAGATTGCGTGGTGG 43712 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 24828 CATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATC 24887 |||||||||||||||||| ||||| ||||| || ||||| || ||| | || || ||| | Sbjct 42798 CATCATGCAGATATTTGTGAAAACATTAACTGGTAAAACAATTACCCTTGAGGTAGAACC 42857 Query 24888 GAGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGA 24947 || |||| | || | ||| ||| || ||| | || ||||| | || || Sbjct 42858 TAGTGACACAATTGAGAATGTGAAGACCAAGATTCAGGATAAGGAAGGGATCCCTCCAGA 42917 Query 24948 CCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTA 25007 ||||| ||| | || | ||| || || || ||||||||| | || || ||||| Sbjct 42918 TCAGCAGCGTCTTATTTTTGCCGGAAAGCAGCTGGAAGATGGCCGAACCCTGTCTGATTA 42977 Query 25008 CAGCATACAGAAAGAGGCCACGCTTCAT 25035 || ||| || || || | || |||||| Sbjct 42978 CAACATTCAAAAGGAATCTACCCTTCAT 43005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417832896623360