Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq76348 147 3e-30 seq45383 134 2e-26 seq73121 127 3e-24 seq84422 122 1e-22 seq55348 102 1e-16 seq89448 87.8 2e-12 >seq76348 Length=48548 Score = 147 bits (162), Expect = 3e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 33966 AAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025 ||||||||||| ||||| |||||||| || |||||||| || || |||||| |||||| Sbjct 19923 AAATTTTCATTAACTATACCATCACTAGCAGCAAAAAAAGCTAAAACATGTGAAATAAAA 19864 Query 34026 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 34085 | |||||| ||| | || | ||||| | ||||||||||| | ||| |||||| Sbjct 19863 TGTTTTTCATCTTCATTCAGACGTTCCCAATGAACCATATCTTTAGAAAGATCTACTTCT 19804 Query 34086 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGG 34145 || |||||||| ||||| || || || || |||||||| | |||||| || |||||| Sbjct 19803 TCTACTGTCCAGAATGAAGCTTCAGCTTTCTTATACATTTGCCAGATATCTGGATATTCA 19744 Query 34146 ATTGGGAAAATAACAAATCTATTTGGATT 34174 || || || || ||||| | ||||||| Sbjct 19743 ATAGGAAAGATGACAAAACGTCTTGGATT 19715 Score = 111 bits (122), Expect = 2e-19 Identities = 166/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 33374 AACATTGTA--AAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCT 33431 |||||| || || || || |||| |||||| | | ||||||||| || ||||| Sbjct 25448 AACATTATACAAACCTTATTGCATCCTAATTCAACTAGAAGTCTATCTGCTACAAATTCA 25389 Query 33432 ATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTA 33491 |||||| | |||| | | |||||||||||| || ||| ||| |||||||| | || Sbjct 25388 ATATATCGTCTCATAAGATTACAATTCATTCCAATAAGTGCAACAGGAAGAGCTTCTGTT 25329 Query 33492 AGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTC 33551 |||||||||||||| || ||| |||| | | || || | ||| | |||| Sbjct 25328 AGAAATTCTTGTTCTATTACTACTGCATCTTTGATTATTTGTATAATTCTCTCTTTGGAG 25269 Query 33552 GGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 33606 ||| || || ||||| | ||||| |||||||| ||||| || || ||||||| Sbjct 25268 GGTTTATTTACCAAATGACTGAACATTAAACATGCAAAATCACAATGGAGACCCT 25214 Score = 107 bits (118), Expect = 2e-18 Identities = 111/146 (76%), Gaps = 3/146 (2%) Strand=Plus/Minus Query 33235 TTTAAAAGTCAACATCTAAAGAAAAA---TGATTGTCTTCTTGAGACATAACTCCCATTT 33291 ||||||| || |||| || | |||| |||| |||| || | ||| ||||| || Sbjct 39504 TTTAAAAATCTGCATCAAATGTAAAACACTGATCTTCTTTTTTTGCCATCACTCCACATT 39445 Query 33292 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33351 | || ||||| || || | |||||||||||| || ||||||||||||| ||||||| || Sbjct 39444 TCTGATATTCTCCAACTCTTTTTTCGAAAAAGTTTGTTTTTCCTTCCAGAGATATATGTT 39385 Query 33352 CCATGAAATCAAACGGATTNNNAACA 33377 |||| |||||||| ||||| |||| Sbjct 39384 CCATAAAATCAAATGGATTTTCAACA 39359 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 33814 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTAT 33873 ||||||||| | | | |||||| | |||| || ||||||||| || || ||||||| Sbjct 21768 CATTAAAGAAAAATTACCTTTCATCAGGATCTGAAATATAAGTATCAATTAACAGACTAT 21709 Query 33874 ACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGG 33933 ||||||| ||||||| ||||| || | || || ||||| || || || | || || | Sbjct 21708 ACATTTCTGAATGAACATTTTCTATTGAAATTTGGAATCCATAAAAGCAGCGTGCTTCAG 21649 Query 33934 TAATCTGCACTTCT 33947 ||| || |||||| Sbjct 21648 TAACTTGAACTTCT 21635 >seq45383 Length=59856 Score = 134 bits (148), Expect = 2e-26 Identities = 113/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 63661 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGAT 63720 ||||| | |||||||| | ||||| ||||| || ||||||||||||||||| | || | Sbjct 46156 TAGTTGCAGCATTAAAAAGAGTAGGTGAAGCATGTGTAAACCATTTTTCAGATAATAATT 46097 Query 63721 TGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTA 63780 | ||||||||||| || || || ||||| || ||| ||||||| || |||||||||| Sbjct 46096 TATACGTCTCAATTGCAGAATCAATATCTTCTTTATGTATTCCTATGGCTACACGCATTA 46037 Query 63781 ACATGTGCTGAGGTCTTTC 63799 |||| |||||||||||||| Sbjct 46036 ACATATGCTGAGGTCTTTC 46018 Score = 104 bits (114), Expect = 3e-17 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 63214 CCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63273 |||| | |||||||||| ||||||||||| |||||| | ||| | | |||| | Sbjct 54665 CCAAATTTGGACATTCATGAGGACACATCAATGACCACATATCATCAGCTTCAACTCTCT 54606 Query 63274 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGT 63333 |||||| | ||| ||||||||||| || ||||| ||| | | | ||| || | Sbjct 54605 GCATAAATAAATCGGGAATCCAAAGTGCATAAAATAAATCACGGGCACGGCATTCTTCTT 54546 Query 63334 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63393 |||| ||||| ||||| | |||||| || | | ||| || | |||||| |||||||| | Sbjct 54545 TTCCAGTATTTTTTTTTAAATCGAGAAATTCGAAAATGTCTGCATGCCAAGGTTCCAAAT 54486 Query 63394 ATATGGC 63400 |||| || Sbjct 54485 ATATTGC 54479 >seq73121 Length=35095 Score = 127 bits (140), Expect = 3e-24 Identities = 679/1064 (64%), Gaps = 47/1064 (4%) Strand=Plus/Plus Query 155254 ATGACTCCAATTAATCCCATGTTAGCGGAATCATGTGATTCTGTCAATAAGGCGTTTAAA 155313 |||||||| ||| || ||| | || ||| | ||| ||| | | | || |||||| Sbjct 21105 ATGACTCCTATTCGACCAATGCTTGCTGAACCTTGTCGATCTATAGAATATGCTTTTAAA 21164 Query 155314 AAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTACAAGTTCAT 155373 |||| |||| || |||| ||| ||| | ||||| ||||| || | || ||||||||| Sbjct 21165 AAATGTCCAAATGGTATGTATGCTGAAATTAAATATGATGGAGAGCGTGTTCAAGTTCAT 21224 Query 155374 aaaaaaaaTAACGAGTTTGCATTCTTTAGTAGAAACATGAAACCAGTACTCTCTCATAAA 155433 || ||| | | | ||| ||| |||||| ||| | |||||||||| |||||| Sbjct 21225 AAGAAAGGTGATAAATTTACATATTTTAGTCGAAGTTTAAAACCAGTACAACAACATAAA 21284 Query 155434 GTGGATTATCTCAAAGAATACATACCGAAAGCATTTAAAAAAGCTACGTCTATCGTATTG 155493 | || | ||||| | ||| | ||||| ||| | ||| | | | | | Sbjct 21285 ATATCACATTTTAAAGACCATATAGCTAAAGCTTTTCATCAAGGAAAAGATTTAATTCTT 21344 Query 155494 GATTCTGAAATTGTTCTTGTAGA--CGAACATA-ATGTACCGCTACCGTTTGGAAGTTTA 155550 |||| ||| ||| |||| |||| | || | | | ||| |||| ||||||| |||| Sbjct 21345 GATTGTGAGATTCTTCTATTAGATACAAAAACAGACAAACCTTTACCTTTTGGAACTTTA 21404 Query 155551 GGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGTTTGACTGT 155610 ||| | || |||||| | | |||| | ||| | |||||||| || ||||||||| Sbjct 21405 GGTGTTCATAAAAAGGCTGCTTTTAAAGATGCTACTGTTTGTTTGTTTGTATTTGACTGT 21464 Query 155611 TTATACTTTGATGGATTCGATATGACAGACATTCCATTGTATGAACGAAGATCTTTTCTC 155670 |||| | | |||| ||| | | ||| | | | | ||| |||| |||| Sbjct 21465 ATATATTATAATGGTAAAGATCTAATGGACTGTACTCTCAAAGAAAGAAGGAAAATTCTT 21524 Query 155671 AAAGATGTTATGGTCGAAATACCCAATAGAATAGTA----TTCTCAGAG----TTGACGA 155722 |||| |||| ||| | || | ||| || |||| | | || | | Sbjct 21525 CAAGAAAATATGCAAGAAGTTA--AAGATCATATTAAATTTTCTGAAATGAAATTAATCA 21582 Query 155723 ATATTAGTAACGAGTCTCAGTTAACTGATGTATTAGATGATGCACT-AACGAGAAAATTA 155781 | | ||| || || | | ||| || |||| ||| ||| | || || | ||| Sbjct 21583 AAAATAGAAAAGAAT-TAAGTGAAATGATAAATTT-----TGCCTTCAAACAGGGA-TTA 21635 Query 155782 GAAGGATTGGTCTTAAAAGAT--ATTAATGGCGTA--TACGAACCGGGAAAGAGAAGATG 155837 ||||| | || || |||||| || || ||| ||| |||| || || | || Sbjct 21636 GAAGGTCTTGTTTTGAAAGATCCATCAA----GTACTTACAAACCAGGGAAACGTCATTG 21691 Query 155838 GTTAAAAATAAAGCGAGACTATTTGAACGAGGGTTCCATGGCAGATTCTGCCGATTTAGT 155897 | | || | || ||| ||| | | || ||| ||||| ||| ||| || ||||| Sbjct 21692 GCTTAAGGTGAAAAAAGATTATCTCCATGAAGGTAGTATGGCCGATAGTGCTGACTTAGT 21751 Query 155898 AGTACTAGGTGCCTACTATGGTAAAGGAGGAAAGGGTGGTATCATGGCAGTCTTTCTAAT 155957 || ||||||| || | ||||| || | || || || || ||| | | ||| | || Sbjct 21752 TGTTTTAGGTGCATATTTTGGTACTGGTAGCAAAGGAGGGATGATGTCTATTTTTTTGAT 21811 Query 155958 GGGTTGTTACGACGATGAATCCGGTAAATGGAAGACGGTAACTAAATGTTCC----GGTC 156013 ||| |||| || | ||| |||||| || || |||||| || | || | Sbjct 21812 GGGATGTTTTGATAAGAGGTCCCAGAAATGGTGTACTGTTACTAAA-GTACATGGAGGAC 21870 Query 156014 ACGATGATAATACGTTAAGGGTTTTGCAAGACCAATTAACGATGGTTAAAATTAACAAGG 156073 | |||| ||| || ||| ||||| ||||||||| | || || | Sbjct 21871 ATACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTTAAAGTCAATAATG 21930 Query 156074 ATCCCaaaaaaaTTCCAGAGTGGTTGGTAGTTAATAAAATCTATA-TTCCCGATTTTGTA 156132 | | | ||||| || |||||| ||||| ||| ||| || ||||||||||||| Sbjct 21931 AA---ATGGATATTCCTGAATGGTTGAATGTTAA-AAAGTCTTTAATTCCCGATTTTGTT 21986 Query 156133 -GTAGATGATCCGAAACAATCTCAGATATGGGAAATTTCAGGAGCAGAGTTTAC---ATC 156188 ||| | ||||| ||| |||||| | |||||||| |||| ||||| ||| | | | Sbjct 21987 TGTAAA-GATCCAAAAACATCTCAAGTTTGGGAAATAACAGGTGCAGAATTTTCTAAAGC 22045 Query 156189 TTCCAAGTCACATACAGCGAATGGAATATCAATTAGATTTCCTAGATTTACTAGGATTAG 156248 | ||| | ||||| || |||||||||||||| ||||||||| | |||| ||| | Sbjct 22046 TG--AAG-CTCATACTGCAAATGGAATATCAATAAGATTTCCTCGTGTTACATTAATTCG 22102 Query 156249 AGAAGATAAAACGTGGAAAGAATCTACTCATCTAAACGATTTAG 156292 | |||||| | ||||||||| | ||| | || | || |||| Sbjct 22103 TTATGATAAATCATGGAAAGAAGCAACTACTTTAGAAGAATTAG 22146 >seq84422 Length=160705 Score = 122 bits (134), Expect = 1e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 62114 CCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATT 62173 |||||| || ||||||||||| |||||||| ||| | || || || ||||| ||||| Sbjct 8654 CCATCCATAGAAATGCATACTTGTTAGTTTTCCATAGTTTGGTTCAGCAATATGAATATT 8713 Query 62174 CATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTT 62233 | || || |||||||| ||||| ||||| || ||||||||||||||||| || | || Sbjct 8714 TAACGACTGGCTTTGATCAATGAAAGCTCCTCTATCTGCAGCCATTTTTATAATGGATTT 8773 Query 62234 TTGTGCAATTTCCCAAATAGTT 62255 ||| | |||||||||| |||| Sbjct 8774 TTGAGATATTTCCCAAACAGTT 8795 Score = 93.3 bits (102), Expect = 5e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 62387 TACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62446 ||| || ||||||||||| || ||||| | ||||||||||| ||||| || || | Sbjct 9112 TACCTGAAATTCTCCAGATAAAACTCTTCTCACATAAATATTACTTGTATAAGGCTCTAT 9171 Query 62447 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62506 || |||||||| || | |||||| ||||| || ||||| ||||| || | | | || Sbjct 9172 TGATTCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTTGGCATTGGAGAAATAAGCAA 9231 Query 62507 ACTATTTCTAAGACCGTAT 62525 ||||||||| | ||| ||| Sbjct 9232 ACTATTTCTTATACCATAT 9250 >seq55348 Length=21870 Score = 102 bits (112), Expect = 1e-16 Identities = 127/172 (74%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 62628 TATGTATCATATGGTCCT--TCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGT 62685 || || ||||||||||| | ||| | |||| || |||||| || ||||||||||| | Sbjct 9522 TAAGTTTCATATGGTCCAAATTCTTGT--GCTAATTCACAACTTGCTTCTAATGCACCAT 9465 Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745 ||||||| |||||||| || | | |||| | |||||||| |||||||| |||| Sbjct 9464 AATAAATAGTTTCAAAAATTTCAATGTTTAATTTCTGTGCTTCTTCACTATCAAAAGGAT 9405 Query 62746 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGG 62797 | | || |||||| | || |||||||||||||||| || || || || Sbjct 9404 ACCTCAAAGAAATAAATGTATCTGCTAATCCTTGAACACTTATTCCTATCGG 9353 >seq89448 Length=33718 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/112 (78%), Gaps = 3/112 (3%) Strand=Plus/Minus Query 28712 ACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATAAATATGTGTATTATCA 28771 |||||||||| || | ||| ||||| ||||| ||||| | ||||| ||| |||||| Sbjct 5355 ACCTGAGTTAATGCACGCCAGTCCATATTAGCACTTCCAATATAAAAATGCTGATTATCT 5296 Query 28772 GATATCCAAAATTTTGTATGAAGAACTCC---TCCTAGGATATTTGTAATAT 28820 |||||||||||||||||| |||||||| ||| || | ||||||| || Sbjct 5295 ATTATCCAAAATTTTGTATGGAGAACTCCACTTCCAAGAAGTTTTGTAAAAT 5244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629090097690240