Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq76348 167 2e-36 seq73121 131 2e-25 seq84422 109 5e-19 seq45383 86.0 6e-12 >seq76348 Length=48548 Score = 167 bits (184), Expect = 2e-36 Identities = 171/221 (77%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || |||||||| |||| |||||| ||||||||||| ||||||| ||||| |||||| Sbjct 25140 TCATCTCTACTGATTAATTCATTGCTGAATGTTAATCCAGGCATCAGTCCTCTCTTTTTT 25081 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||| ||||| || ||||||||||||||||| |||||||| || ||||| ||||||||| Sbjct 25080 AACCAGAATATTGCTGCAAATGAACCAGAAAAAAATATTCCTTCAACAGCAGCAAATGCT 25021 Query 11774 ACTACTCTTTCTCCATAT-ACCTTGTTGCTAGAT--ATCCATTTTCTGGCCCAATCAGCT 11830 || || | ||| ||| || |||| || ||||| ||| | |||||||||||| Sbjct 25020 ACAACACGTTCACCAAATGTGGAAGTTGAATCATTAATCCAATTTATTGCCCAATCAGCT 24961 Query 11831 TTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATAA 11871 || |||| || ||| || ||||| || || |||||||| Sbjct 24960 TTTCTTTTAACACATGGCAAAGTTTCAATTGCATTAAATAA 24920 Score = 122 bits (134), Expect = 8e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 12014 AAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAG 12073 ||||| ||||| || ||||||||||||| |||||||| |||| | |||| ||||| Sbjct 19923 AAATTTTCATTAACTATACCATCACTAGCAGCAAAAAAAGCTAAAACATGTGAAATAAAA 19864 Query 12074 TATTTTTCGTCTTTAGTTAATTTATCCCAATCATCTAAATCTTTTGATAAATCTACTTCT 12133 | |||||| |||| | | | ||||||| | | | |||||| || | |||||||||| Sbjct 19863 TGTTTTTCATCTTCATTCAGACGTTCCCAATGAACCATATCTTTAGAAAGATCTACTTCT 19804 Query 12134 TCAACGGTCCAAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTA 12193 || || ||||| || || | | || |||||||||| ||||||||| |||| | | Sbjct 19803 TCTACTGTCCAGAATGAAGCTTCAGCTTTCTTATACATTTGCCAGATATCTGGATATTCA 19744 Query 12194 ATAGGGAAAATAACGAA 12210 ||||| || || || || Sbjct 19743 ATAGGAAAGATGACAAA 19727 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 11461 TCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAGATC 11520 ||||||||| || ||||| ||||| | ||| | | ||||||||| || ||||| | Sbjct 25407 TCTATCTGCTACAAATTCAATATATCGTCTCATAAGATTACAATTCATTCCAATAAGTGC 25348 Query 11521 CACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTATCGA 11580 || |||| ||| |||| | ||| || | |||||| || ||||| ||||||| Sbjct 25347 AACAGGAAGAGCTTCTGTTAGAAATTCTTGTTCTATTACTACTGCATCTTTGATTATTTG 25288 Query 11581 CGTTATAACT---TCCTTAGATGGTGGATGTAATAAATGTTTAAACATTAAACACGCAAA 11637 ||||| | || || || ||| || || ||||| | ||||||||||| ||||| Sbjct 25287 ---TATAATTCTCTCTTTGGAGGGTTTATTTACCAAATGACTGAACATTAAACATGCAAA 25231 Query 11638 ATCACAATGTAAACC 11652 ||||||||| | ||| Sbjct 25230 ATCACAATGGAGACC 25216 Score = 84.2 bits (92), Expect = 2e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 11899 ATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAA 11958 ||| ||||| ||||| | |||||||||||||||||||| |||||| || | ||||| || Sbjct 21731 ATAAGTATCAATTAACAGACTATACATTTCTGAATGAACATTTTCTATTGAAATTTGGAA 21672 Query 11959 TCCATAGAAACATCGTGCCTC 11979 |||||| || || ||||| || Sbjct 21671 TCCATAAAAGCAGCGTGCTTC 21651 >seq73121 Length=35095 Score = 131 bits (144), Expect = 2e-25 Identities = 640/1005 (64%), Gaps = 24/1005 (2%) Strand=Plus/Plus Query 119755 GCTTTTGAAAAGTATACAAATGGATTATATGCAGAAATAAAATACGATGGTGAACGCGTT 119814 |||||| |||| | | ||||||| | ||||| ||||| ||||| ||||| || || ||| Sbjct 21156 GCTTTTAAAAAATGTCCAAATGGTATGTATGCTGAAATTAAATATGATGGAGAGCGTGTT 21215 Query 119815 CAAATTCATAAACAAAATAATACTTATGTATATTACAGTAGAAACCTAAAACAAGTATCT 119874 ||| ||||||| || | ||| | | ||||| ||| ||| |||||| |||| | Sbjct 21216 CAAGTTCATAAGAAAGGTGATAAATTTACATATTTTAGTCGAAGTTTAAAACCAGTA-CA 21274 Query 119875 ACAT-ATAAAATAGAGGGGTTCGATGATTGTTTATCTAAAGCTTTTC--CAACGGCTAAA 119931 ||| |||||||| || | || | || |||||||||||| ||| | ||| Sbjct 21275 ACAACATAAAATATCACATTTTAAAGACCATATAGCTAAAGCTTTTCATCAA--GGAAAA 21332 Query 119932 AACTTTATTTTAGATGCAGAACTTATATTAGTGGATaaaaaaaCAAATAACTTTTTGCCG 119991 | || ||| | ||| || || | || | |||| ||||||| | || ||| || Sbjct 21333 GATTTAATTCTTGATTGTGAGATTCTTCTATTAGATACAAAAACAGACAAACCTTTACCT 21392 Query 119992 TTTGGTTCATTAGGAGTACATAAAATGGCTTCGTATGAAAATTCTAGTCGATGTTTATTT 120051 ||||| | ||||| || ||||||| |||| | | | || || ||| | ||||| ||| Sbjct 21393 TTTGGAACTTTAGGTGTTCATAAAAAGGCTGCTTTTAAAGATGCTACTGTTTGTTTGTTT 21452 Query 120052 ATATTTGATTGTTTGTATTTTAACGATGAAAGTATTATACAC-AAACATTTTATTAAACG 120110 ||||||| ||| | |||| ||| | | || | | || || || | | ||| Sbjct 21453 GTATTTGACTGTATATATTATAATGGTAAAGATCTAATGGACTGTACTCTCAAAGAAAGA 21512 Query 120111 TAGACAATTAATCAGGGATAATATTTATGAAATTAGACATAAAATAATGCTATCCGATAT 120170 || |||| ||| || ||||| | ||| ||| | || | || | | || || || Sbjct 21513 AGGAAAATTCTTCA-AGAAAATATGCAAGAAGTTAAAGATCATATTAAATTTTCTGAAAT 21571 Query 120171 ACGTTGTATTAATAAAAAAGATGAATTAGATACATTTATAAAAGATGTTATACAAAAGGG 120230 | || || || | | | |||||| | | | ||||| || | || |||| Sbjct 21572 GAAATTAATCAAAAATAGAAAAGAATTAAGTGAAATGATAAATTTTGCCTTCAAACAGGG 21631 Query 120231 GCTGGAAGGACTCGTATTAAAAGGATTATATGATTCATATAAACCAGGAAATAAAGGTTG 120290 | ||||| || || || |||| || | | || |||||||| || ||| Sbjct 21632 ATTAGAAGGTCTTGTTTTGAAAGATCCATCAAGTACTTACAAACCAGGGAAACGTCATTG 21691 Query 120291 GTTGAAAATAAAGAAGGATTATATACTAAATGGATCTATAGCGGATTCCGTTGATTTAGT 120350 | | || | || || |||||| | | | || ||| || ||| | ||| ||||| Sbjct 21692 GCTTAAGGTGAAAAAAGATTATCTCCATGAAGGTAGTATGGCCGATAGTGCTGACTTAGT 21751 Query 120351 TGTGTTAGGATCATACTATGGAAAAGGGTCAAGGGGCGGCATTCAATCAATATTCTTAAT 120410 ||| ||||| |||| | ||| | || | || || || || || || || || Sbjct 21752 TGTTTTAGGTGCATATTTTGGTACTGGTAGCAAAGGAGGGATGATGTCTATTTTTTTGAT 21811 Query 120411 GGGATGTTACGATCCCAACGATTGTAAATGGAAAACGGTTACAAAATGTTC----AGGTC 120466 |||||||| ||| | |||||| || ||||| ||| || | ||| | Sbjct 21812 GGGATGTTTTGATAAGAGGTCCCAGAAATGGTGTACTGTTACTAAA-GTACATGGAGGAC 21870 Query 120467 ATGATGAAGAAACTCTAAAACAAATACAAGAGGAACTAGATGTTATTAAAATCAGTAAGG 120526 || ||| | | | || || || ||||| ||| |||| | ||||| ||| || Sbjct 21871 ATACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTTAAAGTCAATA--- 21927 Query 120527 ATGCATCGAAAATACCTAAGTGGTTAACTATAAATAAAGCATATTA-TCCTGATTTTATT 120585 ||| | | | || ||| | ||||| | | | || |||| | | | ||| |||||| || Sbjct 21928 ATGAAATGGATATTCCTGAATGGTTGAATGTTAA-AAAGTCTTTAATTCCCGATTTTGTT 21986 Query 120586 GTTAAAGATCCTAGATCTTCCCCGGTATGGGAAATTACGGGATCTGGTTTTACATCTTCA 120645 ||||||||| | | | || | || |||||||| || || | | ||| ||| | Sbjct 21987 TGTAAAGATCCAAAAACATCTCAAGTTTGGGAAATAACAGGTGCAGAATTT---TCTAAA 22043 Query 120646 AGTCAA---CATACAGCAAATGGAATATCTATACGTTTTCCTAGATTTGCAAGAATAAGA 120702 | || ||||| |||||||||||||| ||| | |||||| | || || ||| | Sbjct 22044 GCTGAAGCTCATACTGCAAATGGAATATCAATAAGATTTCCTCGTGTTACATTAATTCGT 22103 Query 120703 AATGATAAAAATTGGATATCTGCAACAAATCTACAAGAGTTGGAA 120747 |||||||| |||| | ||||| | | || |||| || ||| Sbjct 22104 TATGATAAATCATGGAAAGAAGCAACTACTTTAGAAGAATTAGAA 22148 >seq84422 Length=160705 Score = 109 bits (120), Expect = 5e-19 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 36864 CCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGT 36923 |||||| || ||||||||||| || |||||| | || | || | | | |||| || | Sbjct 8654 CCATCCATAGAAATGCATACTTGTTAGTTTTCCATAGTTTGGTTCAGCAATATGAATATT 8713 Query 36924 CATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTT 36983 | || || |||||||| || || || ||||| || || ||||||| || ||| |||| Sbjct 8714 TAACGACTGGCTTTGATCAATGAAAGCTCCTCTATCTGCAGCCATTTTTATAATGGATTT 8773 Query 36984 TTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTA 37021 ||||||||| |||||||| ||| | |||| || ||||| Sbjct 8774 TTGAGATATTTCCCAAACAGTTCTGTATAATTTTTTTA 8811 Score = 102 bits (112), Expect = 8e-17 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197 |||||||| ||||||||||| |||||||| ||| ||||| || ||||| || || || Sbjct 9113 ACCTGAAATTCTCCAGATAAAACTCTTCTCACATAAATATTACTTGTATAAGGCTCTATT 9172 Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGG 37257 || |||||||||| | ||||| | ||||| ||||| |||||||| | || || | Sbjct 9173 GATTCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTTGGCATTGGAGAAATAAGCAAA 9232 Query 37258 CTATTTCTCAATCCAT 37273 |||||||| | |||| Sbjct 9233 CTATTTCTTATACCAT 9248 Score = 102 bits (112), Expect = 8e-17 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 37401 TTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTGTTTCGAAAATTTGTAT 37460 ||| |||| || |||||| | ||||| || |||||||||||| || ||||||||||| Sbjct 10394 TTTTGCTAATTGGCAACTTGCTTCTAAAGCACTATAATATATTGTCTCAAAAATTTGTAT 10453 Query 37461 ATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGC 37520 || ||| | | ||| || || ||||| |||| ||| | || | ||||| |||||| Sbjct 10454 GTTCAATTTCTGTGCCTCATCACTATCAAATGGATATCTCATTTTAATAAAAGTATCAGC 10513 Query 37521 CAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGAT 37566 |||||| || || || || || || || | ||| ||| |||||| Sbjct 10514 CAAACCTTGCACTCCAATTCCAATAGGACGATGCCTCTGGTTAGAT 10559 >seq45383 Length=59856 Score = 86.0 bits (94), Expect = 6e-12 Identities = 165/241 (68%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 37926 TATATATAATTTGTTAAAATCATTCCCCCATACATC-GCATAATCCTGGACATTCGCATG 37984 |||||| || | | ||| || || |||||| || || ||| ||||||||| | Sbjct 54703 TATATACAAATCTTCAAATTCTTTACCCCATGTTTCAGCCAAATT-TGGACATTCATGAG 54645 Query 37985 GACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCC 38044 ||||||| | ||||| ||||| ||| || | | |||||||||||| || | || Sbjct 54644 GACACATCAATGACCACATATCATCAGCTTCAACTCTCTGCATAAATAAATCGGGAATCC 54585 Query 38045 ATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGC 38104 | | |||| ||||||||| || | ||||||| || || ||| ||| |||| Sbjct 54584 AAAGTGCATAAAATAAATCACGGGCACGGCATTCTTCTTTTCCAGTATTTTTTTTTAAAT 54525 Query 38105 TTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTC 38164 ||||| ||||| || || || ||||| ||||| | ||| || | | || ||||||| Sbjct 54524 CGAGAAATTCGAAAATGTCTGCATGCCAAGGTTCCAAATATATTGCAAAAGCACCTGGTC 54465 Query 38165 T 38165 | Sbjct 54464 T 54464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 467983607003520