Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq76348 143 3e-29 seq73121 141 1e-28 seq45383 136 5e-27 seq84422 122 1e-22 seq55348 102 1e-16 seq89448 96.9 5e-15 >seq76348 Length=48548 Score = 143 bits (158), Expect = 3e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 36542 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 36601 ||||||||||| ||||| || ||||| || |||||||| || || |||||| |||||| Sbjct 19923 AAATTTTCATTAACTATACCATCACTAGCAGCAAAAAAAGCTAAAACATGTGAAATAAAA 19864 Query 36602 TATTTTTCGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 36661 | |||||| | | | || | ||||| | ||||||||||| | ||| |||||| Sbjct 19863 TGTTTTTCATCTTCATTCAGACGTTCCCAATGAACCATATCTTTAGAAAGATCTACTTCT 19804 Query 36662 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGA 36721 || |||||||| ||||| || || || || |||||||| | |||||| || |||||| | Sbjct 19803 TCTACTGTCCAGAATGAAGCTTCAGCTTTCTTATACATTTGCCAGATATCTGGATATTCA 19744 Query 36722 ATTGGAAAAATAACAAA 36738 || ||||| || ||||| Sbjct 19743 ATAGGAAAGATGACAAA 19727 Score = 120 bits (132), Expect = 4e-22 Identities = 168/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 35950 AACATTATA--AAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCT 36007 ||||||||| || || || |||| |||||| | | ||||||||| |||||||| Sbjct 25448 AACATTATACAAACCTTATTGCATCCTAATTCAACTAGAAGTCTATCTGCTACAAATTCA 25389 Query 36008 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTA 36067 |||||| | |||| | | |||||||||||| |||||| ||| |||||||| | || Sbjct 25388 ATATATCGTCTCATAAGATTACAATTCATTCCAATAAGTGCAACAGGAAGAGCTTCTGTT 25329 Query 36068 AGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTC 36127 |||||||||||||| || || || ||| | || || ||| | | | |||| Sbjct 25328 AGAAATTCTTGTTCTATTACTACTGCATCTTTGATTATTTGTATAATTCTCTCTTTGGAG 25269 Query 36128 GGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCT 36182 ||| || | ||||| | ||||| |||||||| ||||| || || ||||||| Sbjct 25268 GGTTTATTTACCAAATGACTGAACATTAAACATGCAAAATCACAATGGAGACCCT 25214 Score = 98.7 bits (108), Expect = 1e-15 Identities = 109/146 (75%), Gaps = 3/146 (2%) Strand=Plus/Minus Query 35811 TTTAAAAATCAACATCTAGAGAAAAA---TGATTGTCTTCTTGAGACATAACTCCCATTT 35867 |||||||||| |||| | | |||| |||| |||| || | ||| ||||| || Sbjct 39504 TTTAAAAATCTGCATCAAATGTAAAACACTGATCTTCTTTTTTTGCCATCACTCCACATT 39445 Query 35868 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 35927 | || ||||| || || | |||||||||||| || ||||| ||||| | ||||||| || Sbjct 39444 TCTGATATTCTCCAACTCTTTTTTCGAAAAAGTTTGTTTTTCCTTCCAGAGATATATGTT 39385 Query 35928 CCATGAAATCGAATGGATTNNNAACA 35953 |||| ||||| |||||||| |||| Sbjct 39384 CCATAAAATCAAATGGATTTTCAACA 39359 Score = 89.7 bits (98), Expect = 7e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 36390 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 36449 ||||||||| | | | |||||| | |||| || ||| |||||||| || ||||||| Sbjct 21768 CATTAAAGAAAAATTACCTTTCATCAGGATCTGAAATATAAGTATCAATTAACAGACTAT 21709 Query 36450 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 36509 ||||||| ||||||| ||||| || | ||||| ||||| || || || | || || | Sbjct 21708 ACATTTCTGAATGAACATTTTCTATTGAAATTTGGAATCCATAAAAGCAGCGTGCTTCAG 21649 Query 36510 TAATCTGTACTTCT 36523 ||| || |||||| Sbjct 21648 TAACTTGAACTTCT 21635 >seq73121 Length=35095 Score = 141 bits (156), Expect = 1e-28 Identities = 683/1063 (64%), Gaps = 45/1063 (4%) Strand=Plus/Plus Query 158445 ATGACTCCAATTAATCCCATGTTAGCGGAATCGTGTGATTCTGTCAATAAGGCATTTAAA 158504 |||||||| ||| || ||| | || ||| | ||| ||| | | | || |||||| Sbjct 21105 ATGACTCCTATTCGACCAATGCTTGCTGAACCTTGTCGATCTATAGAATATGCTTTTAAA 21164 Query 158505 AAATTTCCATCAGGAATGTTTGCTGAAGTCAAATACGATGGCGAGAGAGTACAAGTTCAT 158564 |||| |||| || |||| ||||||| | ||||| ||||| ||| | || ||||||||| Sbjct 21165 AAATGTCCAAATGGTATGTATGCTGAAATTAAATATGATGGAGAGCGTGTTCAAGTTCAT 21224 Query 158565 AAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCTCTCATAAA 158624 || || | | | ||| | | |||||| ||| | |||||||||| |||||| Sbjct 21225 AAGAAAGGTGATAAATTTACATATTTTAGTCGAAGTTTAAAACCAGTACAACAACATAAA 21284 Query 158625 GTGGATTATCTCAAAGAATACATACCGAAAGCATTTAAAAAAGCTACGTCTATCGTATTG 158684 | || | ||||| | ||| | ||||| ||| | ||| | | | | | Sbjct 21285 ATATCACATTTTAAAGACCATATAGCTAAAGCTTTTCATCAAGGAAAAGATTTAATTCTT 21344 Query 158685 GATTCTGAAATTGTTCTTGTAGA--CGAACATA-ATGTACCGCTCCCGTTTGGAAGTTTA 158741 |||| ||| ||| |||| |||| | || | | | ||| | || ||||||| |||| Sbjct 21345 GATTGTGAGATTCTTCTATTAGATACAAAAACAGACAAACCTTTACCTTTTGGAACTTTA 21404 Query 158742 GGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGTTTGACTGT 158801 ||| | || |||||| | | |||| | ||| | |||||||| || ||||||||| Sbjct 21405 GGTGTTCATAAAAAGGCTGCTTTTAAAGATGCTACTGTTTGTTTGTTTGTATTTGACTGT 21464 Query 158802 TTGTACTTTGATGGATTCGATATGACGGACATTCCATTGTACGAACGAAGATCTTTTCTC 158861 | || | | |||| ||| | | |||| | | | | ||| |||| |||| Sbjct 21465 ATATATTATAATGGTAAAGATCTAATGGACTGTACTCTCAAAGAAAGAAGGAAAATTCTT 21524 Query 158862 AAAGATGTTATGGTCGAAATACCCAATAGAATAGTA----TTCTCAGAG----TTGACGA 158913 |||| |||| ||| | || | ||| || |||| | | || | | Sbjct 21525 CAAGAAAATATGCAAGAAGTTA--AAGATCATATTAAATTTTCTGAAATGAAATTAATCA 21582 Query 158914 ATATTAGTAACGAGTCTCAGTTAATTGATGTATTGGATGATGCACT-AACGAGAAAATTA 158972 | | ||| || || | | ||| || |||| ||| ||| | || || | ||| Sbjct 21583 AAAATAGAAAAGAAT-TAAGTGAAATGATAAATTT-----TGCCTTCAAACAGGGA-TTA 21635 Query 158973 GAAGGATTGGTCTTAAAAGATATTAATGGAGTA--TACGAACCGGGAAAGAGAAGATGGT 159030 ||||| | || || |||||| || |||| ||| |||| || || | ||| Sbjct 21636 GAAGGTCTTGTTTTGAAAGATCC--ATCAAGTACTTACAAACCAGGGAAACGTCATTGGC 21693 Query 159031 TAAAAATAAAGCGAGACTATTTGAACGAGGGTTCCATGGCAGATTCTGCCGATTTAGTAG 159090 | || | || ||| ||| | | || ||| ||||| ||| ||| || ||||| | Sbjct 21694 TTAAGGTGAAAAAAGATTATCTCCATGAAGGTAGTATGGCCGATAGTGCTGACTTAGTTG 21753 Query 159091 TACTAGGTGCTTACTATGGTAAAGG-ATCAAAGGGTGGTATTATGGCAGTCTTTTTAATG 159149 | ||||||| || | ||||| || | |||||| || || ||| | | ||||| ||| Sbjct 21754 TTTTAGGTGCATATTTTGGTACTGGTAGCAAAGGAGGG-ATGATGTCTATTTTTTTGATG 21812 Query 159150 GGTTGTTACGATGATGAATCCGGTAAATGGAAGACGGTAACTAAATGTTCA----GGACA 159205 || |||| ||| | ||| |||||| || || |||||| || || ||||| Sbjct 21813 GGATGTTTTGATAAGAGGTCCCAGAAATGGTGTACTGTTACTAAA-GTACATGGAGGACA 21871 Query 159206 CGATGATAATACGTTAAGGGTTTTGCAAGACCAATTAATGATGGTTAAAATTAACAAGGA 159265 |||| ||| || ||| ||||| ||||||||| | || || || Sbjct 21872 TACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTTAAAGTCAATAATGA 21931 Query 159266 TCCCaaaaaaaTTCCAGAGTGGTTGGTAGTTAATAAAATCTATA-TTCCCGATTTTGTA- 159323 | | ||||| || |||||| ||||| ||| ||| || ||||||||||||| Sbjct 21932 A---ATGGATATTCCTGAATGGTTGAATGTTAA-AAAGTCTTTAATTCCCGATTTTGTTT 21987 Query 159324 GTAGAGGATCCGAAACAATCTCAAATATGGGAAATTTCAGGAACAGAGTTTAC---ATCT 159380 ||| || |||| ||| ||||||| | |||||||| |||| |||| ||| | | || Sbjct 21988 GTAAAG-ATCCAAAAACATCTCAAGTTTGGGAAATAACAGGTGCAGAATTTTCTAAAGCT 22046 Query 159381 TCCAAGTCACATACAGCAAATGGAATATCGATTAGATTTCCTAGATTTACTAGGATTAGA 159440 ||| | ||||| |||||||||||||| || ||||||||| | |||| ||| | Sbjct 22047 G--AAG-CTCATACTGCAAATGGAATATCAATAAGATTTCCTCGTGTTACATTAATTCGT 22103 Query 159441 GAAGATAAAACGTGGAAAGAATCTACTCATCTAAACGATTTAG 159483 | |||||| | ||||||||| | ||| | || | || |||| Sbjct 22104 TATGATAAATCATGGAAAGAAGCAACTACTTTAGAAGAATTAG 22146 >seq45383 Length=59856 Score = 136 bits (150), Expect = 5e-27 Identities = 114/140 (81%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 66453 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 66512 |||||| | |||||||| | ||||| ||||| || ||||||||||||||||| | || Sbjct 46157 CTAGTTGCAGCATTAAAAAGAGTAGGTGAAGCATGTGTAAACCATTTTTCAGATAATAAT 46098 Query 66513 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 66572 || ||||||||||| || || || ||||| || ||| ||||||| || ||||||||| Sbjct 46097 TTATACGTCTCAATTGCAGAATCAATATCTTCTTTATGTATTCCTATGGCTACACGCATT 46038 Query 66573 AACATGTGCTGAGGTCTTTC 66592 ||||| |||||||||||||| Sbjct 46037 AACATATGCTGAGGTCTTTC 46018 Score = 107 bits (118), Expect = 3e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 66015 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 66074 |||||||||| ||||||||||| |||||| | ||| | | |||| | |||||| Sbjct 54657 GGACATTCATGAGGACACATCAATGACCACATATCATCAGCTTCAACTCTCTGCATAAAT 54598 Query 66075 AGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 66134 | ||| ||||||||||| || ||||||||| | || | ||| || ||||| ||| Sbjct 54597 AAATCGGGAATCCAAAGTGCATAAAATAAATCACGGGCACGGCATTCTTCTTTTCCAGTA 54538 Query 66135 TTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGC 66193 || ||||| | |||||| || | | ||| || |||||| |||||||| ||||| || Sbjct 54537 TTTTTTTTTAAATCGAGAAATTCGAAAATGTCTGCATGCCAAGGTTCCAAATATATTGC 54479 >seq84422 Length=160705 Score = 122 bits (134), Expect = 1e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 64907 CCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATT 64966 |||||| || ||||||||||| |||||||| ||| | || || || ||||| ||||| Sbjct 8654 CCATCCATAGAAATGCATACTTGTTAGTTTTCCATAGTTTGGTTCAGCAATATGAATATT 8713 Query 64967 CATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTT 65026 | || || |||||||| ||||| ||||| || ||||||||||||||||| || | || Sbjct 8714 TAACGACTGGCTTTGATCAATGAAAGCTCCTCTATCTGCAGCCATTTTTATAATGGATTT 8773 Query 65027 TTGTGGAATTTCCCAAATAGTT 65048 ||| | |||||||||| |||| Sbjct 8774 TTGAGATATTTCCCAAACAGTT 8795 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 65180 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 65239 ||| |||||||||||||| || ||||| | ||||||||||| ||||| || || | Sbjct 9112 TACCTGAAATTCTCCAGATAAAACTCTTCTCACATAAATATTACTTGTATAAGGCTCTAT 9171 Query 65240 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 65299 || |||||||| || | |||||| ||||| || ||||| ||||| || | | | || Sbjct 9172 TGATTCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTTGGCATTGGAGAAATAAGCAA 9231 Query 65300 ACTATTTCTAAGACCGTAT 65318 ||||||||| | ||| ||| Sbjct 9232 ACTATTTCTTATACCATAT 9250 >seq55348 Length=21870 Score = 102 bits (112), Expect = 1e-16 Identities = 127/172 (74%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 65421 TATGTATCGTATGGTCCT--TCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 65478 || || || |||||||| | ||| | |||| ||||||||| || ||||||||||| | Sbjct 9522 TAAGTTTCATATGGTCCAAATTCTTGT--GCTAATTCACAACTTGCTTCTAATGCACCAT 9465 Query 65479 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 65538 ||||||| ||||| || || | | |||| | |||||||| |||||||| |||| Sbjct 9464 AATAAATAGTTTCAAAAATTTCAATGTTTAATTTCTGTGCTTCTTCACTATCAAAAGGAT 9405 Query 65539 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 65590 | | || |||||| | ||||||||||||||||||| || || || || Sbjct 9404 ACCTCAAAGAAATAAATGTATCTGCTAATCCTTGAACACTTATTCCTATCGG 9353 >seq89448 Length=33718 Score = 96.9 bits (106), Expect = 5e-15 Identities = 89/112 (79%), Gaps = 3/112 (3%) Strand=Plus/Minus Query 31231 ACCTGAGTTAATGATCTCCAATCCATATTAGCGCTTCCTAAATAAATATGTGTATTATCA 31290 ||||||||||||| | ||| ||||||||||| ||||| | ||||| ||| |||||| Sbjct 5355 ACCTGAGTTAATGCACGCCAGTCCATATTAGCACTTCCAATATAAAAATGCTGATTATCT 5296 Query 31291 GATATCCAAAATTTTGTATGAAGAACTCC---TCCTAGGATATTTGTAATAT 31339 |||||||||||||||||| |||||||| ||| || | ||||||| || Sbjct 5295 ATTATCCAAAATTTTGTATGGAGAACTCCACTTCCAAGAAGTTTTGTAAAAT 5244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657412544598720