Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq76348 143 4e-29 seq73121 138 2e-27 seq45383 136 6e-27 seq84422 125 1e-23 seq55348 114 2e-20 seq89448 87.8 3e-12 >seq76348 Length=48548 Score = 143 bits (158), Expect = 4e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 50344 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 50403 ||||||||||| ||||| || ||||| || |||||||| || || |||||| |||||| Sbjct 19923 AAATTTTCATTAACTATACCATCACTAGCAGCAAAAAAAGCTAAAACATGTGAAATAAAA 19864 Query 50404 TGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCT 50463 |||||||| | | || | ||||| | ||||||||||| | |||||||||| Sbjct 19863 TGTTTTTCATCTTCATTCAGACGTTCCCAATGAACCATATCTTTAGAAAGATCTACTTCT 19804 Query 50464 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGG 50523 || |||||||| ||||| || || || || |||||||| | |||||| || |||||| Sbjct 19803 TCTACTGTCCAGAATGAAGCTTCAGCTTTCTTATACATTTGCCAGATATCTGGATATTCA 19744 Query 50524 ATTGGGAAAATAACAAATCTATTTGGATT 50552 || || || || ||||| | ||||||| Sbjct 19743 ATAGGAAAGATGACAAAACGTCTTGGATT 19715 Score = 120 bits (132), Expect = 4e-22 Identities = 168/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 49752 AACATTATA--AAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCT 49809 ||||||||| || || || |||| |||||| | | |||||| || |||||||| Sbjct 25448 AACATTATACAAACCTTATTGCATCCTAATTCAACTAGAAGTCTATCTGCTACAAATTCA 25389 Query 49810 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTA 49869 |||||| | |||| | | |||||||||||| |||||| ||| |||||||| | || Sbjct 25388 ATATATCGTCTCATAAGATTACAATTCATTCCAATAAGTGCAACAGGAAGAGCTTCTGTT 25329 Query 49870 AGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTC 49929 |||||||||||||| || ||| |||||| | || || | ||| | |||| Sbjct 25328 AGAAATTCTTGTTCTATTACTACTGCATCTTTGATTATTTGTATAATTCTCTCTTTGGAG 25269 Query 49930 GGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 49984 ||| || | ||||| | ||||| |||||||| ||||| || || ||||||| Sbjct 25268 GGTTTATTTACCAAATGACTGAACATTAAACATGCAAAATCACAATGGAGACCCT 25214 Score = 102 bits (112), Expect = 1e-16 Identities = 110/146 (75%), Gaps = 3/146 (2%) Strand=Plus/Minus Query 49613 TTTAAAAGTCAACATCTAGAGAAAAA---TGATTATCTTCTTGAGACATAACTCCCATTT 49669 ||||||| || |||| | | |||| |||| |||| || | ||| ||||| || Sbjct 39504 TTTAAAAATCTGCATCAAATGTAAAACACTGATCTTCTTTTTTTGCCATCACTCCACATT 39445 Query 49670 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 49729 | || ||||| || || | |||||||||||| || ||||||||||||| ||||||| || Sbjct 39444 TCTGATATTCTCCAACTCTTTTTTCGAAAAAGTTTGTTTTTCCTTCCAGAGATATATGTT 39385 Query 49730 CCATGAAATCAAACGGATTNNNAACA 49755 |||| |||||||| ||||| |||| Sbjct 39384 CCATAAAATCAAATGGATTTTCAACA 39359 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 50192 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTAT 50251 ||||||||| | | | |||||| | |||| || ||||||||| || || ||||||| Sbjct 21768 CATTAAAGAAAAATTACCTTTCATCAGGATCTGAAATATAAGTATCAATTAACAGACTAT 21709 Query 50252 ACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGG 50311 ||||||| ||||||| ||||| || | || || ||||| || || || | || || | Sbjct 21708 ACATTTCTGAATGAACATTTTCTATTGAAATTTGGAATCCATAAAAGCAGCGTGCTTCAG 21649 Query 50312 TAATCTGCACTTCT 50325 ||| || |||||| Sbjct 21648 TAACTTGAACTTCT 21635 >seq73121 Length=35095 Score = 138 bits (152), Expect = 2e-27 Identities = 670/1041 (64%), Gaps = 45/1041 (4%) Strand=Plus/Plus Query 173693 ATGACTCCAATTAATCCCATGTTAGCAGAATCATGTGATTCTGTCAATAAGGCGTTTAAA 173752 |||||||| ||| || ||| | || ||| | ||| ||| | | | || |||||| Sbjct 21105 ATGACTCCTATTCGACCAATGCTTGCTGAACCTTGTCGATCTATAGAATATGCTTTTAAA 21164 Query 173753 AAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTACAAGTTCAT 173812 |||| |||| || |||| ||| ||| | ||||| ||||| || | || ||||||||| Sbjct 21165 AAATGTCCAAATGGTATGTATGCTGAAATTAAATATGATGGAGAGCGTGTTCAAGTTCAT 21224 Query 173813 AAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCTCTCATAAA 173872 || || | | | ||| | | |||||| ||| | |||||||||| |||||| Sbjct 21225 AAGAAAGGTGATAAATTTACATATTTTAGTCGAAGTTTAAAACCAGTACAACAACATAAA 21284 Query 173873 GTGGATTATCTCAAAGAATACATACCGAAAGCATTTAAAAAAGCTACGTCTATCATATTG 173932 | || | ||||| | ||| | ||||| ||| | ||| | | | || | Sbjct 21285 ATATCACATTTTAAAGACCATATAGCTAAAGCTTTTCATCAAGGAAAAGATTTAATTCTT 21344 Query 173933 GATTCTGAAATTGTTCTTGTAGA--CGAACATA-ATGTACCGCTACCGTTTGGAAGTTTA 173989 |||| ||| ||| |||| |||| | || | | | ||| |||| ||||||| |||| Sbjct 21345 GATTGTGAGATTCTTCTATTAGATACAAAAACAGACAAACCTTTACCTTTTGGAACTTTA 21404 Query 173990 GGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGTTTGACTGT 174049 ||| | || |||||| | | |||| | ||| | |||||||| || ||||||||| Sbjct 21405 GGTGTTCATAAAAAGGCTGCTTTTAAAGATGCTACTGTTTGTTTGTTTGTATTTGACTGT 21464 Query 174050 TTGTACTTTGATGGATTCGATATGACGGACATTCCATTGTACGAACGAAGATCTTTTCTC 174109 | || | | |||| ||| | | |||| | | | | ||| |||| |||| Sbjct 21465 ATATATTATAATGGTAAAGATCTAATGGACTGTACTCTCAAAGAAAGAAGGAAAATTCTT 21524 Query 174110 AAAGATGTTATGGTTGAAATACCCAATAGAATAGTA----TTCTCAGAG----TTGACGA 174161 |||| |||| ||| | || | ||| || |||| | | || | | Sbjct 21525 CAAGAAAATATGCAAGAAGTTA--AAGATCATATTAAATTTTCTGAAATGAAATTAATCA 21582 Query 174162 ATATTAGTAACGAGTCTCAGTTAACTGACGTATTGGATGA-TGCACTAACAAGAAAATTA 174220 | | ||| || || | | ||| || ||| ||| || | || |||| | | ||| Sbjct 21583 AAAATAGAAAAGAAT-TAAGTGAAATGATAAATTT--TGCCTTCA--AACAGGGA--TTA 21635 Query 174221 GAAGGATTGGTCTTAAAAGATATTAATGGAGTA--TACGAACCGGGAAAGAGAAGATGGT 174278 ||||| | || || |||||| || |||| ||| |||| || || | ||| Sbjct 21636 GAAGGTCTTGTTTTGAAAGATCC--ATCAAGTACTTACAAACCAGGGAAACGTCATTGGC 21693 Query 174279 TAAAAATAAAGCGAGACTATTTGAACGAGGGTTCTATGGCAGATTCTGCAGATTTAGTAG 174338 | || | || ||| ||| | | || ||| |||||| ||| ||| || ||||| | Sbjct 21694 TTAAGGTGAAAAAAGATTATCTCCATGAAGGTAGTATGGCCGATAGTGCTGACTTAGTTG 21753 Query 174339 TACTAGGTGCTTACTATGGTAAAGG-AGCAAAGGGTGGTATCATGGCAGTCTTTCTAATG 174397 | ||||||| || | ||||| || |||||||| || || ||| | | ||| | ||| Sbjct 21754 TTTTAGGTGCATATTTTGGTACTGGTAGCAAAGGAGGG-ATGATGTCTATTTTTTTGATG 21812 Query 174398 GGTTGTTACGACGATGAATCCGGTAAATGGAAGACGGTAACTAAATGTTCC----GGACA 174453 || |||| || | ||| |||||| || || |||||| || | ||||| Sbjct 21813 GGATGTTTTGATAAGAGGTCCCAGAAATGGTGTACTGTTACTAAA-GTACATGGAGGACA 21871 Query 174454 CGATGATAATACGTTAAGAGTTTTGCAAGACCAATTAAAGATGATTAAAATTAACAAGGA 174513 |||| ||| | || ||| ||||| | ||| ||||| | || || || Sbjct 21872 TACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTTAAAGTCAATAATGA 21931 Query 174514 TCCCaaaaaaaTTCCAGAGTGGTTGGTAGTTAATAAAATCTATA-TTCCCGATTTTG-TA 174571 | | ||||| || |||||| ||||| ||| ||| || |||||||||||| | Sbjct 21932 A---ATGGATATTCCTGAATGGTTGAATGTTAA-AAAGTCTTTAATTCCCGATTTTGTTT 21987 Query 174572 GTAGAGGATCCAAAACAATCTCAGATATGGGAAATTTCAGGAGCAGAGTT---TACATCT 174628 ||| | ||||||||| |||||| | |||||||| |||| ||||| || || | || Sbjct 21988 GTA-AAGATCCAAAAACATCTCAAGTTTGGGAAATAACAGGTGCAGAATTTTCTAAAGCT 22046 Query 174629 TCCAAGTCACATACAGCGAATGGAATATCGATTAGATTTCCTAGATTTACTAGGATTAGA 174688 ||| | ||||| || ||||||||||| || ||||||||| | |||| ||| | Sbjct 22047 --GAAG-CTCATACTGCAAATGGAATATCAATAAGATTTCCTCGTGTTACATTAATTCGT 22103 Query 174689 GAAGATAAAACGTGGAAAGAA 174709 | |||||| | ||||||||| Sbjct 22104 TATGATAAATCATGGAAAGAA 22124 >seq45383 Length=59856 Score = 136 bits (150), Expect = 6e-27 Identities = 114/140 (81%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 80332 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGA 80391 |||||| | |||||||| | ||||| ||||| || ||||||||||||||||| | || Sbjct 46157 CTAGTTGCAGCATTAAAAAGAGTAGGTGAAGCATGTGTAAACCATTTTTCAGATAATAAT 46098 Query 80392 TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATT 80451 || ||||||||||| || || || ||||| || ||| ||||||| || ||||||||| Sbjct 46097 TTATACGTCTCAATTGCAGAATCAATATCTTCTTTATGTATTCCTATGGCTACACGCATT 46038 Query 80452 AACATGTGCTGAGGTCTTTC 80471 ||||| |||||||||||||| Sbjct 46037 AACATATGCTGAGGTCTTTC 46018 Score = 109 bits (120), Expect = 8e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 79894 GGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAG 79953 |||||||| | |||||||||||| |||||| ||||| | | |||| | |||||| Sbjct 54657 GGACATTCATGAGGACACATCAATGACCACATATCATCAGCTTCAACTCTCTGCATAAAT 54598 Query 79954 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTA 80013 | ||| ||||||||||| || ||||| ||| | || | || || ||||| ||| Sbjct 54597 AAATCGGGAATCCAAAGTGCATAAAATAAATCACGGGCACGGCATTCTTCTTTTCCAGTA 54538 Query 80014 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 80073 || ||||| | |||||| || | | ||| || | |||||| |||||||| ||||| || Sbjct 54537 TTTTTTTTTAAATCGAGAAATTCGAAAATGTCTGCATGCCAAGGTTCCAAATATATTGCA 54478 Query 80074 ATAACTCCCGGTC 80086 | | | || |||| Sbjct 54477 AAAGCACCTGGTC 54465 >seq84422 Length=160705 Score = 125 bits (138), Expect = 1e-23 Identities = 113/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 78786 CCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATT 78845 |||||| |||||||||||||| |||||||| ||| | || || || ||||| ||||| Sbjct 8654 CCATCCATAGAAATGCATACTTGTTAGTTTTCCATAGTTTGGTTCAGCAATATGAATATT 8713 Query 78846 CATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTT 78905 | || || |||||||| ||||| ||||| || ||||||||||||||||| || | || Sbjct 8714 TAACGACTGGCTTTGATCAATGAAAGCTCCTCTATCTGCAGCCATTTTTATAATGGATTT 8773 Query 78906 TTGTGGAATTTCCCAAATAGTT 78927 ||| | |||||||||| |||| Sbjct 8774 TTGAGATATTTCCCAAACAGTT 8795 Score = 102 bits (112), Expect = 1e-16 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 79059 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCAC 79118 ||| |||||||||||||| || ||||| | ||||||||||| ||||| || || | Sbjct 9112 TACCTGAAATTCTCCAGATAAAACTCTTCTCACATAAATATTACTTGTATAAGGCTCTAT 9171 Query 79119 CGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAA 79178 ||||||||||| || | |||||| ||||| || || |||||||| || | | | || Sbjct 9172 TGATTCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTTGGCATTGGAGAAATAAGCAA 9231 Query 79179 ACTATTTCTAAGACCGTAT 79197 ||||||||| | ||| ||| Sbjct 9232 ACTATTTCTTATACCATAT 9250 >seq55348 Length=21870 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 79299 GTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTA 79358 ||| |||||||| ||||| | || |||||||||||||| || |||||||| || || Sbjct 9523 GTAAGTTTCATATGGTCCAAATTCTTGTGCTAATTCACAACTTGCTTCTAATGCACCATA 9464 Query 79359 ATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATA 79418 |||||| ||||| ||||| | | || | | ||||||||| |||||||| ||||| Sbjct 9463 ATAAATAGTTTCAAAAATTTCAATGTTTAATTTCTGTGCTTCTTCACTATCAAAAGGATA 9404 Query 79419 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 79469 | || |||||| | ||||||||||||||||||| || || || || Sbjct 9403 CCTCAAAGAAATAAATGTATCTGCTAATCCTTGAACACTTATTCCTATCGG 9353 >seq89448 Length=33718 Score = 87.8 bits (96), Expect = 3e-12 Identities = 87/112 (78%), Gaps = 3/112 (3%) Strand=Plus/Minus Query 45006 ACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATAAATATGTGTATTATCG 45065 |||||||||| || | ||| ||||| ||||| ||||| | ||||| ||| |||||| Sbjct 5355 ACCTGAGTTAATGCACGCCAGTCCATATTAGCACTTCCAATATAAAAATGCTGATTATCT 5296 Query 45066 GATATCCAAAATTTTGTATGAAGAACTCC---TCCTAGGATATTTGTAATAT 45114 |||||||||||||||||| |||||||| ||| || | ||||||| || Sbjct 5295 ATTATCCAAAATTTTGTATGGAGAACTCCACTTCCAAGAAGTTTTGTAAAAT 5244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717439127709120