Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq76348 168 6e-37 seq73121 145 7e-30 >seq76348 Length=48548 Score = 168 bits (186), Expect = 6e-37 Identities = 177/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953 ||||||||||||| || | ||| || ||||||||||| ||||||| ||||| |||| Sbjct 25142 CCTCATCTCTACTGATTAATTCATTGCTGAATGTTAATCCAGGCATCAGTCCTCTCTTTT 25083 Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013 ||||||| |||||||| |||||||| || ||||| |||||||| ||||| |||||||| | Sbjct 25082 TTAACCAGAATATTGCTGCAAATGAACCAGAAAAAAATATTCCTTCAACAGCAGCAAATG 25023 Query 14014 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT-ATCCATTTTCTAGCCCATTCA 14072 ||| | ||||| ||||| | || || || | ||||| ||| | ||||| ||| Sbjct 25022 CTACAACACGTTCACCAAATG-TGGAAGTTGAATCATTAATCCAATTTATTGCCCAATCA 24964 Query 14073 GAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTC 14122 | |||| |||||| | | || |||||||| ||||||||||| | ||| Sbjct 24963 GCTTTTCTTTTAACACATGGCAAAGTTTCAATTGCATTAAATAACTTTTC 24914 Score = 134 bits (148), Expect = 1e-26 Identities = 149/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 14257 CCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14316 ||||||||||||||||||||||||||||||| |||||||| || || | | | ||||| Sbjct 19925 CCAAATTTTCATTAACTATACCATCACTAGCAGCAAAAAAAGCTAAAACATGTGAAATAA 19866 Query 14317 AGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTT 14376 | | || || || | || || || ||||| | ||| |||||||||||||||| Sbjct 19865 AATGTTTTTCATCTTCATTCAGACGTTCCCAATGAACCATATCTTTAGAAAGATCTACTT 19806 Query 14377 CATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14436 | || |||||||| || ||| ||||||| ||||||||| ||| || ||| |||| Sbjct 19805 CTTCTACTGTCCAGAATGAAGCTTCAGCTTTCTTATACATTTGCCAGATATCTGGATATT 19746 Query 14437 ATATAGGAAAAACTACAAA 14455 |||||||| | ||||| Sbjct 19745 CAATAGGAAAGATGACAAA 19727 Score = 127 bits (140), Expect = 2e-24 Identities = 111/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 13524 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGTTAGAAATAACGCCCATTTTT 13583 |||||||| |||| |||| |||| | ||| ||||| || | || || || ||| Sbjct 39502 TAAAAATCTGCATCAAATGTAAAACACTGATCTTCTTTTTTTGCCATCACTCCACATTTC 39443 Query 13584 TGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCC 13643 |||||||| | |||||||||||| || ||||| ||||| |||||||| ||||||| |||| Sbjct 39442 TGATATTCTCCAACTCTTTTTTCGAAAAAGTTTGTTTTTCCTTCCAGAGATATATGTTCC 39383 Query 13644 ATAAAATCAAATGGATTT 13661 |||||||||||||||||| Sbjct 39382 ATAAAATCAAATGGATTT 39365 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 13668 ATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATAT 13727 ||| | || |||| || |||| ||| | ||| | |||||| || | ||| ||||||||| Sbjct 25442 ATACAAACCTTATTGCATCCTAATTCAACTAGAAGTCTATCTGCTACAAATTCAATATAT 25383 Query 13728 TGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAAT 13787 | ||| | || ||||||||| || || ||| ||||||| | |||| |||| Sbjct 25382 CGTCTCATAAGATTACAATTCATTCCAATAAGTGCAACAGGAAGAGCTTCTGTTAGAAAT 25323 Query 13788 TCTTTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGA 13847 |||| |||||| || || ||||| || || | |||| |||| || || || | Sbjct 25322 TCTTGTTCTATTACTACTGCATCTTTGATTATTTGTATAATTCTCTCTTTGGAGGGTTTA 25263 Query 13848 TATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCT 13896 | | | ||| | || |||||||| |||||||||||||| || |||| Sbjct 25262 TTTACCAAATGACTGAACATTAAACATGCAAAATCACAATGGAGACCCT 25214 >seq73121 Length=35095 Score = 145 bits (160), Expect = 7e-30 Identities = 654/1020 (64%), Gaps = 30/1020 (3%) Strand=Plus/Plus Query 120512 ACTCCTGTAAAACCTATGCTAGCA-AACGTGTGTAAATCTAGTTATTATGCATTTAAAAA 120570 |||||| | ||| ||||| || ||| | ||| ||||| | ||||| |||||||| Sbjct 21108 ACTCCTATTCGACCAATGCTTGCTGAACCT-TGTCGATCTATAGAATATGCTTTTAAAAA 21166 Query 120571 GTATAAAGATGGAATCTGTGCAGAAATAAAGTACGATGGTGAACGAATTCAAATTCATAA 120630 | | | |||| || | ||| ||||| || || ||||| || || ||||| ||||||| Sbjct 21167 ATGTCCAAATGGTATGTATGCTGAAATTAAATATGATGGAGAGCGTGTTCAAGTTCATAA 21226 Query 120631 AGACAATAATTTATATAAATATTTTAGTAGAAATCTAAAACCAGTTTTATTTCATAAAAT 120690 | | || || || |||||||||| ||| | |||||||||| | |||||||| Sbjct 21227 GAAAGGTGATAAATTTACATATTTTAGTCGAAGTTTAAAACCAGTACAACAACATAAAAT 21286 Query 120691 AGAGGGATTTGATGAGTTTCTAACCAGCGCTTTCCCTTCAGCTAATAACTTTATTTTAGA 120750 | ||| | || | || | | ||||| | | || || | || ||| | || Sbjct 21287 ATCACATTTTAAAGACCATATAGCTAAAGCTTTTCATCAAGGAAAAGATTTAATTCTTGA 21346 Query 120751 TGCTGAATTAATATTAATTGATTTGAATACTAACAGATTTGTACCTTTTGGTTCATTAGG 120810 | ||| | | || | ||| || || ||| | | |||||||||| | ||||| Sbjct 21347 TTGTGAGATTCTTCTATTAGATACAAAAACAGACAAACCTTTACCTTTTGGAACTTTAGG 21406 Query 120811 TATAAATANNNNNNNNNNNTTTAAAAACTCTAGCACTTGTTTATTTGTCTTTGATTGTCT 120870 | | ||| |||||| | ||| |||||| ||||| ||||| ||| | Sbjct 21407 TGTTCATAAAAAGGCTGCTTTTAAAGATGCTACTGTTTGTTTGTTTGTATTTGACTGTAT 21466 Query 120871 ATTTTACAATAATGTAAGTTTAATGAGTCTGCCATTTGTTA-ATAGGAGAAAAATTATTG 120929 || ||| ||| | | | ||||| | ||| | | | | || || |||||| || Sbjct 21467 ATATTATAATGGTAAAGATCTAATG-GACTGTACTCTCAAAGAAAGAAGGAAAATTCTTC 21525 Query 120930 TTGATAATATCAATGAAATAAAAAATAAGGTTATGGTCTCAGAA--GCATTTTATGTGTA 120987 || ||||| | ||| | ||| || | ||| | || ||| | | || || | Sbjct 21526 AAGAAAATATGCAAGAAGTTAAAGATCATATTAAATTTTCTGAAATGAAATTAATCAAAA 21585 Query 120988 TAAAGAAAATGATTTAAATAAAATAATGGATGACGTTATTaaaaaaaaaCTAGAAGGGTT 121047 | |||||| || |||| | |||| || || | | ||| | | ||||||| | Sbjct 21586 -ATAGAAAA-GAATTAAGTGAAATGATAAATTTTGCCTTCAAACAGGGATTAGAAGGTCT 21643 Query 121048 GATATTAAAAGGAATAAAT--ATTAATTATGTACCTGGAAAAAGAGGTTGGTTAAAGATG 121105 | || |||| || || | || ||| ||| || ||| | |||| | ||| || Sbjct 21644 TGTTTTGAAAG--ATCCATCAAGTACTTACAAACCAGGGAAACGTCATTGGCTTAAGGTG 21701 Query 121106 AAGAAGGATTACTTAGATGATGGATCCATGGCAGATTCTGCAGACTTAGTAGTTTTAGGA 121165 || || ||||| | |||| || ||||| ||| ||| |||||||| |||||||| Sbjct 21702 AAAAAAGATTATCTCCATGAAGGTAGTATGGCCGATAGTGCTGACTTAGTTGTTTTAGGT 21761 Query 121166 TCATATTACGGTAAAGGGTCTAAGGGTGGTACACCATCAATATTTTTAATGGGGTGTTAT 121225 |||||| |||| || || || || | || || ||||| ||||| |||| | Sbjct 21762 GCATATTTTGGTACTGGTAGCAAAGGAGGGATGATGTCTATTTTTTTGATGGGATGTTTT 21821 Query 121226 GATAATGAAAGTA--ATAATTGGAAAACTGTAACTAAA-TGCTCCG--GACACAACGATG 121280 ||||| | || | || ||| ||||| |||||| | | | |||| | |||| Sbjct 21822 GATAAG--AGGTCCCAGAAATGGTGTACTGTTACTAAAGTACATGGAGGACATACTGATG 21879 Query 121281 ACACATtaaaaaaagtacaaaaagaaataaagtttttaaaaattagtaaagatacaaaaa 121340 ||| ||||| |||||| |||| || | | | ||| | | ||| || || Sbjct 21880 CAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTTAAAGTCAATAATGA---AATGG 21936 Query 121341 aaatcccaaaaTGGTTAATAGTAAATAAAATATATTAT-CCAGATTTTGTAGTTTGT--- 121396 | || || ||||||| | || || ||| | | | || || |||||||| |||| Sbjct 21937 ATATTCCTGAATGGTTGAATGTTAA-AAAGTCTTTAATTCCCGATTTTGT---TTGTAAA 21992 Query 121397 GATCCaaaaaaaTCACAGGTATGGGAAATATCCGGATCTAGTTTTACAAAATCTATACAT 121456 |||||||||| ||| || || ||||||||| | || | ||| | ||| || | | Sbjct 21993 GATCCAAAAACATCTCAAGTTTGGGAAATAACAGGTGCAGAATTTTCTAAAGCTGAAGCT 22052 Query 121457 CACACAGCAGATGGTATTTCAATAAGATTTCCTAGATTTaaaaaaaTTAGATATGATAAA 121516 || || ||| |||| || ||||||||||||||| | ||| | |||| | ||||||||| Sbjct 22053 CATACTGCAAATGGAATATCAATAAGATTTCCTCGTGTTACATTAATTCGTTATGATAAA 22112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479173866187200