Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq76348 159 3e-34 >seq76348 Length=48548 Score = 159 bits (176), Expect = 3e-34 Identities = 176/231 (76%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 ||||||||||||| || | ||| || ||||||||||| ||||||| ||||| |||| Sbjct 25142 CCTCATCTCTACTGATTAATTCATTGCTGAATGTTAATCCAGGCATCAGTCCTCTCTTTT 25083 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 ||||||| |||||||| || ||||| || ||||| |||||||| ||||| |||||||| | Sbjct 25082 TTAACCAGAATATTGCTGCAAATGAACCAGAAAAAAATATTCCTTCAACAGCAGCAAATG 25023 Query 13802 CTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGAT--ATCCATTTTCTAGCCCATTC 13859 ||| | ||||| ||||| | || ||| | || ||||| ||| | ||||| || Sbjct 25022 CTACAACACGTTCACCAAATG-TG-GAAGTTGAATCATTAATCCAATTTATTGCCCAATC 24965 Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTC 13910 || |||| |||||| | | || ||||| |||||||| ||||| | ||| Sbjct 24964 AGCTTTTCTTTTAACACATGGCAAAGTTTCAATTGCATTAAATAACTTTTC 24914 Score = 129 bits (142), Expect = 6e-25 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 14045 CCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAA 14104 |||| ||||||||||| |||||||||||||| |||||||| || || | | | ||||| Sbjct 19925 CCAAATTTTCATTAACTATACCATCACTAGCAGCAAAAAAAGCTAAAACATGTGAAATAA 19866 Query 14105 AGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTT 14164 | | || || || | || || || ||||| | | ||| |||||||||||||||| Sbjct 19865 AATGTTTTTCATCTTCATTCAGACGTTCCCAATGAACCATATCTTTAGAAAGATCTACTT 19806 Query 14165 CATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATA 14224 | || |||||||| || ||| ||||||| ||||||||| ||| || ||| |||| Sbjct 19805 CTTCTACTGTCCAGAATGAAGCTTCAGCTTTCTTATACATTTGCCAGATATCTGGATATT 19746 Query 14225 ATATAGGAAAAACTACAAA 14243 |||||||| | ||||| Sbjct 19745 CAATAGGAAAGATGACAAA 19727 Score = 127 bits (140), Expect = 2e-24 Identities = 111/138 (80%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 13312 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGTTAGAAATAACGCCCATTTTT 13371 |||||||| |||| |||| |||| | ||| ||||| || | || || || ||| Sbjct 39502 TAAAAATCTGCATCAAATGTAAAACACTGATCTTCTTTTTTTGCCATCACTCCACATTTC 39443 Query 13372 TGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCC 13431 |||||||| | |||||||||||| |||||||| ||||| |||||||| ||||||| |||| Sbjct 39442 TGATATTCTCCAACTCTTTTTTCGAAAAAGTTTGTTTTTCCTTCCAGAGATATATGTTCC 39383 Query 13432 ATAAAATCGAATGGATTT 13449 |||||||| ||||||||| Sbjct 39382 ATAAAATCAAATGGATTT 39365 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 13456 ATAAACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATAT 13515 ||| | || |||| || |||| ||| | || | |||||| || | ||| ||||||||| Sbjct 25442 ATACAAACCTTATTGCATCCTAATTCAACTAGAAGTCTATCTGCTACAAATTCAATATAT 25383 Query 13516 TGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAAT 13575 | ||| | || ||||||||| || || ||| ||||||| | |||| |||| Sbjct 25382 CGTCTCATAAGATTACAATTCATTCCAATAAGTGCAACAGGAAGAGCTTCTGTTAGAAAT 25323 Query 13576 TCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGA 13635 |||| |||||| || || || || || || |||| | || || || || | Sbjct 25322 TCTTGTTCTATTACTACTGCATCTTTGATTATTTGTATAATTCTCTCTTTGGAGGGTTTA 25263 Query 13636 TATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCT 13684 | | | ||| | || |||||||| |||||||||||||| || |||| Sbjct 25262 TTTACCAAATGACTGAACATTAAACATGCAAAATCACAATGGAGACCCT 25214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478035982077120