Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq85547 116 3e-21 seq76947 113 3e-20 seq73005 84.2 2e-11 >seq85547 Length=49496 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 |||||||| | || ||||| ||||| ||||| | || ||||||||||| || |||||| Sbjct 24403 TCCTTTTGAATGTTATAATCAGACAAAGTACGCCCATCTTCCAATTGTTTCCCAGCAAAA 24344 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 ||||||| ||||||||| | || | ||||||||| || || |||| || | Sbjct 24343 ATCAATCTCTGTTGATCTGGTGGTATACCTTCTTTATCTTGAATTTTTGCTTTCACGTTT 24284 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 ||| ||| || | | || || || | || |||||||| || || || || |||||| Sbjct 24283 TCAATTGTATCACTTGGTTCAACTTCCAAAGTGATAGTTTTCCCAGTGAGGGTCTTCACA 24224 Query 43099 AAAATTTGCATT 43110 |||||||||||| Sbjct 24223 AAAATTTGCATT 24212 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| ||||| | ||||||||||| ||| ||||| || | ||| ||||| || Sbjct 24211 CCACCACGAAGTCTAAGCACCAAATGGAGAGTAGATTCCTTCTGGATATTATAATCAGAT 24152 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || || | || || ||||||||||| ||||||||||| ||||| ||||| | || Sbjct 24151 AAAGTGCGACCATCTTCTAATTGTTTGCCAGCAAAAATCAAACGCTGCTGATCAGGAGGG 24092 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || ||| |||| || | | | ||||| | | ||| || Sbjct 24091 ATTCCTTCCTTATCTTGAATCTTAGCTTTTACATTCTCGATGGTGTCACTTGGCTCTACT 24032 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || ||||| || || || | |||||| || ||||| ||||| Sbjct 24031 TCCAAAGTGATAGTCTTCCCAGTCAAAGTTTTAACGAAAATCTGCAT 23985 Score = 100 bits (110), Expect = 2e-16 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 |||||||| | ||| ||||| || || || ||| | || || || |||||||| ||||| Sbjct 24631 TCCTTTTGAATATTATAATCTGATAAGGTGCGTCCATCTTCTAACTGTTTGCCTGCAAAG 24572 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGA---TCAACTCTTTGACT 43035 ||||| ||||||||||||| || | |||||||| || ||| | | || || | | Sbjct 24571 ATCAAACGCTGTTGATCGGGAGGAATTCCTTCTTTATC-TTGAATTTTAGCTTTTACATT 24513 Query 43036 CTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTC 43095 || ||| ||||| | | ||| || || | || || || || || |||| ||||| Sbjct 24512 CT--CAATGGTGTCACTTGGCTCCACTTCCAAGGTGATGGTCTTCCCTGTTAATGTTTTA 24455 Query 43096 ACAAAAATTTGCATT 43110 |||||||| |||||| Sbjct 24454 ACAAAAATCTGCATT 24440 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 || ||||| | || ||||| ||||| | ||| ||||| || | ||||| | || ||| Sbjct 24877 ACTAAATGTAAGGTACTCTCTTTTTGAATATTATAATCCGAAAGAGTACGACCATCTTCC 24818 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 | ||||||||| ||||| || | || ||||||||| | || | ||||| || || | Sbjct 24817 AGTTGTTTGCCAGCAAAGATGAGTCTCTGTTGATCAGGTGGAATGCCTTCCTTATCTTGG 24758 Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTT 43080 || |||| || | ||| || || | | || || || | || || ||||| Sbjct 24757 ATTTTAGCTTTCACATTTTCAATGGTATCACTGGGTTCCACTTCCAGAGTAATTGTTTTC 24698 Query 43081 CCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || |||| ||||| ||||||||||||||| Sbjct 24697 CCTGTTAATGTTTTAACAAAAATTTGCATT 24668 >seq76947 Length=48948 Score = 113 bits (124), Expect = 3e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 |||||||||| ||| || || | || | || || ||||| || | ||||||||| || Sbjct 23721 CCTCCACGCAATCTCAATACAAGGTGAAGTGTACTTTCCTTCTGGATATTGTAATCTGAA 23780 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | |||||| | || || ||||| || || |||||||| |||| ||| ||||| | || Sbjct 23781 AGGGTACGTCCATCTTCTAATTGCTTTCCAGCAAAAATTAATCTCTGCTGATCAGGAGGA 23840 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||||| || ||| |||| || | ||| ||||| | | || || Sbjct 23841 ATTCCTTCTTTATCTTGGATTTTAGCTTTTACATTCTCAATGGTGTCACTTGGTTCCACT 23900 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 |||| || ||||||||||| || || ||||| ||||| || ||||| || Sbjct 23901 TCTAAAGTGATAGTTTTTCCAGTAAGGGTTTTTACAAATATCTGCATGTT 23950 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || || ||||| | ||||||||| | ||| ||||||||| | ||||| || || Sbjct 23493 CCACCTCGAAGTCTCAGCACCAAATGAAGAGTAGACTCCTTTTGTATGTTGTAGTCTGAG 23552 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | |||||| | || |||| || || || ||||||||||| ||||| ||||| | || Sbjct 23553 AGTGTACGACCATCTTCCAGCTGCTTTCCTGCAAAAATCAAACGCTGCTGATCTGGAGGA 23612 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||| || || |||| | || || | ||| || || | | ||| || Sbjct 23613 ATACCTTCCTTATCTTGGATCTTTGCCTTCACATTTTCAATAGTATCACTGGGCTCTACT 23672 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || | || || |||||||| || || || |||||||| || |||||| Sbjct 23673 TCCAAAGTGATGGTTTTTCCAGTGAGTGTCTTCACAAAGATCTGCATT 23720 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 || ||||| | ||| ||||| || | ||| || || || | || || | || || Sbjct 22599 ACTAAATGTAGAGTAGATTCCTTCTGAATATTATAGTCCGAGAGAGTGCGGCCATCCTCT 22658 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 |||||||| || |||||||||| || ||||||||||| || | |||||||| || ||| Sbjct 22659 AATTGTTTACCTGCAAAAATCAGTCTCTGTTGATCGGGAGGAATTCCTTCTTTATC-CTG 22717 Query 43021 -ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTT 43079 || ||||||| | ||| || || | | || || || | || || ||||| Sbjct 22718 AATTTTTGCTTTGACATTTTCAATAGTATCACTTGGTTCTACTTCCAAAGTAATGGTTTT 22777 Query 43080 TCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 ||||||| ||||| ||||| |||||||| Sbjct 22778 CCCGGTTAATGTTTTTACAAATATTTGCAT 22807 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| ||||| | |||| ||| | || |||||||| | ||| ||||| ||| Sbjct 23265 CCACCACGAAGTCTGAGTACCAGATGAAGTGTTGATTCCTTTTGAATATTATAATCTGAC 23324 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || || | || |||| ||| || || ||||| || | |||||||||||| | || Sbjct 23325 AGAGTGCGACCATCTTCCAGTTGCTTACCAGCAAAGATAAGTCGCTGTTGATCAGGTGGA 23384 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||||| || || | || || | ||| |||||| | | || || Sbjct 23385 ATTCCTTCTTTGTCTTGAATTTTTGCCTTTACATTTTCAATTGTGTCACTTGGTTCCACT 23444 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || ||||| || || || || |||||||| |||||||| Sbjct 23445 TCCAGAGTGATTGTTTTACCAGTGAGTGTCTTCACAAAGATTTGCAT 23491 >seq73005 Length=127446 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||||||||| | || | ||| | ||| || || || | || || || ||| Sbjct 44168 CCACCACGCAGTCTAAGAACAAGATGCAAGGTGGATTCTTTCTGAATGTTATAGTCTGAC 44109 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || || ||| | || ||||| ||||| || |||||||| || | ||| ||||| | || Sbjct 44108 AAGGTGCGTCCATCTTCCAACTGTTTTCCTGCAAAAATTAACCTCTGCTGATCTGGTGGA 44049 Query 43003 ACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | |||||| || || ||| || |||| || | | | ||||||| | ||| || Sbjct 44048 ATACCTTCCTTGTC-CTGAATTTTGGCTTTTACGTTTTCTATGGTGTCGCTCGGCTCTAC 43990 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || || || || || || || || || |||||||| ||||| Sbjct 43989 TTCTAATGTGATGGTCTTGCCAGTCAGTGTCTTAACAAAAATCTGCAT 43942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380940092975664