Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq76348 152 7e-32 seq45383 145 1e-29 seq84422 134 2e-26 seq73121 131 2e-25 seq55348 104 3e-17 seq89448 87.8 2e-12 >seq76348 Length=48548 Score = 152 bits (168), Expect = 7e-32 Identities = 162/214 (76%), Gaps = 10/214 (5%) Strand=Plus/Minus Query 42449 AAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 42508 |||||||| || ||||| || ||||| || |||||||| || || |||||| |||||| Sbjct 19923 AAATTTTCATTAACTATACCATCACTAGCAGCAAAAAAAGCTAAAACATGTGAAATAAAA 19864 Query 42509 TATTTTTCGTCCGGTGTTAATTTA-----TTCCAATCATTGATATCTTTAGATATATCTA 42563 | |||||| || || ||| | | ||||| | ||||||||||| | ||||| Sbjct 19863 TGTTTTTCATC-----TTCATTCAGACGTTCCCAATGAACCATATCTTTAGAAAGATCTA 19809 Query 42564 CTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGAT 42623 |||||||||| ||||| ||||| ||||| || || |||||||| | ||||||||| ||| Sbjct 19808 CTTCTTCTACTGTCCAGAATGAAGCTTCAGCTTTCTTATACATTTGCCAGATATCTGGAT 19749 Query 42624 ATTGAATTGGGAAAATAACAAATCTATTTGGATT 42657 ||| ||| || || || ||||| | ||||||| Sbjct 19748 ATTCAATAGGAAAGATGACAAAACGTCTTGGATT 19715 Score = 129 bits (142), Expect = 8e-25 Identities = 161/220 (73%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 ||||||||||||| |||||||| ||| || || | ||| ||||| || || | ||||| Sbjct 25142 CCTCATCTCTACTGATTAATTCATTGCTGAATGTTAATCCAGGCATCAGTCCTCTCTTTT 25083 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | | ||| ||||| | |||||||| |||||||| || |||||||| || || ||||| | Sbjct 25082 TTAACCAGAATATTGCTGCAAATGAACCAGAAAAAAATATTCCTTCAACAGCAGCAAATG 25023 Query 42207 CAATAAGTCTCTCTCCATAACCGGCACT---GTCATGTATCCACTTTTGAGCCCAATCGG 42263 | | || | || ||| | || | | |||| ||||| ||| |||||||| | Sbjct 25022 CTACAACACGTTCACCAAATGTGGAAGTTGAATCATTAATCCAATTTATTGCCCAATCAG 24963 Query 42264 CCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 42303 | || |||| ||||| |||| ||||| || |||||||| Sbjct 24962 CTTTTCTTTTAACACATGGCAAAGTTTCAATTGCATTAAA 24923 Score = 105 bits (116), Expect = 9e-18 Identities = 165/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 41857 AACATTATA--AAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCT 41914 ||||||||| || || || |||| |||||| | | ||||||||| | ||||| Sbjct 25448 AACATTATACAAACCTTATTGCATCCTAATTCAACTAGAAGTCTATCTGCTACAAATTCA 25389 Query 41915 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTA 41974 |||||| | |||| | | |||||||||||| |||||| ||| |||||||| | || Sbjct 25388 ATATATCGTCTCATAAGATTACAATTCATTCCAATAAGTGCAACAGGAAGAGCTTCTGTT 25329 Query 41975 AGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTC 42034 |||||||||||||| || || || ||| | || || | | | | | |||| Sbjct 25328 AGAAATTCTTGTTCTATTACTACTGCATCTTTGATTATTTGTATAATTCTCTCTTTGGAG 25269 Query 42035 GGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 42089 ||| || | ||||| | ||||| |||||||| ||||| || || ||||||| Sbjct 25268 GGTTTATTTACCAAATGACTGAACATTAAACATGCAAAATCACAATGGAGACCCT 25214 Score = 102 bits (112), Expect = 1e-16 Identities = 110/146 (75%), Gaps = 3/146 (2%) Strand=Plus/Minus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAA---TGATTGTCTTCTTGAGACATAACTCCCATTT 41774 ||||||| || |||| || | |||| |||| |||| || | ||| ||||| || Sbjct 39504 TTTAAAAATCTGCATCAAATGTAAAACACTGATCTTCTTTTTTTGCCATCACTCCACATT 39445 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834 | || ||||| || || | |||||||||||| || || |||||||||| ||||||| || Sbjct 39444 TCTGATATTCTCCAACTCTTTTTTCGAAAAAGTTTGTTTTTCCTTCCAGAGATATATGTT 39385 Query 41835 CCATGAAATCAAACGGATTNNNAACA 41860 |||| |||||||| ||||| |||| Sbjct 39384 CCATAAAATCAAATGGATTTTCAACA 39359 Score = 89.7 bits (98), Expect = 7e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 42297 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTAT 42356 ||||||||| | | | |||||| | |||| || ||| ||||| || || ||||||| Sbjct 21768 CATTAAAGAAAAATTACCTTTCATCAGGATCTGAAATATAAGTATCAATTAACAGACTAT 21709 Query 42357 ACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGG 42416 ||||||||||||||| ||||| || | || || ||||| || || || | || || | Sbjct 21708 ACATTTCTGAATGAACATTTTCTATTGAAATTTGGAATCCATAAAAGCAGCGTGCTTCAG 21649 Query 42417 TAACCTGTACTTCT 42430 |||| || |||||| Sbjct 21648 TAACTTGAACTTCT 21635 >seq45383 Length=59856 Score = 145 bits (160), Expect = 1e-29 Identities = 116/140 (83%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 72415 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGA 72474 |||||| | |||||||| | ||||| ||||| || ||||||||||||||||| | || Sbjct 46157 CTAGTTGCAGCATTAAAAAGAGTAGGTGAAGCATGTGTAAACCATTTTTCAGATAATAAT 46098 Query 72475 TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATT 72534 || ||||||||||| || || || ||||| || ||||||||||| || ||||||||| Sbjct 46097 TTATACGTCTCAATTGCAGAATCAATATCTTCTTTATGTATTCCTATGGCTACACGCATT 46038 Query 72535 AACATATGCTGAGGTCTTTC 72554 |||||||||||||||||||| Sbjct 46037 AACATATGCTGAGGTCTTTC 46018 Score = 111 bits (122), Expect = 2e-19 Identities = 132/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 71977 GGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAG 72036 |||||||||| |||||||||||||||||| ||||| | | |||| | |||||| Sbjct 54657 GGACATTCATGAGGACACATCAATGACCACATATCATCAGCTTCAACTCTCTGCATAAAT 54598 Query 72037 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTA 72096 | ||| ||||||||||| || ||||| ||| | || | || || ||||| ||| Sbjct 54597 AAATCGGGAATCCAAAGTGCATAAAATAAATCACGGGCACGGCATTCTTCTTTTCCAGTA 54538 Query 72097 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 72155 || ||||| | |||||| || | | ||| || | |||||| |||||||| ||||| || Sbjct 54537 TTTTTTTTTAAATCGAGAAATTCGAAAATGTCTGCATGCCAAGGTTCCAAATATATTGC 54479 >seq84422 Length=160705 Score = 134 bits (148), Expect = 2e-26 Identities = 115/142 (81%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 70869 CCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATATT 70928 |||||| || ||||||||||| |||||||| |||| | || || || || |||||||| Sbjct 8654 CCATCCATAGAAATGCATACTTGTTAGTTTTCCATAGTTTGGTTCAGCAATATGAATATT 8713 Query 70929 CATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTT 70988 | |||||| |||||||| ||||| ||||| || ||||||||||||||||| || | || Sbjct 8714 TAACGACTGGCTTTGATCAATGAAAGCTCCTCTATCTGCAGCCATTTTTATAATGGATTT 8773 Query 70989 TTGTGGAATTTCCCAAATAGTT 71010 ||| | |||||||||| |||| Sbjct 8774 TTGAGATATTTCCCAAACAGTT 8795 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 71142 TACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCAC 71201 ||| |||||||||||||| || ||||| | ||||||||||| ||||| || || | Sbjct 9112 TACCTGAAATTCTCCAGATAAAACTCTTCTCACATAAATATTACTTGTATAAGGCTCTAT 9171 Query 71202 TGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAG 71261 ||| |||||||| || | |||||| ||||| || ||||| ||||| || | | | | Sbjct 9172 TGATTCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTTGGCATTGGAGAAATAAGCAA 9231 Query 71262 ACTATTTCTAAGACCAT 71278 ||||||||| | ||||| Sbjct 9232 ACTATTTCTTATACCAT 9248 Score = 86.0 bits (94), Expect = 8e-12 Identities = 142/204 (70%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 71373 TGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAA 71432 ||||||| |||| ||| || || |||| || || |||| || ||||| || ||||| Sbjct 10361 TGATCCTTCATACGTAGAATAAGGACCTTTTTCTTTTGCTAATTGGCAACTTGCTTCTAA 10420 Query 71433 TGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATC 71492 || | |||||| || || || ||||| | | || | | ||||| || ||||| Sbjct 10421 AGCACTATAATATATTGTCTCAAAAATTTGTATGTTCAATTTCTGTGCCTCATCACTATC 10480 Query 71493 AAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGG 71552 ||||||||| | | |||||| | || || || ||||| || ||||| || ||||| Sbjct 10481 AAATGGATATCTCATTTTAATAAAAGTATCAGCCAAACCTTGCACTCCAATTCCAATAGG 10540 Query 71553 TCTGTGTCTCTTATTAGA-AATTT 71575 | || |||| ||||| ||||| Sbjct 10541 ACGATGCCTCTGGTTAGATAATTT 10564 >seq73121 Length=35095 Score = 131 bits (144), Expect = 2e-25 Identities = 682/1064 (64%), Gaps = 47/1064 (4%) Strand=Plus/Plus Query 165042 ATGACTCCAATTAATCCCATGTTAGCGGAATCGTGTGATTCTGTCAATAAGGCGTTTAAA 165101 |||||||| ||| || ||| | || ||| | ||| ||| | | | || |||||| Sbjct 21105 ATGACTCCTATTCGACCAATGCTTGCTGAACCTTGTCGATCTATAGAATATGCTTTTAAA 21164 Query 165102 AAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTACAAGTTCAT 165161 |||| |||| || |||| ||| ||| | ||||| ||||| || | || ||||||||| Sbjct 21165 AAATGTCCAAATGGTATGTATGCTGAAATTAAATATGATGGAGAGCGTGTTCAAGTTCAT 21224 Query 165162 aaaaaaaaTAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCTCTCATAAA 165221 || ||| | | | ||| | | |||||| ||| | |||||||||| |||||| Sbjct 21225 AAGAAAGGTGATAAATTTACATATTTTAGTCGAAGTTTAAAACCAGTACAACAACATAAA 21284 Query 165222 GTGGATTATCTCAAAGAATACATACCGAAAGCATTTAAAAAAGCTACGTCTATCGTATTG 165281 | || | ||||| | ||| | ||||| ||| | ||| | | | | | Sbjct 21285 ATATCACATTTTAAAGACCATATAGCTAAAGCTTTTCATCAAGGAAAAGATTTAATTCTT 21344 Query 165282 GATTCTGAAATTGTTCTTGTAGA--CGAACATA-ATGTACCGCTACCGTTTGGAAGTTTA 165338 |||| ||| ||| |||| |||| | || | | | ||| |||| ||||||| |||| Sbjct 21345 GATTGTGAGATTCTTCTATTAGATACAAAAACAGACAAACCTTTACCTTTTGGAACTTTA 21404 Query 165339 GGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGTTTGACTGT 165398 ||| | || |||||| | | |||| | ||| | |||||||| || ||||||||| Sbjct 21405 GGTGTTCATAAAAAGGCTGCTTTTAAAGATGCTACTGTTTGTTTGTTTGTATTTGACTGT 21464 Query 165399 TTGCACTTTGATGGATTCGATATGACGGACATTCCATTGTACGAACGAAGATCTTTTCTC 165458 | | | | |||| ||| | | |||| | | | | ||| |||| |||| Sbjct 21465 ATATATTATAATGGTAAAGATCTAATGGACTGTACTCTCAAAGAAAGAAGGAAAATTCTT 21524 Query 165459 AAAGATGTTATGGTCGAAATACCCAATAGAATAGTA--TTCTCAGAGTTGAC--TAAT-- 165512 |||| |||| ||| | || | ||| || || || || ||| |||| Sbjct 21525 CAAGAAAATATGCAAGAAGTTA--AAGATCATATTAAATTTTCTGAAATGAAATTAATCA 21582 Query 165513 --ATTAGTAACGAGTCTCAGTTAACCGATGTATTGGATGATGCACT-AACGAGAAAATTA 165569 | ||| || || | | ||| || ||| ||| ||| | || || | ||| Sbjct 21583 AAAATAGAAAAGAAT-TAAGTGAAATGATAAATTT-----TGCCTTCAAACAGGGA-TTA 21635 Query 165570 GAAGGATTGGTCTTAAAAGATATTAATGGAGTA--TACGAACCGGGAAAGAGAAGATGGT 165627 ||||| | || || |||||| || |||| ||| |||| || || | ||| Sbjct 21636 GAAGGTCTTGTTTTGAAAGATCC--ATCAAGTACTTACAAACCAGGGAAACGTCATTGGC 21693 Query 165628 TAAAAATAAAGCGAGACTATTTGAACGAGGGTTCCATGGCAGATTCTGCCGATTTAGTAG 165687 | || | || ||| ||| | | || ||| ||||| ||| ||| || ||||| | Sbjct 21694 TTAAGGTGAAAAAAGATTATCTCCATGAAGGTAGTATGGCCGATAGTGCTGACTTAGTTG 21753 Query 165688 TACTAGGTGCTTACTATGGTAAAGG-AGCAAAGGGTGGTATCATGGCAGTCTTTCTAATG 165746 | ||||||| || | ||||| || |||||||| || || ||| | | ||| | ||| Sbjct 21754 TTTTAGGTGCATATTTTGGTACTGGTAGCAAAGGAGGG-ATGATGTCTATTTTTTTGATG 21812 Query 165747 GGTTGTTACGACGATGAATCCGGTAAATGGAAGACGGTAACTAAATGTTCC----GGCCA 165802 || |||| || | ||| |||||| || || |||||| || | || || Sbjct 21813 GGATGTTTTGATAAGAGGTCCCAGAAATGGTGTACTGTTACTAAA-GTACATGGAGGACA 21871 Query 165803 CGATGATAATACGTTAAGGGTTTTACAAGACCAATTAAAGATGGTTAAAATTAACAAGGA 165862 |||| ||| |||||| ||||| | ||||||||| | || || || Sbjct 21872 TACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTTAAAGTCAATAATGA 21931 Query 165863 TCCCaaaaaaaTTCCAGTGTGGTTGGTAGTTAATAAAATCTATA-TTCCCGATTTTGTA- 165920 | | ||||| | |||||| ||||| ||| ||| || ||||||||||||| Sbjct 21932 A---ATGGATATTCCTGAATGGTTGAATGTTAA-AAAGTCTTTAATTCCCGATTTTGTTT 21987 Query 165921 GTAGAGGATCCAAAACAATCTCAGATATGGGAAATTTCAGGAGCAGAGTTTACGTCTTCA 165980 ||| || |||||||| |||||| | |||||||| |||| ||||| ||| ||| | Sbjct 21988 GTAAAG-ATCCAAAAACATCTCAAGTTTGGGAAATAACAGGTGCAGAATTT---TCTAAA 22043 Query 165981 ----AAGTCACATACAGCAAATGGAATATCGATTAGATTTCCTAGATTTACTAGGATTAG 166036 ||| | ||||| |||||||||||||| || ||||||||| | |||| ||| | Sbjct 22044 GCTGAAG-CTCATACTGCAAATGGAATATCAATAAGATTTCCTCGTGTTACATTAATTCG 22102 Query 166037 AGAAGATAAAACGTGGAAAGAATCTACTCATCTAAACGATTTAG 166080 | |||||| | ||||||||| | ||| | || | || |||| Sbjct 22103 TTATGATAAATCATGGAAAGAAGCAACTACTTTAGAAGAATTAG 22146 >seq55348 Length=21870 Score = 104 bits (114), Expect = 3e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 71383 TATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAA 71442 || || || |||||||| || || |||| ||||||||| || |||||||| |||||| Sbjct 9522 TAAGTTTCATATGGTCCAAATTCTTGTGCTAATTCACAACTTGCTTCTAATGCACCATAA 9463 Query 71443 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 71502 ||||| ||||| ||||| | | || | | |||||||| |||||||| ||||| Sbjct 9462 TAAATAGTTTCAAAAATTTCAATGTTTAATTTCTGTGCTTCTTCACTATCAAAAGGATAC 9403 Query 71503 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAAC 71537 | || |||||| | ||||||||||||||||| Sbjct 9402 CTCAAAGAAATAAATGTATCTGCTAATCCTTGAAC 9368 >seq89448 Length=33718 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/112 (78%), Gaps = 3/112 (3%) Strand=Plus/Minus Query 36489 ACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATAAATATGTGTATTATCA 36548 |||||||||| || | ||| ||||| ||||| ||||| | ||||| ||| |||||| Sbjct 5355 ACCTGAGTTAATGCACGCCAGTCCATATTAGCACTTCCAATATAAAAATGCTGATTATCT 5296 Query 36549 GATATCCAAAATTTTGTATGAAGAACTCC---TCCTAGGATATTTGTAATAT 36597 |||||||||||||||||| |||||||| ||| || | ||||||| || Sbjct 5295 ATTATCCAAAATTTTGTATGGAGAACTCCACTTCCAAGAAGTTTTGTAAAAT 5244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670363967110080