Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_004678.1 Length=16784 Score E Sequences producing significant alignments: (Bits) Value seq88054 334 8e-88 >seq88054 Length=21660 Score = 334 bits (370), Expect = 8e-88 Identities = 710/1052 (67%), Gaps = 12/1052 (1%) Strand=Plus/Plus Query 14717 GTAATTAAAATTTTATTAAAGAATGGACTAATGGCTTTAAATGAATAGTAATGAATCCAG 14776 |||||||||||||||||| | || || ||| |||||||| || || |||| |||| Sbjct 19962 GTAATTAAAATTTTATTATAAAAAGGTGAAATAGCTTTAAAACTGTAATAGTGAAGCCAG 20021 Query 14777 TGTGTAACTTCATCAAATTCAGGGTTATGGAATGGTGGTTTTAACATACCTTTTGTGTAA 14836 | || | ||||| ||||| || || | || ||| ||| ||||| || || || | Sbjct 20022 TAAGTTATTTCATTGAATTCTGGATTGTTAAACGGTTCTTTAAACATTCCCTTAGTACTA 20081 Query 14837 CGTTTATATTTAATTGAATTAATATCCAAAATAAACGCATATAAATCTGATTTTGGTTTA 14896 ||||| || || ||||||||| || ||||||||||| | ||| |||||||||| Sbjct 20082 CGTTTGTAACGAAGCATATTAATATCAAATATAAACGCATAAAGATCACTTTTTGGTTTA 20141 Query 14897 ATTTCTTCAACGTTGCCAGTAAACTCTTTAAGTTTAGATACATCATAAGTAAATACAGCA 14956 ||||| |||| || || |||| || | | || || |||| | | |||||||| | | Sbjct 20142 ATTTCAACAACTTTACCCTTAAATTCACTTAATTCTGAAACATTAAATGTAAATACGGAA 20201 Query 14957 CCAACTGGAATTGTATCTCCTAATTGTGATTGATAATCTCCATACGCACGTAAAAAGTCA 15016 | || || |||| || ||||||||||||||| ||||| || |||||| | | | Sbjct 20202 TCTTTAGGTATAATATCATCTTTTTGTGATTGATAATCACCATAAGCCCGTAAATAATTA 20261 Query 15017 ATTGAATC-TTGGTTTTGTAACTTAAATTCTTTTGTTACTTTAAACACGCCACCTAAGTC 15075 || | ||| || || | ||| ||| || | ||| |||| | || ||||| || Sbjct 20262 ATCGTATCATTAGTACT-TAAAGTAATATCATCAGTTGTTTTATAAACACCACCCAAAGT 20320 Query 15076 GTCAAAACTAATAACGTGATCTGTGAAATCAATGCCTGCAATCTGGAATGTGTTTGCA-- 15133 ||||| ||||| ||| || ||| | || ||| || || || || || Sbjct 20321 ATCAAACGAAATAATTCGATTCGTAGGATCTAAACCAGCAGCTTGAAAAGTATTACCAAC 20380 Query 15134 ATCTTAGTATCTAAAAGATAAGATTTTAATGAATCTGTTGTTAAAATCACAATATCTTTT 15193 | || || | || || |||||||| || ||| ||||||| || |||||||| Sbjct 20381 AACTGAG--TTTACAAAGTAAGATTTATATTTATCCGTTGTTACTATACAAATATCTTCA 20438 Query 15194 AATTTTGATACAGTTGTATATTGTCCAATTGCACCACCTGATGCACGATGTACTTCATTA 15253 | | || || ||| | ||| |||| |||||||| ||||| || || |||| ||| Sbjct 20439 ATATCTGTTAGAGTCGAATAACGTCCTATTGCACCTCCTGAAGCTTTATTAGCTTCGTTA 20498 Query 15254 TATTTAGCACTGTTGTTTTGTAAGTTTAGGATTGCTTCAAAAACT-TTGCTT--GCTAAA 15310 || |||| ||||| | ||| | || ||| ||| || || ||| |||| Sbjct 20499 TACAATTCACTAGGATTTTGAATGTTGAAAATGGCT---AAAGCTATTTCTTCAGCTACG 20555 Query 15311 TCTTCTTTTGATGTTGCTTTACGTACATTTGTTTCGGATAATTGATTCAATGAGTAATCA 15370 |||| || ||| | | | | ||||| || |||||| || || |||||| Sbjct 20556 TCTTGTTCACTCGTTACAGTCCTTTTATTTGAATCATTTAATTGGTTTAAACTGTAATCG 20615 Query 15371 ACTAACATTGCACGCATTTCTTTTTCTTCTAATACATTAATATCAGAAATTTTCTTTTTG 15430 | |||||| || |||||| ||||||| ||| |||||| || |||||| || || Sbjct 20616 ATTAACATAGCTTTTATTTCTCTTTCTTCAGATATATTAATGTCCGAAATTCGTTTATTT 20675 Query 15431 TATACACCTAAAGCGTAATTAGTTGCGTCTGCTAATGTTTGGAAATTGAAACGTGTATCA 15490 |||| || | || | || | || || |||| ||| |||||||| | | ||| Sbjct 20676 AATACCCCAAGTGCTGCACTAATAGCATCACCTAAAGTTAAAAAATTGAATCTTACATCG 20735 Query 15491 TTGTTGTTTAATGTGAATTTTTGTTTCTTCACAATTCCGTTACCATATAACTTAGTTGCC 15550 || | ||||| || ||||| || ||||| | || |||||||| |||||| Sbjct 20736 TTATCATTTAACGTAAATTTCTGCTTCTTAAACTCGCCCGGCCCATATAAACGTGTTGCC 20795 Query 15551 ATACGTGGATAATTACGTTTCAACATTAATTCCTCATTTTTAGATAAGTCCATGTTAATT 15610 ||||| ||||||| | ||| |||||||| || ||| |||||||||| | ||| || Sbjct 20796 ATACGAGGATAATGTCTTTTTAACATTAAATCTTCACTTTTAGATAAATTCATCCCAACA 20855 Query 15611 GGTACTGTGTCCATAATCACGTATTCTTCACTATATTGTCCAATAAAATCTTGCTCTTTA 15670 || || || || | | || ||||| ||| | ||||| ||||| |||| || Sbjct 20856 GGAACAGTATCTAAATAAACATATTCCTCAGTTAATTGTGAAATAACGGGAACCTCTCTA 20915 Query 15671 GCTAACCAATTAAAACGATTACCTAATGCAATATCGATTAATAAAGTCTCATTAATCTTA 15730 ||||||||||||||||||||||||| || ||| ||||||||||| ||| | || || Sbjct 20916 GCTAACCAATTAAAACGATTACCTACGGCTTGATCAATTAATAAAGTTTCACTTATTTTT 20975 Query 15731 GGGAATAAATATTTATTTACAAATGTTTCGAA 15762 ||||||||| | || |||| | | || || || Sbjct 20976 GGGAATAAAAACTTGTTTATATAAGTCTCAAA 21007 Score = 143 bits (158), Expect = 3e-30 Identities = 328/488 (67%), Gaps = 17/488 (3%) Strand=Plus/Plus Query 13724 TATTTTAGACGTTGTTTCATCATCGTAATACGGTTTAATATCTAAACCATAACGCTTTGA 13783 || |||||| ||| |||||| || ||||| || | ||| | |||| | || || | Sbjct 18988 TAATTTAGATATTGCTTCATCGTCATAATAAGGATAAATGTTTAAATTGAATCGTTT--A 19045 Query 13784 TAAAAACGT---AATTGGTTCA--CGACCTTTTAAATAGATATTACTGTTTGATGTGGTA 13838 | ||||| | | |||| | || ||||| | || || || | || ||||||| Sbjct 19046 TTAAAACATTGAAGAGGGTTTAAACGTCCTTTGATGTAAATGTTTCCATTATTTGTGGTA 19105 Query 13839 AATCCACGATTACTTTTTGCCTCTTCGTCTGAAACACCGCTTTCTTTATCAACGGCTAAT 13898 || | |||||||||||||| || | || |||||||||||| ||| || || || || Sbjct 19106 AAAGCTCGATTACTTTTTGCTTCAACATCGGAAACACCGCTTGTTTTTTCTACAGCCAAA 19165 Query 13899 GAATTAATGCCTAAATAGTTACTTAATTCACTAATTTTGTTTTGATATTCCCGTTTCATT 13958 ||| | |||||| | || |||| |||| |||||||||||||||||| ||||| | | Sbjct 19166 CTATTTAAACCTAAAAAATTGTTTAACTCACCAATTTTGTTTTGATATTCACGTTTTAAT 19225 Query 13959 TCAGTTAATGCTGGGATTACGCTATTAC----TTGTTAAAT-CAATGATATCGTCATCTG 14013 ||||| | | |||| || | || || | |||| ||| | | || |||| Sbjct 19226 TCAGTAAGT----AAATTA-GCCACAACCGAGTTATCAAATGTAATTAACTGATCCTCTG 19280 Query 14014 CATTAAACATAGGTGACATTTTAACAAATGGTGCACCGTTATATATTTCGGACACAAGTT 14073 || ||| | | | | ||| | ||| || | || ||||||| || || ||||||| Sbjct 19281 GATCAAAAAGATGACTCGCTTTTATAAAAGGAGACCCATTATATAAATCAGAAACAAGTT 19340 Query 14074 GATTGATTGACTCGTCATTAATTTCTGATTTAAATATCTTGCTAAATTTTGCTTGCATGA 14133 |||| | || || ||| ||||||||| | || | | | ||||| ||||| Sbjct 19341 GATTAACTGTTTCATCACCTATTTCTGATCGTATAATGGTCATCATTTTTGACTGCATAG 19400 Query 14134 TTAAAGAAAAGCGAGATAAAGCAACTTCTGCTAATTCATCAGTATAATGTTCTATAATTT 14193 | | ||| | | ||| | | | ||| ||||||||| || ||||||||| ||||||| Sbjct 19401 TCACTGAATATCTAGAAACTACTATTTCAGCTAATTCAGCACAATAATGTTCAATAATTT 19460 Query 14194 CTATATCA 14201 || |||| Sbjct 19461 GTAAATCA 19468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 53533140399288