Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_004679.1 Length=18227 Score E Sequences producing significant alignments: (Bits) Value seq88054 334 9e-88 >seq88054 Length=21660 Score = 334 bits (370), Expect = 9e-88 Identities = 710/1052 (67%), Gaps = 12/1052 (1%) Strand=Plus/Plus Query 16157 GTAATTAAAATTTTATTAAAGAATGGACTAATGGCTTTAAATGAATAGTAATGAATCCAG 16216 |||||||||||||||||| | || || ||| |||||||| || || |||| |||| Sbjct 19962 GTAATTAAAATTTTATTATAAAAAGGTGAAATAGCTTTAAAACTGTAATAGTGAAGCCAG 20021 Query 16217 TGTGTAACTTCATCAAATTCAGGGTTATGGAATGGTGGTTTTAACATACCTTTTGTGTAA 16276 | || | ||||| ||||| || || | || ||| ||| ||||| || || || | Sbjct 20022 TAAGTTATTTCATTGAATTCTGGATTGTTAAACGGTTCTTTAAACATTCCCTTAGTACTA 20081 Query 16277 CGTTTATATTTAATTGAATTAATATCCAAAATAAACGCATATAAATCTGATTTTGGTTTA 16336 ||||| || || ||||||||| || ||||||||||| | ||| |||||||||| Sbjct 20082 CGTTTGTAACGAAGCATATTAATATCAAATATAAACGCATAAAGATCACTTTTTGGTTTA 20141 Query 16337 ATTTCTTCAACGTTGCCAGTAAACTCTTTAAGTTTAGATACATCATAAGTAAATACAGCA 16396 ||||| |||| || || |||| || | | || || |||| | | |||||||| | | Sbjct 20142 ATTTCAACAACTTTACCCTTAAATTCACTTAATTCTGAAACATTAAATGTAAATACGGAA 20201 Query 16397 CCAACTGGAATTGTATCTCCTAATTGTGATTGATAATCTCCATACGCACGTAAAAAGTCA 16456 | || || |||| || ||||||||||||||| ||||| || |||||| | | | Sbjct 20202 TCTTTAGGTATAATATCATCTTTTTGTGATTGATAATCACCATAAGCCCGTAAATAATTA 20261 Query 16457 ATTGAATC-TTGGTTTTGTAACTTAAATTCTTTTGTTACTTTAAACACGCCACCTAAGTC 16515 || | ||| || || | ||| ||| || | ||| |||| | || ||||| || Sbjct 20262 ATCGTATCATTAGTACT-TAAAGTAATATCATCAGTTGTTTTATAAACACCACCCAAAGT 20320 Query 16516 GTCAAAACTAATAACGTGATCTGTGAAATCAATGCCTGCAATCTGGAATGTGTTTGCA-- 16573 ||||| ||||| ||| || ||| | || ||| || || || || || Sbjct 20321 ATCAAACGAAATAATTCGATTCGTAGGATCTAAACCAGCAGCTTGAAAAGTATTACCAAC 20380 Query 16574 ATCTTAGTATCTAAAAGATAAGATTTTAATGAATCTGTTGTTAAAATCACAATATCTTTT 16633 | || || | || || |||||||| || ||| ||||||| || |||||||| Sbjct 20381 AACTGAG--TTTACAAAGTAAGATTTATATTTATCCGTTGTTACTATACAAATATCTTCA 20438 Query 16634 AATTTTGATACAGTTGTATATTGTCCAATTGCACCACCTGATGCACGATGTACTTCATTA 16693 | | || || ||| | ||| |||| |||||||| ||||| || || |||| ||| Sbjct 20439 ATATCTGTTAGAGTCGAATAACGTCCTATTGCACCTCCTGAAGCTTTATTAGCTTCGTTA 20498 Query 16694 TATTTAGCACTGTTGTTTTGTAAGTTTAGGATTGCTTCAAAAACT-TTGCTT--GCTAAA 16750 || |||| ||||| | ||| | || ||| ||| || || ||| |||| Sbjct 20499 TACAATTCACTAGGATTTTGAATGTTGAAAATGGCT---AAAGCTATTTCTTCAGCTACG 20555 Query 16751 TCTTCTTTTGATGTTGCTTTACGTACATTTGTTTCGGATAATTGATTCAATGAGTAATCA 16810 |||| || ||| | | | | ||||| || |||||| || || |||||| Sbjct 20556 TCTTGTTCACTCGTTACAGTCCTTTTATTTGAATCATTTAATTGGTTTAAACTGTAATCG 20615 Query 16811 ACTAACATTGCACGCATTTCTTTTTCTTCTAATACATTAATATCAGAAATTTTCTTTTTG 16870 | |||||| || |||||| ||||||| ||| |||||| || |||||| || || Sbjct 20616 ATTAACATAGCTTTTATTTCTCTTTCTTCAGATATATTAATGTCCGAAATTCGTTTATTT 20675 Query 16871 TATACACCTAAAGCGTAATTAGTTGCGTCTGCTAATGTTTGGAAATTGAAACGTGTATCA 16930 |||| || | || | || | || || |||| ||| |||||||| | | ||| Sbjct 20676 AATACCCCAAGTGCTGCACTAATAGCATCACCTAAAGTTAAAAAATTGAATCTTACATCG 20735 Query 16931 TTGTTGTTTAATGTGAATTTTTGTTTCTTCACAATTCCGTTACCATATAACTTAGTTGCC 16990 || | ||||| || ||||| || ||||| | || |||||||| |||||| Sbjct 20736 TTATCATTTAACGTAAATTTCTGCTTCTTAAACTCGCCCGGCCCATATAAACGTGTTGCC 20795 Query 16991 ATACGTGGATAATTACGTTTCAACATTAATTCCTCATTTTTAGATAAGTCCATGTTAATT 17050 ||||| ||||||| | ||| |||||||| || ||| |||||||||| | ||| || Sbjct 20796 ATACGAGGATAATGTCTTTTTAACATTAAATCTTCACTTTTAGATAAATTCATCCCAACA 20855 Query 17051 GGTACTGTGTCCATAATCACGTATTCTTCACTATATTGTCCAATAAAATCTTGCTCTTTA 17110 || || || || | | || ||||| ||| | ||||| ||||| |||| || Sbjct 20856 GGAACAGTATCTAAATAAACATATTCCTCAGTTAATTGTGAAATAACGGGAACCTCTCTA 20915 Query 17111 GCTAACCAATTAAAACGATTACCTAATGCAATATCGATTAATAAAGTCTCATTAATCTTA 17170 ||||||||||||||||||||||||| || ||| ||||||||||| ||| | || || Sbjct 20916 GCTAACCAATTAAAACGATTACCTACGGCTTGATCAATTAATAAAGTTTCACTTATTTTT 20975 Query 17171 GGGAATAAATATTTATTTACAAATGTTTCGAA 17202 ||||||||| | || |||| | | || || || Sbjct 20976 GGGAATAAAAACTTGTTTATATAAGTCTCAAA 21007 Score = 143 bits (158), Expect = 3e-30 Identities = 328/488 (67%), Gaps = 17/488 (3%) Strand=Plus/Plus Query 15164 TATTTTAGACGTTGTTTCATCATCGTAATACGGTTTAATATCTAAACCATAACGCTTTGA 15223 || |||||| ||| |||||| || ||||| || | ||| | |||| | || || | Sbjct 18988 TAATTTAGATATTGCTTCATCGTCATAATAAGGATAAATGTTTAAATTGAATCGTTT--A 19045 Query 15224 TAAAAACGT---AATTGGTTCA--CGACCTTTTAAATAGATATTACTGTTTGATGTGGTA 15278 | ||||| | | |||| | || ||||| | || || || | || ||||||| Sbjct 19046 TTAAAACATTGAAGAGGGTTTAAACGTCCTTTGATGTAAATGTTTCCATTATTTGTGGTA 19105 Query 15279 AATCCACGATTACTTTTTGCCTCTTCGTCTGAAACACCGCTTTCTTTATCAACGGCTAAT 15338 || | |||||||||||||| || | || |||||||||||| ||| || || || || Sbjct 19106 AAAGCTCGATTACTTTTTGCTTCAACATCGGAAACACCGCTTGTTTTTTCTACAGCCAAA 19165 Query 15339 GAATTAATGCCTAAATAGTTACTTAATTCACTAATTTTGTTTTGATATTCCCGTTTCATT 15398 ||| | |||||| | || |||| |||| |||||||||||||||||| ||||| | | Sbjct 19166 CTATTTAAACCTAAAAAATTGTTTAACTCACCAATTTTGTTTTGATATTCACGTTTTAAT 19225 Query 15399 TCAGTTAATGCTGGGATTACGCTATTAC----TTGTTAAAT-CAATGATATCGTCATCTG 15453 ||||| | | |||| || | || || | |||| ||| | | || |||| Sbjct 19226 TCAGTAAGT----AAATTA-GCCACAACCGAGTTATCAAATGTAATTAACTGATCCTCTG 19280 Query 15454 CATTAAACATAGGTGACATTTTAACAAATGGTGCACCGTTATATATTTCGGACACAAGTT 15513 || ||| | | | | ||| | ||| || | || ||||||| || || ||||||| Sbjct 19281 GATCAAAAAGATGACTCGCTTTTATAAAAGGAGACCCATTATATAAATCAGAAACAAGTT 19340 Query 15514 GATTGATTGACTCGTCATTAATTTCTGATTTAAATATCTTGCTAAATTTTGCTTGCATGA 15573 |||| | || || ||| ||||||||| | || | | | ||||| ||||| Sbjct 19341 GATTAACTGTTTCATCACCTATTTCTGATCGTATAATGGTCATCATTTTTGACTGCATAG 19400 Query 15574 TTAAAGAAAAGCGAGATAAAGCAACTTCTGCTAATTCATCAGTATAATGTTCTATAATTT 15633 | | ||| | | ||| | | | ||| ||||||||| || ||||||||| ||||||| Sbjct 19401 TCACTGAATATCTAGAAACTACTATTTCAGCTAATTCAGCACAATAATGTTCAATAATTT 19460 Query 15634 CTATATCA 15641 || |||| Sbjct 19461 GTAAATCA 19468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 58145806643760