Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq76947 98.7 8e-16 seq85547 93.3 3e-14 seq81434 86.0 5e-12 seq73005 86.0 5e-12 >seq76947 Length=48948 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 ||||| ||||| |||||||| || |||| | || | | ||||| | |||||||| Sbjct 22611 GTAGATTCCTTCTGAATATTATAGTCCGAGAGAGTGCGGCCATCCTCTAATTGTTTACCT 22670 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 ||| |||| |||||||| ||||| || | || ||||| || |||||| ||| Sbjct 22671 GCAAAAATCAGTCTCTGTTGATCGGGAGGAATTCCTTCTTTATCCTGAATTTTTGCTTTG 22730 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | | | |||||| | || || ||| | ||||||||||| || ||||| ||| Sbjct 22731 ACATTTTCAATAGTATCACTTGGTTCTACTTCCAAAGTAATGGTTTTCCCGGTTAATGTT 22790 Query 19025 TTGACAAAAATTTGCAT 19041 || ||||| |||||||| Sbjct 22791 TTTACAAATATTTGCAT 22807 >seq85547 Length=49496 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 18839 TGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGT 18898 || || ||| ||| ||||||||||| ||||||| | || | || ||||| ||| Sbjct 24871 TGTAAGGTACTCTCTTTTTGAATATTATAATCCGAAAGAGTACGACCATCTTCCAGTTGT 24812 Query 18899 TTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTC 18958 || || ||| | || |||||||| ||||| || | ||| || || || ||||| Sbjct 24811 TTGCCAGCAAAGATGAGTCTCTGTTGATCAGGTGGAATGCCTTCCTTATCTTGGATTTTA 24752 Query 18959 TGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTT 19018 ||| || | | | ||||| | || ||| ||| | ||||| ||||| |||||| Sbjct 24751 GCTTTCACATTTTCAATGGTATCACTGGGTTCCACTTCCAGAGTAATTGTTTTCCCTGTT 24692 Query 19019 AAAGTTTTGACAAAAATTTGCATT 19042 || ||||| ||||||||||||||| Sbjct 24691 AATGTTTTAACAAAAATTTGCATT 24668 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/234 (68%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 18813 TTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCG 18872 ||||||||| || | | |||| ||| | || || |||||||||||||| ||||| | Sbjct 24669 TTCCTCCTCTTAAACGAAGTACCAAGTGAAGTGTCGATTCCTTTTGAATATTATAATCTG 24610 Query 18873 CCATTGTTTTGGCGTCC----TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCC 18928 | || |||||| || | |||||| || ||| | || | | ||| ||||| Sbjct 24609 ATAAGGT----GCGTCCATCTTCTAACTGTTTGCCTGCAAAGATCAAACGCTGTTGATCG 24554 Query 18929 ACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGC 18988 || | || ||||| || |||||| |||||| | | | || || | ||| Sbjct 24553 GGAGGAATTCCTTCTTTATCTTGAATTTTAGCTTTTACATTCTCAATGGTGTCACTTGGC 24494 Query 18989 TCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 ||| ||| | ||| ||||| || |||||||| ||||| |||||||| |||||| Sbjct 24493 TCCACTTCCAAGGTGATGGTCTTCCCTGTTAATGTTTTAACAAAAATCTGCATT 24440 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18813 TTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCG 18872 ||||||||| ||| | | ||||| ||| | || || ||||||||||| || ||||| | Sbjct 24441 TTCCTCCTCTCAAACGAAGCACCAAGTGAAGTGTTGATTCCTTTTGAATGTTATAATCAG 24382 Query 18873 CCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGG 18932 || || | || |||| ||||| || ||| |||| | |||||| ||||| | Sbjct 24381 ACAAAGTACGCCCATCTTCCAATTGTTTCCCAGCAAAAATCAATCTCTGTTGATCTGGTG 24322 Query 18933 GCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG 18992 | | || ||||| || |||||| ||| || | | | ||||| | || || Sbjct 24321 GTATACCTTCTTTATCTTGAATTTTTGCTTTCACGTTTTCAATTGTATCACTTGGTTCAA 24262 Query 18993 TTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 ||| | || || ||||| || || | || || ||||||||||||||| Sbjct 24261 CTTCCAAAGTGATAGTTTTCCCAGTGAGGGTCTTCACAAAAATTTGCATT 24212 >seq81434 Length=18142 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18812 TTTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCC 18871 |||||||||| | | | |||| ||| || ||||||||||| ||||| || || || Sbjct 9287 TTTCCTCCTCTGAGACGAAGAACCAAGTGTAATGTAGACTCCTTCTGAATGTTATAGTCA 9228 Query 18872 GCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACG 18931 | | || |||| ||||| || || || ||| ||||||| ||||||||||| Sbjct 9227 GAAAGAGTACGACCGTCTTCCAGTTGCTTCCCTGCAAAAATAAGCCTCTGCTGATCGGGA 9168 Query 18932 GGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCC 18991 || | ||| ||||| || |||||| | ||| || | | | ||||| | ||||| Sbjct 9167 GGAATGCCTTCTTTATCTTGAATTTTTTCTTTCACATTTTCTATTGTATCACTTGGCTCT 9108 Query 18992 GTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 ||| | || || || || || || | || || |||||||| ||||| Sbjct 9107 ACTTCCAGTGTTATTGTCTTGCCAGTCAGGGTCTTCACAAAAATCTGCAT 9058 >seq73005 Length=127446 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18813 TTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCG 18872 |||| |||| ||| || | || | || | || || ||||||||||| |||||||| | Sbjct 43258 TTCCACCTCTCAATCTAAGAACGAGATGAAGGGTTGATTCCTTTTGAATGTTGTAATCAG 43199 Query 18873 CCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGG 18932 || ||| || | || |||| || || || ||| | ||||| | |||||| || | Sbjct 43198 ACAGGGTTCTGCCATCTTCCAATTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGAG 43139 Query 18933 GCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG 18992 | | || || || || ||||| ||| || | | | ||||| | || ||| Sbjct 43138 GTATTCCTTCCTTATCCTGGATTTTAGCTTTCACATTTTCTATGGTATCACTGGGTTCCA 43079 Query 18993 TTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 ||| | ||||||||||||||| || | || |||||||| || |||||| Sbjct 43078 CTTCCAAGGTAATGGTTTTACCAGTAAGTGTCTTGACAAATATCTGCATT 43029 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18813 TTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCG 18872 |||| || |||| ||| | |||| ||| | || ||||||||||| ||||| || | Sbjct 43486 TTCCACCACGCAGCCTGAGAACCAAGTGAAGGGTGCTTTCCTTTTGAATGTTGTAGTCAG 43427 Query 18873 CCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGG 18932 | ||| | | || |||| ||| || || ||| | || || | ||||||||| | Sbjct 43426 ATAATGTGCGGCCATCTTCCAACTGCTTGCCAGCAAATATCAGACGCTGCTGATCTGGAG 43367 Query 18933 GCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG 18992 | | || |||||||| || || ||||| | | | ||||| | ||||| Sbjct 43366 GAATTCCTTCTTTGTCCTGGATCTTTGCCTTTACATTTTCAATGGTATCACTTGGCTCTA 43307 Query 18993 TTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 ||| | |||||||| || ||||| |||||||| |||||||| |||||| Sbjct 43306 CTTCCAGAGTAATGGTCTTGCCTGTCAAAGTTTTAACAAAAATCTGCATT 43257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414105898784752