Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq85547 122 7e-23 seq76947 116 3e-21 seq81434 104 2e-17 seq73005 104 2e-17 seq47705 98.7 8e-16 >seq85547 Length=49496 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 ||||||||| || | | |||||| || ||||| ||||| ||||| ||||| ||||| Sbjct 24441 TTCCTCCTCTCAAACGAAGCACCAAGTGAAGTGTTGATTCCTTTTGAATGTTATAATCAG 24382 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 || ||| ||||||||||||||| || ||| |||| | ||||||||||| | Sbjct 24381 ACAAAGTACGCCCATCTTCCAATTGTTTCCCAGCAAAAATCAATCTCTGTTGATCTGGTG 24322 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | |||||||| || ||||||| |||||| | ||| | ||| | ||||| Sbjct 24321 GTATACCTTCTTTATCTTGAATTTTTGCTTTCACGTTTTCAATTGTATCACTTGGTTCAA 24262 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| || || ||||| || || | || || ||||||||||||||| Sbjct 24261 CTTCCAAAGTGATAGTTTTCCCAGTGAGGGTCTTCACAAAAATTTGCATT 24212 Score = 116 bits (128), Expect = 3e-21 Identities = 182/259 (70%), Gaps = 5/259 (2%) Strand=Plus/Minus Query 19955 TAAAATTTAAATATATTTTATCATT----TTCCTCCTCGTAACCTCAACACCAAATGTAG 20010 ||||| || || ||||||| |||| ||||||||| | | | || ||||||| Sbjct 24925 TAAAAGTTGTAT-TATTTTAACATTCAGTTTCCTCCTCTGAGACGAAGTACTAAATGTAA 24867 Query 20011 TGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCC 20070 ||| |||||||| || || ||||| | ||| | |||||||| ||||||||| Sbjct 24866 GGTACTCTCTTTTTGAATATTATAATCCGAAAGAGTACGACCATCTTCCAGTTGTTTGCC 24807 Query 20071 CGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTT 20130 ||| | || || ||||||||||| || | |||||| || || ||||| ||| Sbjct 24806 AGCAAAGATGAGTCTCTGTTGATCAGGTGGAATGCCTTCCTTATCTTGGATTTTAGCTTT 24747 Query 20131 CACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGT 20190 ||| | ||| | ||| | |||||| ||||| ||||| ||||| || || || || Sbjct 24746 CACATTTTCAATGGTATCACTGGGTTCCACTTCCAGAGTAATTGTTTTCCCTGTTAATGT 24687 Query 20191 TTTGACAAAAATTTGCATT 20209 ||| ||||||||||||||| Sbjct 24686 TTTAACAAAAATTTGCATT 24668 >seq76947 Length=48948 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 || |||||||| |||||||| || || || || || || | ||| ||| || Sbjct 22599 ACTAAATGTAGAGTAGATTCCTTCTGAATATTATAGTCCGAGAGAGTGCGGCCATCCTCT 22658 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 |||||||| || ||| |||| || |||||||||||| || | |||||||| || | Sbjct 22659 AATTGTTTACCTGCAAAAATCAGTCTCTGTTGATCGGGAGGAATTCCTTCTTTATCCTGA 22718 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 |||||| ||| || | ||| || ||| | ||||| ||||| ||||||||||| Sbjct 22719 ATTTTTGCTTTGACATTTTCAATAGTATCACTTGGTTCTACTTCCAAAGTAATGGTTTTC 22778 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| || ||||| ||||| |||||||| Sbjct 22779 CCGGTTAATGTTTTTACAAATATTTGCAT 22807 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||||| ||| | ||| || ||||| || || |||||||| || || || ||||| Sbjct 22809 CCTCCTCTTAAGCGCAATACTAAATGGAGAGTGGATTCTTTCTGGATATTATAATCTGAA 22868 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| | |||||| | |||||| || ||| | || | ||||| |||||| || Sbjct 22869 AGAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAATATCAATCTCTGCTGATCGGGTGGA 22928 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||| || || ||| ||||| | | | || ||| | ||||| | Sbjct 22929 ATGCCTTCTTTATCTTGGATCTTTGCCTTCACATTCTCTATAGTATCACTCGGTTCTACT 22988 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| ||||||||||| || || | ||||| ||||| |||||||| Sbjct 22989 TCCAAAGTAATGGTTTTTCCTGTGAGTGTTTTAACAAATATTTGCAT 23035 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 |||| ||| ||||| ||||| ||||| || || ||||| || ||| | ||||||| Sbjct 23283 ACCAGATGAAGTGTTGATTCCTTTTGAATATTATAATCTGACAGAGTGCGACCATCTTCC 23342 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | ||| || || ||| | ||||| | ||||||||| || | ||||||||||| | Sbjct 23343 AGTTGCTTACCAGCAAAGATAAGTCGCTGTTGATCAGGTGGAATTCCTTCTTTGTCTTGA 23402 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 |||||| || || | ||| | || | |||||| ||||| || || ||||| Sbjct 23403 ATTTTTGCCTTTACATTTTCAATTGTGTCACTTGGTTCCACTTCCAGAGTGATTGTTTTA 23462 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || | || || ||||| |||||||| Sbjct 23463 CCAGTGAGTGTCTTCACAAAGATTTGCAT 23491 >seq81434 Length=18142 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 19979 TTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCG 20038 |||||||||| | | | ||||| |||| |||||| || || || ||||| || || Sbjct 9287 TTTCCTCCTCTGAGACGAAGAACCAAGTGTAATGTAGACTCCTTCTGAATGTTATAGTCA 9228 Query 20039 CCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACG 20098 | ||| | ||||||| ||| || || ||| ||||||||||||| |||||| Sbjct 9227 GAAAGAGTACGACCGTCTTCCAGTTGCTTCCCTGCAAAAATAAGCCTCTGCTGATCGGGA 9168 Query 20099 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCC 20158 || | ||||||||| || |||||||| |||||| | | | | ||| | || || Sbjct 9167 GGAATGCCTTCTTTATCTTGAATTTTTTCTTTCACATTTTCTATTGTATCACTTGGCTCT 9108 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| || || || ||||| |||| || || |||||||| ||||| Sbjct 9107 ACTTCCAGTGTTATTGTCTTGCCAGTCAGGGTCTTCACAAAAATCTGCAT 9058 >seq73005 Length=127446 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||| |||| || || | || | ||| || || ||||| ||||| ||||||||||| Sbjct 43258 TTCCACCTCTCAATCTAAGAACGAGATGAAGGGTTGATTCCTTTTGAATGTTGTAATCAG 43199 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 || ||| | |||||||||||| ||||| ||| | ||||| | ||| || || | Sbjct 43198 ACAGGGTTCTGCCATCTTCCAATTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCAGGAG 43139 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||||| || || ||||| |||||| | | | | ||| | |||||| Sbjct 43138 GTATTCCTTCCTTATCCTGGATTTTAGCTTTCACATTTTCTATGGTATCACTGGGTTCCA 43079 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| |||||||||||| || || | || |||||||| || |||||| Sbjct 43078 CTTCCAAGGTAATGGTTTTACCAGTAAGTGTCTTGACAAATATCTGCATT 43029 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || || || || | || | ||| ||||| ||||||||||| ||||| ||||| | Sbjct 44396 CCACCACGCAATCTAAGGACAAGATGGAGTGTCGATTCTTTTTGGATGTTATAATCTGAC 44337 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| |||||| |||||||| || ||| | || | | ||| |||||| || Sbjct 44336 AGAGTACGCCCATCTTCTAATTGTTTACCGGCAAAGATCAAACGCTGCTGATCGGGAGGA 44277 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| ||||||| |||||| | | | | ||| | ||||| Sbjct 44276 ATACCTTCTTTGTCCTGAATTTTTGCTTTCACATTTTCTATCGTATCACTTGGTTCTACC 44217 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| ||||| ||||| || |||| ||||||||||| || ||||| Sbjct 44216 TCCAGAGTAATAGTTTTACCAGTCAGTGTTTTGACAAAGATCTGCAT 44170 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 ||||| |||| |||||| || || || ||||| || || | ||| | |||||| Sbjct 44834 ACCAAGTGTAATGTAGACTCCTTCTGAATGTTATAGTCAGAAAGAGTACGACCGTCTTCC 44775 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | ||| || || ||| ||||||||||||| |||||| || | ||||||||| || | Sbjct 44774 AGTTGCTTCCCTGCAAAAATAAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTATCTTGA 44715 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 |||||| |||||| | | | | ||| | || || ||||| || || || ||| Sbjct 44714 ATTTTTGCTTTCACATTTTCTATTGTATCACTTGGCTCTACTTCCAGTGTTATTGTCTTG 44655 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || |||| || || |||||||| ||||| Sbjct 44654 CCAGTCAGGGTCTTCACAAAAATCTGCAT 44626 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 ||||||| | | ||| | |||| ||| || |||||||| ||||| ||||||||||| Sbjct 43030 TTCCTCCCCTGAGCCTGAGAACCAGATGAAGGGTAGATTCCTTTTGAATGTTGTAATCAG 42971 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 || ||| |||||||| || || || ||| ||||||| | ||| ||||| | Sbjct 42970 ACAGGGTTCGGCCATCTTCCAGCTGCTTTCCGGCAAAAATAAGACGCTGCTGATCTGGAG 42911 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||||| || || ||| || ||||| | ||| | || | |||||| Sbjct 42910 GGATCCCTTCCTTATCCTGAATCTTGGTCTTCACATTCTCAATTGTGTCACTAGGTTCTA 42851 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | |||||| ||||| || || || ||||| ||||| || ||||| Sbjct 42850 CCTCAAGGGTAATTGTTTTACCAGTTAATGTTTTCACAAATATCTGCAT 42802 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || || || || | || | ||| ||||| || |||||||| || ||||| || | Sbjct 43940 CCACCACGCAATCTAAGGACAAGATGGAGTGTTGACTCTTTTTGGATATTGTAGTCAGAC 43881 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || | ||||||||| || ||||| ||| | || | | || ||||| || Sbjct 43880 AAGGTGCGACCATCTTCCAACTGCTTGCCAGCAAAGATCAATCGTTGCTGATCTGGAGGT 43821 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||||||||| ||||| ||||| | ||| || || | ||||| | Sbjct 43820 ATTCCTTCTTTGTCTTGGATTTTAGCCTTCACATTCTCAATAGTGTCACTGGGTTCTACT 43761 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 |||| ||| || || ||||| |||| ||||||||||| ||||||||| Sbjct 43760 TCCAGGGTGATAGTCTTGCCTGTCAGTGTTTTGACAAAGATTTGCATT 43713 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||| || || | ||| | ||||| || || || ||| ||||| |||||||| || Sbjct 43486 TTCCACCACGCAGCCTGAGAACCAAGTGAAGGGTGCTTTCCTTTTGAATGTTGTAGTCAG 43427 Query 20040 CCATAGTTTTAGA--ATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGAC 20097 ||| | | | ||||||||| || ||||| ||| | || || | ||| ||||| Sbjct 43426 --ATAATGTGCGGCCATCTTCCAACTGCTTGCCAGCAAATATCAGACGCTGCTGATCTGG 43369 Query 20098 GGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTC 20157 || | ||||||||||| || ||| || || | ||| | ||| | || || Sbjct 43368 AGGAATTCCTTCTTTGTCCTGGATCTTTGCCTTTACATTTTCAATGGTATCACTTGGCTC 43309 Query 20158 CGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| |||||||| ||||| ||||| ||||| |||||||| |||||| Sbjct 43308 TACTTCCAGAGTAATGGTCTTGCCTGTCAAAGTTTTAACAAAAATCTGCATT 43257 >seq47705 Length=377 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 ||||| |||| |||||| || || || ||||| || || | ||| | |||||| Sbjct 362 ACCAAGTGTAATGTAGACTCCTTCTGAATGTTATAGTCAGAAAGAGTACGACCGTCTTCC 303 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | ||| || || ||| ||||||||||||| |||||| || | ||||||||| || | Sbjct 302 AGTTGCTTCCCTGCAAAAATAAGCCTCTGCTGATCGGGAGGAATGCCTTCTTTATCTTGA 243 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 |||||| |||||| | | | | ||| | || || ||||| || || || ||| Sbjct 242 ATTTTTGCTTTCACATTTTCTATTGTATCACTTGGCTCTACTTCCAGTGTTATTGTCTTG 183 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || |||| || || |||||||| ||||| Sbjct 182 CCAGTCAGGGTCTTCACAAAAATCTGCAT 154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419114651454648