Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq76348 136 3e-27 >seq76348 Length=48548 Score = 136 bits (150), Expect = 3e-27 Identities = 165/222 (74%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234 ||||||||||| |||| || || ||||||| || ||||| || |||| ||||| Sbjct 25140 TCATCTCTACTGATTAATTCATTGCTGAATGTTAATCCAGGCATCAGTCCTCTCTTTTTT 25081 Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCT 13294 | ||| ||||| || ||||| ||||| |||||||||||||||||||| || ||||| ||| Sbjct 25080 AACCAGAATATTGCTGCAAATGAACCAGAAAAAAATATTCCTTCAACAGCAGCAAATGCT 25021 Query 13295 ATCAAC-CTTTCACCATACGTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGC 13353 | |||| | ||||||| | || | || | | ||||| ||| | ||||| | || Sbjct 25020 A-CAACACGTTCACCAAATGTGGAAGTTGAATCATTAATCCAATTTATTGCCCAATCAGC 24962 Query 13354 TTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAA 13395 |||| |||||| || || | |||| ||||| |||||||| Sbjct 24961 TTTTCTTTTAACACATGGCAAAGTTTCAATTGCATTAAATAA 24920 Score = 109 bits (120), Expect = 5e-19 Identities = 113/143 (79%), Gaps = 4/143 (3%) Strand=Plus/Minus Query 12801 TTTAAAAATCAATATCTAGAGAAAATACA-TCATCGTCCTTATTTGACATAACAG-ACAT 12858 |||||||||| ||| | | ||| ||| | ||| || || |||| ||| || |||| Sbjct 39504 TTTAAAAATCTGCATCAAATGTAAA-ACACTGATCTTCTTTTTTTGCCATCACTCCACAT 39446 Query 12859 TTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918 || | ||||||| | |||||||||||| |||||||||||||||||||| | || |||| Sbjct 39445 TTCT-GATATTCTCCAACTCTTTTTTCGAAAAAGTTTGTTTTTCCTTCCAGAGATATATG 39387 Query 12919 TTCCATAAAATCGAAAGGATTTT 12941 |||||||||||| || ||||||| Sbjct 39386 TTCCATAAAATCAAATGGATTTT 39364 Score = 107 bits (118), Expect = 2e-18 Identities = 141/191 (74%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 13538 AAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGC--AAGTATGTGCTTAATAA 13595 || ||||| |||||||| || |||||||||||||||||||| || ||||| ||||| Sbjct 19923 AAATTTTCATTAACTATACCATCACTAGCAGCAAAAAAAGCTAAAACATGTGA--AATAA 19866 Query 13596 AttttttttCGTTTTCTGACA-ACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACC 13654 | | |||||| | ||| || || || ||||| | |||||| || | |||||| Sbjct 19865 AATGTTTTTCATCTTCATTCAGACGTTC-CCAATGAACCATATCTTTAGAAAGATCTACT 19807 Query 13655 TCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAA 13714 || || || ||||| || ||||| |||| ||||||||||| ||| ||||| ||| Sbjct 19806 TCTTCTACTGTCCAGAATGAAGCTTCAGCTTTCTTATACATTTGCCAGATATCTGGATAT 19747 Query 13715 ACAATGGGAAA 13725 |||| ||||| Sbjct 19746 TCAATAGGAAA 19736 Score = 93.3 bits (102), Expect = 4e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 13415 TCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCT 13474 ||| ||||||||||||| || || | ||||||||||||||||||| |||||| || | Sbjct 21739 TCTGAAATATAAGTATCAATTAACAGACTATACATTTCTGAATGAACATTTTCTATTGAA 21680 Query 13475 ATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC 13518 |||||||| |||||||| || | || || | || |||||||| Sbjct 21679 ATTTGGAATCCATAAAAGCAGCGTGCTTCAGTAACTTGAACTTC 21636 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/216 (70%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 12956 TTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATT 13015 || || || |||||||| | || | ||| || || ||||| || || || || |||| Sbjct 25433 TTATTGCATCCTAATTCAACTAGAAGTCTATCTGCTACAAATTCAATATATCGTCTCATA 25374 Query 13016 AAATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCT 13075 | || ||| |||||||| || | | ||||| | ||||||||||| ||| | || |||| Sbjct 25373 AGATTACAATTCATTCCAATAAGTGCAACAGGAAGAGCTTCTGTTAGAAATTCTTGTTCT 25314 Query 13076 ATATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGG----ATTTGA 13131 || | ||||| || | | ||| | | | ||| ||||| |||||| |||| Sbjct 25313 ATTACTACTGCATCTTTGATTATTTGTATAATT---CTCTCT-TTGGAGGGTTTATTTAC 25258 Query 13132 TAGATGCTTAAACATCATACATGCAAAATCACAGTG 13167 | ||| | ||||| | ||||||||||||||| || Sbjct 25257 CAAATGACTGAACATTAAACATGCAAAATCACAATG 25222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430497017924016