Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq73005 98.7 8e-16 seq76947 86.0 5e-12 seq91494 84.2 2e-11 >seq73005 Length=127446 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| | | ||| | || | |||||| || |||||||||||||||||||||| | Sbjct 43028 CCTCCCCTGAGCCTGAGAACCAGATGAAGGGTAGATTCCTTTTGAATGTTGTAATCAGAC 42969 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | ||| | || ||||||||||| ||| | |||| | |||||||||||| || Sbjct 42968 AGGGTTCGGCCATCTTCCAGCTGCTTTCCGGCAAAAATAAGACGCTGCTGATCTGGAGGG 42909 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | |||||| ||| ||| || ||| | | | | || || || ||| || | Sbjct 42908 ATCCCTTCCTTATCCTGAATCTTGGTCTTCACATTCTCAATTGTGTCACTAGGTTCTACC 42849 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || |||||||| || | ||||||||||| |||||||| Sbjct 42848 TCAAGGGTAATTGTTTTACCAGTTAATGTTTTCACAAATATCTGCAT 42802 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 || || |||| ||| | || || ||||| ||||| ||||||||||||||||| |||| Sbjct 43484 CCACCACGCAGCCTGAGAACCAAGTGAAGGGTGCTTTCCTTTTGAATGTTGTAGTCAGAT 43425 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 ||| || | || |||| |||||| || | | || | |||||||||||| || Sbjct 43424 AATGTGCGGCCATCTTCCAACTGCTTGCCAGCAAATATCAGACGCTGCTGATCTGGAGGA 43365 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | ||| |||||| || || ||| | | | |||||||| | | ||| Sbjct 43364 ATTCCTTCTTTGTCCTGGATCTTTGCCTTTACATTTTCAATGGTATCACTTGGCTCTACT 43305 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || ||||| || || || | |||||| |||||||||||||| Sbjct 43304 TCCAGAGTAATGGTCTTGCCTGTCAAAGTTTTAACAAAAATCTGCAT 43258 >seq76947 Length=48948 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| |||||||| || ||||||||| |||||||| || | | | || | || || Sbjct 23510 CACCAAATGAAGAGTAGACTCCTTTTGTATGTTGTAGTCTGAGAGTGTACGACCATCTTC 23569 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 ||||||||| || | |||| |||||||||||||| || | || |||||| || Sbjct 23570 CAGCTGCTTTCCTGCAAAAATCAAACGCTGCTGATCTGGAGGAATACCTTCCTTATCTTG 23629 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || ||| | | | || ||||| | | ||| || | || |||||||| Sbjct 23630 GATCTTTGCCTTCACATTTTCAATAGTATCACTGGGCTCTACTTCCAAAGTGATGGTTTT 23689 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| || |||||||| |||||||| Sbjct 23690 TCCAGTGAGTGTCTTCACAAAGATCTGCAT 23719 >seq91494 Length=52025 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/157 (73%), Gaps = 4/157 (3%) Strand=Plus/Minus Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631 || ||||||||||| ||| | |||| | |||||||||||| || | || ||||||| Sbjct 10022 TCTTCCAGCTGCTTTCCGGCAAAAATAAGACGCTGCTGATCTGGAGGGATACCTTCCTTG 9963 Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTC--CGTCTCGACTGTTA 48689 ||| |||||| || | | ||||||||||| | | ||| | ||| || || | Sbjct 9962 TCCTGAATTTTAGCTTTCACATTTTCTATGGTATCGCTTGGCTCTACTTCTAGA--GTAA 9905 Query 48690 TGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||| || || || || || || |||||||||||||| Sbjct 9904 TGGTCTTGCCAGTCAGTGTCTTAACAAAAATCTGCAT 9868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420776777420408