Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq76348 158 1e-33 seq73121 134 1e-26 >seq76348 Length=48548 Score = 158 bits (174), Expect = 1e-33 Identities = 124/146 (85%), Gaps = 2/146 (1%) Strand=Plus/Minus Query 21124 TATTTAAAAATCAGCATCTAATGAGAAAACATT-ATCTTCtttttttGACATAATTCCCA 21182 |||||||||||| ||||| |||| |||||| | |||||||||||||| ||| | ||| Sbjct 39506 TATTTAAAAATCTGCATCAAATGT-AAAACACTGATCTTCTTTTTTTGCCATCACTCCAC 39448 Query 21183 TTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAG 21242 ||| ||||| || | |||||||||||||||||| ||||| |||||||||| |||||| Sbjct 39447 ATTTCTGATATTCTCCAACTCTTTTTTCGAAAAAGTTTGTTTTTCCTTCCAGAGATATAT 39388 Query 21243 ATTCCATAAAATCAAATGGATTTTCA 21268 ||||||||||||||||||||||||| Sbjct 39387 GTTCCATAAAATCAAATGGATTTTCA 39362 Score = 138 bits (152), Expect = 1e-27 Identities = 147/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 21500 TCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTT 21559 ||||| ||||| ||||||||||| |||||||| || ||||| | ||||||||||||| Sbjct 25140 TCATCTCTACTGATTAATTCATTGCTGAATGTTAATCCAGGCATCAGTCCTCTCTTTTTT 25081 Query 21560 AACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCA 21619 ||||| ||||||| ||||||| || ||||| || || || ||||| ||||||||||| Sbjct 25080 AACCAGAATATTGCTGCAAATGAACCAGAAAAAAATATTCCTTCAACAGCAGCAAATGCT 25021 Query 21620 ACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTGCC 21679 || | |||||||| |||| || | ||| ||||| ||| |||||| | || Sbjct 25020 ACAACACGTTCACCAAATGTGGAAGTTGAATCATTAATCCAATTTATTGCCCAATCAGCT 24961 Query 21680 TTTTCTTTAATACA 21693 ||| ||||| ||| Sbjct 24960 TTTCTTTTAACACA 24947 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 21861 CCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAA 21920 |||| |||||||| ||||| |||||||| || |||||||| || || | || | |||| Sbjct 19925 CCAAATTTTCATTAACTATACCATCACTAGCAGCAAAAAAAGCTAAAACATGTGAAATAA 19866 Query 21921 AATATCGTTCGTTATCTGTTAATTTTTTCCAATCTAATAAATCTTTTGATAAATCTACTT 21980 ||| | ||| | || | | || ||||| | | |||||| || | |||||||| Sbjct 19865 AATGTTTTTCATCTTCATTCAGACGTTCCCAATGAACCATATCTTTAGAAAGATCTACTT 19806 Query 21981 CTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATCATTATATA 22040 |||| |||||| || ||| ||| || |||||||| ||||||||| |||| Sbjct 19805 CTTCTACTGTCCAGAATGAAGCTTCAGCTTTCTTATACATTTGCCAGATATCTGGATATT 19746 Query 22041 TTATTGGAAATATTACAAA 22059 || ||||| || ||||| Sbjct 19745 CAATAGGAAAGATGACAAA 19727 >seq73121 Length=35095 Score = 134 bits (148), Expect = 1e-26 Identities = 527/819 (64%), Gaps = 38/819 (5%) Strand=Plus/Plus Query 131384 AAGATGTTATTACCTATGGTGAATAAACGAATTTATAGATTAAACGACATACAAATAATA 131443 || ||||||||||| || |||||| |||| |||| ||| | | ||| || | Sbjct 20613 AAAATGTTATTACCAGGAGTAAATAAAAGAATATATAACTTACAAAGTAAACAGTTAGTG 20672 Query 131444 AAATTATTTAGTAAAATATTTAATCATGAT-ATTAAAGATATGTTAAATGATCTAGAAAA 131502 |||||||||||| ||||||||||| || || ||| ||| | | ||| | ||||| Sbjct 20673 AAATTATTTAGTCAAATATTTAATGCAAATCATGGAAGC-ATGCTTGAAGATTTGGAAAA 20731 Query 131503 AGGATATGTTGCAGACACCATAAAAACATTTTTTGAAACCAGTAAAACTGATA-TTAT-- 131559 ||| ||||||| || ||||||| || |||||||||| ||| || || || | Sbjct 20732 TGGAGATGTTGCTGAGACCATAAGAATATTTTTTGAAG--AGT----CTTCTAGTTGTCC 20785 Query 131560 TCCAATAAATAGAAGTATTTNNNNNNNNNNNNNNNNNNNNNNNTTTTTACAACACTTATC 131619 ||||||||| | ||||| || | |||| || | | || Sbjct 20786 TCCAATAAAAAAAAGTAATTTAACTTTAAAAGAAGTTGACAAATATTTAGAAGAACTGTC 20845 Query 131620 TACATTAACAAAGGAAAATGATCAAATAAACTTTTTAA-ATATGTTAGCAAAAGTATGTA 131678 | ||||||||||| | || ||||| || | || | | ||| |||| |||| Sbjct 20846 AAATGTAACAAAGGAAGAGGAGCAAATGAATATACTACGAAAAATTACACAAAGG-TGTA 20904 Query 131679 CCGGAAATGATTTAAAATGTATTATATTACTT-ATTAAAAATGATTTACAAATAAAAGCA 131737 | ||||||||||||||| || || | ||| ||||| |||||||| | | || || Sbjct 20905 CTGGAAATGATTTAAAAATGATAAT-TCGCTTGATTAATCATGATTTAAGATTTAATGCT 20963 Query 131738 GGTATAAAATGTGTCCTTGATTCTTTACATCCAAATGCATATAATTACTTTAAAACATCT 131797 || ||| | | | ||| | | ||| | ||||||| | ||| | |||| Sbjct 20964 GGACCAAAGCATATTTTGGATGGTATTCATACTTCTGCATATGAAGCATTTCAGGCATCA 21023 Query 131798 CATAATTTAAGAGATATTGTT-AAATACTCAAT-----------AAATGATTCATT--AT 131843 || |||||| || |||| || ||| | | ||| |||||| | | || Sbjct 21024 CACGATTTAAAAGCTATTATTGAAAGAATTAATGAAGATGGTAAAAATGAAGAAATTAAT 21083 Query 131844 CTAATGTAAAGATT---AATCCTATGACTCCTGTTAAACCTATGTTGGCTGATGTATGCG 131900 || | || ||| |||| ||||||||| || ||| ||| | ||||| || Sbjct 21084 TTATCGAAACAATTGACAATC--ATGACTCCTATTCGACCAATGCTTGCTGAACCTTGTC 21141 Query 131901 AATCTCTAGAAAAAGCAATAGATAAATATAAAGATGGAATGTATTCAGAGGTAAAATATG 131960 |||| ||||| | || | | |||| | | |||| |||||| | || | ||||||| Sbjct 21142 GATCTATAGAATATGCTTTTAAAAAATGTCCAAATGGTATGTATGCTGAAATTAAATATG 21201 Query 131961 ATGGGGAGCGTGTACAAATTCATAAAAAAGATAATGTATACAATTATTTTAGTAGAAATT 132020 |||| |||||||| ||| ||||||| |||| | || || | ||||||||| ||| || Sbjct 21202 ATGGAGAGCGTGTTCAAGTTCATAAGAAAGGTGATAAATTTACATATTTTAGTCGAAGTT 21261 Query 132021 TAAAACCTGTTCTTACTCATAAAATTGAT-GGATTTGATAAACTGT-TGACTGATGCATT 132078 ||||||| || | |||||||| || |||| | | || | | || | || || Sbjct 21262 TAAAACCAGTACAACAACATAAAAT--ATCACATTTTAAAGACCATATAGCTAAAGCTTT 21319 Query 132079 TCCCACAGCAAAAAACTTCATTTTAGATGCGGAATTAATAATGATAGATACAAAATCAAA 132138 || || |||| | || ||| | ||| || | | | ||||||||||| || | Sbjct 21320 TCATCAAGGAAAAGATTTAATTCTTGATTGTGAGATTCTTCTATTAGATACAAAAACAGA 21379 Query 132139 TTCATTTTTACCATTTGGTTCATTAGGTATACATAAAAA 132177 | |||||| ||||| | |||||| | |||||||| Sbjct 21380 CAAACCTTTACCTTTTGGAACTTTAGGTGTTCATAAAAA 21418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531286401385920