Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq76348 147 3e-30 seq45383 136 5e-27 seq84422 122 1e-22 seq73121 114 2e-20 seq55348 98.7 1e-15 seq89448 87.8 2e-12 >seq76348 Length=48548 Score = 147 bits (162), Expect = 3e-30 Identities = 159/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33745 ||||||||||||| ||||| || ||||| || |||||||| || || |||||| |||| Sbjct 19925 CCAAATTTTCATTAACTATACCATCACTAGCAGCAAAAAAAGCTAAAACATGTGAAATAA 19866 Query 33746 AATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTT 33805 ||| |||||| ||| | || | ||||| | ||||||||||| | |||||||| Sbjct 19865 AATGTTTTTCATCTTCATTCAGACGTTCCCAATGAACCATATCTTTAGAAAGATCTACTT 19806 Query 33806 CTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATT 33865 |||| |||||||| ||||| || || || || |||||||| | |||||| || ||||| Sbjct 19805 CTTCTACTGTCCAGAATGAAGCTTCAGCTTTCTTATACATTTGCCAGATATCTGGATATT 19746 Query 33866 GGATTGGGAAAATAACAAATCTATTTGGATT 33896 || || || || ||||| | ||||||| Sbjct 19745 CAATAGGAAAGATGACAAAACGTCTTGGATT 19715 Score = 114 bits (126), Expect = 2e-20 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 33096 AACATTATA--AAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCT 33153 ||||||||| || || || |||| |||||| | | |||||| || || ||||| Sbjct 25448 AACATTATACAAACCTTATTGCATCCTAATTCAACTAGAAGTCTATCTGCTACAAATTCA 25389 Query 33154 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTA 33213 |||||| | |||| | | |||||||||||| |||||| ||| |||||||| | || Sbjct 25388 ATATATCGTCTCATAAGATTACAATTCATTCCAATAAGTGCAACAGGAAGAGCTTCTGTT 25329 Query 33214 AGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTC 33273 |||||||||||||| || ||| |||||| | || || | ||| | |||| Sbjct 25328 AGAAATTCTTGTTCTATTACTACTGCATCTTTGATTATTTGTATAATTCTCTCTTTGGAG 25269 Query 33274 GGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 33328 ||| || | ||||| | ||||| |||||||| ||||| || || ||||||| Sbjct 25268 GGTTTATTTACCAAATGACTGAACATTAAACATGCAAAATCACAATGGAGACCCT 25214 Score = 107 bits (118), Expect = 2e-18 Identities = 111/146 (76%), Gaps = 3/146 (2%) Strand=Plus/Minus Query 32957 TTTAAAAGTCAACATCTAAAGAAAAA---TGATTATCTTCTTGAGACATAACTCCCATTT 33013 ||||||| || |||| || | |||| |||| |||| || | ||| ||||| || Sbjct 39504 TTTAAAAATCTGCATCAAATGTAAAACACTGATCTTCTTTTTTTGCCATCACTCCACATT 39445 Query 33014 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33073 | || ||||| || || | |||||||||||| || ||||||||||||| ||||||| || Sbjct 39444 TCTGATATTCTCCAACTCTTTTTTCGAAAAAGTTTGTTTTTCCTTCCAGAGATATATGTT 39385 Query 33074 CCATGAAATCAAACGGATTNNNAACA 33099 |||| |||||||| ||||| |||| Sbjct 39384 CCATAAAATCAAATGGATTTTCAACA 39359 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 33536 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTAT 33595 ||||||||| | | | |||||| | |||| || ||||||||| || || ||||||| Sbjct 21768 CATTAAAGAAAAATTACCTTTCATCAGGATCTGAAATATAAGTATCAATTAACAGACTAT 21709 Query 33596 ACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGG 33655 ||||||| ||||||| ||||| || | || || ||||| || || || | || || | Sbjct 21708 ACATTTCTGAATGAACATTTTCTATTGAAATTTGGAATCCATAAAAGCAGCGTGCTTCAG 21649 Query 33656 TAATCTGTACTTCT 33669 ||| || |||||| Sbjct 21648 TAACTTGAACTTCT 21635 >seq45383 Length=59856 Score = 136 bits (150), Expect = 5e-27 Identities = 114/140 (81%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 63609 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 63668 |||||| | |||||||| | ||||| ||||| || ||||||||||||||||| | || Sbjct 46157 CTAGTTGCAGCATTAAAAAGAGTAGGTGAAGCATGTGTAAACCATTTTTCAGATAATAAT 46098 Query 63669 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 63728 || ||||||||||| || || || ||||| || ||| ||||||| || ||||||||| Sbjct 46097 TTATACGTCTCAATTGCAGAATCAATATCTTCTTTATGTATTCCTATGGCTACACGCATT 46038 Query 63729 AACATGTGCTGAGGTCTTTC 63748 ||||| |||||||||||||| Sbjct 46037 AACATATGCTGAGGTCTTTC 46018 Score = 107 bits (118), Expect = 2e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 63171 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63230 |||||||||| ||||||||||| |||||| | ||| | | |||| | |||||| Sbjct 54657 GGACATTCATGAGGACACATCAATGACCACATATCATCAGCTTCAACTCTCTGCATAAAT 54598 Query 63231 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 63290 | ||| ||||||||||| || ||||| ||| | || | ||| || ||||| ||| Sbjct 54597 AAATCGGGAATCCAAAGTGCATAAAATAAATCACGGGCACGGCATTCTTCTTTTCCAGTA 54538 Query 63291 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63349 || ||||| | |||||| || | | ||| || | |||||| |||||||| ||||| || Sbjct 54537 TTTTTTTTTAAATCGAGAAATTCGAAAATGTCTGCATGCCAAGGTTCCAAATATATTGC 54479 >seq84422 Length=160705 Score = 122 bits (134), Expect = 1e-22 Identities = 112/142 (79%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 62063 CCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATT 62122 |||||| || ||||||||||| |||||||| ||| | || || || ||||| ||||| Sbjct 8654 CCATCCATAGAAATGCATACTTGTTAGTTTTCCATAGTTTGGTTCAGCAATATGAATATT 8713 Query 62123 CATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTT 62182 | || || |||||||| ||||| ||||| || ||||||||||||||||| || | || Sbjct 8714 TAACGACTGGCTTTGATCAATGAAAGCTCCTCTATCTGCAGCCATTTTTATAATGGATTT 8773 Query 62183 TTGTGGAATTTCCCAAATAGTT 62204 ||| | |||||||||| |||| Sbjct 8774 TTGAGATATTTCCCAAACAGTT 8795 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 62336 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62395 ||| |||||||||||||| || ||||| | ||||||||||| ||||| || || | Sbjct 9112 TACCTGAAATTCTCCAGATAAAACTCTTCTCACATAAATATTACTTGTATAAGGCTCTAT 9171 Query 62396 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62455 || |||||||| || | |||||| ||||| || ||||| ||||| || | | | || Sbjct 9172 TGATTCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTTGGCATTGGAGAAATAAGCAA 9231 Query 62456 ACTATTTCTAAGACCGTAT 62474 ||||||||| | ||| ||| Sbjct 9232 ACTATTTCTTATACCATAT 9250 >seq73121 Length=35095 Score = 114 bits (126), Expect = 2e-20 Identities = 677/1062 (64%), Gaps = 43/1062 (4%) Strand=Plus/Plus Query 156558 ATGACTCCAATTAATCCCATGTTAGCGGAATCGTGTGATTCTGTCAATAAGGCGTTTAAA 156617 |||||||| ||| || ||| | || ||| | ||| ||| | | | || |||||| Sbjct 21105 ATGACTCCTATTCGACCAATGCTTGCTGAACCTTGTCGATCTATAGAATATGCTTTTAAA 21164 Query 156618 AAATTTCCATCAGGAATGTTTGCGGAAGTCAAATACGATGGTGAAAGAGTACAAGTTCAT 156677 |||| |||| || |||| ||| ||| | ||||| ||||| || | || ||||||||| Sbjct 21165 AAATGTCCAAATGGTATGTATGCTGAAATTAAATATGATGGAGAGCGTGTTCAAGTTCAT 21224 Query 156678 AAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCTCTCATAAA 156737 || || | | | ||| | | |||||| ||| | |||||||||| |||||| Sbjct 21225 AAGAAAGGTGATAAATTTACATATTTTAGTCGAAGTTTAAAACCAGTACAACAACATAAA 21284 Query 156738 GTGGATTATCTCAAAGAATACATACCGAAAGCATTTAAAAAAGCTACGTCTATCGTATTG 156797 | || | ||||| | ||| | ||||| ||| | ||| | | | | | Sbjct 21285 ATATCACATTTTAAAGACCATATAGCTAAAGCTTTTCATCAAGGAAAAGATTTAATTCTT 21344 Query 156798 GATTCTGAAATTGTTCTTGTAGA--CGAACATA-ATGTACCGCTCCCGTTTGGAAGTTTA 156854 |||| ||| ||| |||| |||| | || | | | ||| | || ||||||| |||| Sbjct 21345 GATTGTGAGATTCTTCTATTAGATACAAAAACAGACAAACCTTTACCTTTTGGAACTTTA 21404 Query 156855 GGAATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGTTTGACTGT 156914 || | || |||||| | | |||| | ||| | |||||||| || ||||||||| Sbjct 21405 GGTGTTCATAAAAAGGCTGCTTTTAAAGATGCTACTGTTTGTTTGTTTGTATTTGACTGT 21464 Query 156915 TTGTACTTTGATGGATTCGATATGACGGACATTCCATTGTACGAACGAAGATCTTTTCTC 156974 | || | | |||| ||| | | |||| | | | | ||| |||| |||| Sbjct 21465 ATATATTATAATGGTAAAGATCTAATGGACTGTACTCTCAAAGAAAGAAGGAAAATTCTT 21524 Query 156975 AAAGATGTTATGGTTGAAATACCCAATAGAATAGTA----TTCTCAGAG----TTGACGA 157026 |||| |||| ||| | || | ||| || |||| | | || | | Sbjct 21525 CAAGAAAATATGCAAGAAGTTA--AAGATCATATTAAATTTTCTGAAATGAAATTAATCA 21582 Query 157027 ATATTAGTAACGAGTCTCAGTTAACTGACGTATTGGATGATGCACT-AACGAGAAAATTA 157085 | | ||| || || | | ||| || ||| ||| ||| | || || | ||| Sbjct 21583 AAAATAGAAAAGAAT-TAAGTGAAATGATAAATTT-----TGCCTTCAAACAGGGA-TTA 21635 Query 157086 GAAGGATTGGTCTTAAAAGATATTAATGGAGTA--TACGAACCGGGAAAGAGAAGATGGT 157143 ||||| | || || |||||| || |||| ||| |||| || || | ||| Sbjct 21636 GAAGGTCTTGTTTTGAAAGATCC--ATCAAGTACTTACAAACCAGGGAAACGTCATTGGC 21693 Query 157144 TAAAAATAAAGCGAGACTATTTGAACGAGGGTTCCATGGCAGATTCTGCCGATTTAGTAG 157203 | || | || ||| ||| | | || ||| ||||| ||| ||| || ||||| | Sbjct 21694 TTAAGGTGAAAAAAGATTATCTCCATGAAGGTAGTATGGCCGATAGTGCTGACTTAGTTG 21753 Query 157204 TACTAGGTGCTTACTATGGTAAAGG-AGCAAAGGGTGGTATCATGGCAGTCTTTCTAATG 157262 | ||||||| || | ||||| || |||||||| || || ||| | | ||| | ||| Sbjct 21754 TTTTAGGTGCATATTTTGGTACTGGTAGCAAAGGAGGG-ATGATGTCTATTTTTTTGATG 21812 Query 157263 GGTTGTTACGACGATGAATCCGGTAAATGGAAGACGGTTACCAA-GTG--TTCAGGACAC 157319 || |||| || | ||| |||||| || ||||| || || | |||||| Sbjct 21813 GGATGTTTTGATAAGAGGTCCCAGAAATGGTGTACTGTTACTAAAGTACATGGAGGACAT 21872 Query 157320 GATGATAATACGTTAAGGGTTTTGCAAGACCAATTAACGATGGTTAAAATTAACAAGGAT 157379 |||| ||| || ||| ||||| ||||||||| | || || || Sbjct 21873 ACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTTAAAGTCAATAATGAA 21932 Query 157380 CCCaaaaaaaTTCCAGAGTGGTTGGTAGTTAATAAAATCTATA-TTCCCGATTTTGTA-G 157437 | | ||||| || |||||| ||||| ||| ||| || ||||||||||||| | Sbjct 21933 ---ATGGATATTCCTGAATGGTTGAATGTTAA-AAAGTCTTTAATTCCCGATTTTGTTTG 21988 Query 157438 TAGAGGATCCGAAACAATCTCAGATATGGGAAATTTCAGGAGCAGAGTTTAC---ATCTT 157494 || || |||| ||| |||||| | |||||||| |||| ||||| ||| | | || Sbjct 21989 TAAAG-ATCCAAAAACATCTCAAGTTTGGGAAATAACAGGTGCAGAATTTTCTAAAGCTG 22047 Query 157495 CCAAGTCCCATACCGCAAATGGAATATCCATTAGATTTCCTAGATTTACTAGGATTAGAG 157554 ||| | ||||| |||||||||||||| || ||||||||| | |||| ||| | Sbjct 22048 --AAG-CTCATACTGCAAATGGAATATCAATAAGATTTCCTCGTGTTACATTAATTCGTT 22104 Query 157555 AAGATAAAACGTGGAAAGAATCTACTCATCTAAACGATTTAG 157596 | |||||| | ||||||||| | ||| | || | || |||| Sbjct 22105 ATGATAAATCATGGAAAGAAGCAACTACTTTAGAAGAATTAG 22146 >seq55348 Length=21870 Score = 98.7 bits (108), Expect = 1e-15 Identities = 126/172 (73%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 62577 TATGTATCGTATGGTCCT--TCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 62634 || || || |||||||| | ||| | |||| ||||||||| || ||||||||||| | Sbjct 9522 TAAGTTTCATATGGTCCAAATTCTTGT--GCTAATTCACAACTTGCTTCTAATGCACCAT 9465 Query 62635 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 62694 ||||||| ||||| || || | | |||| | |||||||| |||||||| |||| Sbjct 9464 AATAAATAGTTTCAAAAATTTCAATGTTTAATTTCTGTGCTTCTTCACTATCAAAAGGAT 9405 Query 62695 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGG 62746 | | || |||||| | || |||||||||||||||| || || || || Sbjct 9404 ACCTCAAAGAAATAAATGTATCTGCTAATCCTTGAACACTTATTCCTATCGG 9353 >seq89448 Length=33718 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/112 (78%), Gaps = 3/112 (3%) Strand=Plus/Minus Query 28477 ACCTGAGTTAGTGATCTCCAATCCATGTTAGCGCTTCCTAAATAAATATGTGTATTATCA 28536 |||||||||| || | ||| ||||| ||||| ||||| | ||||| ||| |||||| Sbjct 5355 ACCTGAGTTAATGCACGCCAGTCCATATTAGCACTTCCAATATAAAAATGCTGATTATCT 5296 Query 28537 GATATCCAAAATTTTGTATGAAGAACTCC---TCCTAGGATATTTGTAATAT 28585 |||||||||||||||||| |||||||| ||| || | ||||||| || Sbjct 5295 ATTATCCAAAATTTTGTATGGAGAACTCCACTTCCAAGAAGTTTTGTAAAAT 5244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622227633689280