Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_007046.1 Length=18199 Score E Sequences producing significant alignments: (Bits) Value seq88054 316 2e-82 >seq88054 Length=21660 Score = 316 bits (350), Expect = 2e-82 Identities = 706/1052 (67%), Gaps = 12/1052 (1%) Strand=Plus/Minus Query 1008 TTCGAAACATTTGTAAATAAATATTTATTCCCTAAGATTAACGAGACTTTATTAATCGAT 1067 || || || | | |||| || | ||||||||| || || | || ||||||||||| ||| Sbjct 21007 TTTGAGACTTATATAAACAAGTTTTTATTCCCAAAAATAAGTGAAACTTTATTAATTGAT 20948 Query 1068 ATTGCATTAGGTAATCGTTTTAATTGGTTAGCTAAAGAGCAAGATTTTATTGGACAATAT 1127 || ||||||||||||||||||||||||||| |||| ||||| ||||| Sbjct 20947 CAAGCCGTAGGTAATCGTTTTAATTGGTTAGCTAGAGAGGTTCCCGTTATTTCACAATTA 20888 Query 1128 AGTGAAGAATACGTGATTATGGACACAGTACCAATTAACATGGACTTATCTAAAAATGAG 1187 | ||| ||||| || | | || || || || || ||| | |||||||||| ||| Sbjct 20887 ACTGAGGAATATGTTTATTTAGATACTGTTCCTGTTGGGATGAATTTATCTAAAAGTGAA 20828 Query 1188 GAATTAATGTTGAAACGTAATTATCCACGTATGGCTACTAAGTTATATGGTAACGGAATT 1247 || |||||||| ||| | ||||||| |||||||| || |||||||| || Sbjct 20827 GATTTAATGTTAAAAAGACATTATCCTCGTATGGCAACACGTTTATATGGGCCGGGCGAG 20768 Query 1248 GTGAAGAAACAAAAATTCACATTAAACAACAATGATACACGTTTCAATTTCCAAACATTA 1307 | ||||| || ||||| || ||||| | || ||| | | |||||||| ||| ||| Sbjct 20767 TTTAAGAAGCAGAAATTTACGTTAAATGATAACGATGTAAGATTCAATTTTTTAACTTTA 20708 Query 1308 GCAGACGCAACTAATTACGCTTTAGGTGTATACAAAAAGAAAATTTCTGATATTAATGTA 1367 | || || | || | || | || |||| || || |||||| || |||||| || Sbjct 20707 GGTGATGCTATTAGTGCAGCACTTGGGGTATTAAATAAACGAATTTCGGACATTAATATA 20648 Query 1368 TTAGAAGAAAAAGAAATGCGTGCAATGTTAGTTGATTACTCATTGAATCAATTATCCGAA 1427 | ||||||| |||||| || |||||| | |||||| || || |||||| || Sbjct 20647 TCTGAAGAAAGAGAAATAAAAGCTATGTTAATCGATTACAGTTTAAACCAATTAAATGAT 20588 Query 1428 ACAAATGTACGTAAAGCAACATCAAAAGAAGATTTAGC--AAGCAA-AGTTTTTGAAGCA 1484 ||||| | | | | ||| || |||| |||| ||| || || ||| ||| Sbjct 20587 TCAAATAAAAGGACTGTAACGAGTGAACAAGACGTAGCTGAAGAAATAGCTTT---AGCC 20531 Query 1485 ATCCTAAACTTACAAAACAACAGTGCTAAATATAATGAAGTACATCGTGCATCAGGTGGT 1544 || | ||| | ||||| |||| ||||| |||| || || ||||| ||| Sbjct 20530 ATTTTCAACATTCAAAATCCTAGTGAATTGTATAACGAAGCTAATAAAGCTTCAGGAGGT 20471 Query 1545 GCAATTGGACAATATACAACTGTATCAAAATTAAAAGATATTGTGATTTTAACAACAGAT 1604 ||||| |||| ||| | ||| || || | | |||||||| || ||||||| ||| Sbjct 20470 GCAATAGGACGTTATTCGACTCTAACAGATATTGAAGATATTTGTATAGTAACAACGGAT 20411 Query 1605 TCATTAAAATCTTATCTTTTAGATACTAAG--ATTGCAAACACATTCCAGATTGCAGGCA 1662 || |||||||| ||| | ||| || ||| || || || || ||| || Sbjct 20410 AAATATAAATCTTA--CTTTGTAAACTCAGTTGTTGGTAATACTTTTCAAGCTGCTGGTT 20353 Query 1663 TTGATTTCACAGACCACGTTATTAGTTTTGACGACTTAGGTGGCGTGTTTAAAGTAACAA 1722 | ||| || | | ||||| ||||| || ||||| || | |||| ||| Sbjct 20352 TAGATCCTACGAATCGAATTATTTCGTTTGATACTTTGGGTGGTGTTTATAAAACAACTG 20293 Query 1723 AAGAATTTAAGTTACAAAACCAA-GATTCAATCGACTTTTTACGTGCTTATGGAGATTAT 1781 | || ||| ||| | || || ||| | || | | |||||| |||||||| |||||| Sbjct 20292 ATGATATTACTTTA-AGTACTAATGATACGATTAATTATTTACGGGCTTATGGTGATTAT 20234 Query 1782 CAATCACAATTAGGAGATACAATTCCAGTTGGTGCAGTATTTACTTACGATGTCTCTAAA 1841 ||||||||| || |||| || || | | | |||||||| | |||| || || Sbjct 20233 CAATCACAAAAAGATGATATTATACCTAAAGATTCCGTATTTACATTTAATGTTTCAGAA 20174 Query 1842 CTTAAAGAGTTTACTACTAACGTTGAAGAAATTAAACCAAAATCAGATTTATATGCGTTT 1901 | | || |||| ||| |||| ||||||||||||||| ||| | ||||||||| Sbjct 20173 TTAAGTGAATTTAAGGGTAAAGTTGTTGAAATTAAACCAAAAAGTGATCTTTATGCGTTT 20114 Query 1902 ATTTTGGATATTAATTCAATTAAATATAAACGTTACACAAAAGGTATGTTAAAACAACCA 1961 || || ||||||||| || || |||||| || || || ||||| ||| |||| Sbjct 20113 ATATTTGATATTAATATGCTTCGTTACAAACGTAGTACTAAGGGAATGTTTAAAGAACCG 20054 Query 1962 TTCCATAACCCTGAATTTGATGAAGTCACACACTGGATTCATTACTATTCATTTAAAGCC 2021 || | || || ||||| ||||| | || ||||| |||| || || |||||||| Sbjct 20053 TTTAACAATCCAGAATTCAATGAAATAACTTACTGGCTTCACTATTACAGTTTTAAAGCT 19994 Query 2022 ATTAGTCCATTCTTTAATAAAATTTTAATTAC 2053 ||| || || | |||||||||||||||||| Sbjct 19993 ATTTCACCTTTTTATAATAAAATTTTAATTAC 19962 Score = 143 bits (158), Expect = 3e-30 Identities = 328/488 (67%), Gaps = 17/488 (3%) Strand=Plus/Minus Query 2569 TGATATAGAAATTATAGAACATTATACTGATGAATTAGCCGAAGTCGCTTTATCTCGCTT 2628 |||| || ||||||| ||||||||| || ||||||||| ||| | | | ||| | | Sbjct 19468 TGATTTACAAATTATTGAACATTATTGTGCTGAATTAGCTGAAATAGTAGTTTCTAGATA 19409 Query 2629 TTCTTTAATCATGCAAGCAAAATTTAGCAAGATATTTAAATCAGAAATTAATGACGAGTC 2688 ||| | | ||||| ||||| | | | || | ||||||||| ||| || | Sbjct 19408 TTCAGTGACTATGCAGTCAAAAATGATGACCATTATACGATCAGAAATAGGTGATGAAAC 19349 Query 2689 AATCAATCAACTTGTGTCCGAAATATATAACGGTGCACCATTTGTTAAAATGTCACCTAT 2748 | | ||||||||||| || || ||||||| || | || ||| | ||| | | | | Sbjct 19348 AGTTAATCAACTTGTTTCTGATTTATATAATGGGTCTCCTTTTATAAAAGCGAGTCATCT 19289 Query 2749 GTTTAATGCAGATGACGATATCATTG-ATTTAACAA----GTAATAGCGTAATCCCAGCA 2803 ||| || |||| || | | ||| |||| | || || | || |||| | Sbjct 19288 TTTTGATCCAGAGGATCAGTTAATTACATTTGATAACTCGGTTGTGGC-TAATTT----A 19234 Query 2804 TTAACTGAAATGAAACGGGAATATCAAAACAAAATTAGTGAATTAAGTAACTATTTAGGC 2863 | |||||| | ||||| |||||||||||||||||| |||| |||| || | |||||| Sbjct 19233 CTTACTGAATTAAAACGTGAATATCAAAACAAAATTGGTGAGTTAAACAATTTTTTAGGT 19174 Query 2864 ATTAATTCATTAGCCGTTGATAAAGAAAGCGGTGTTTCAGACGAAGAGGCAAAAAGTAAT 2923 | ||| || || || || ||| |||||||||||| || | || |||||||||||| Sbjct 19173 TTAAATAGTTTGGCTGTAGAAAAAACAAGCGGTGTTTCCGATGTTGAAGCAAAAAGTAAT 19114 Query 2924 CGTGGATTTACCACATCAAACAGTAATATCTATTTAAAAGGTCG--TGAACCAATT---A 2978 || | ||||||||| || | || || || | ||||| || | |||| | | Sbjct 19113 CGAGCTTTTACCACAAATAATGGAAACATTTACATCAAAGGACGTTTAAACCCTCTTCAA 19054 Query 2979 CGTTTTTATCAAAGCGTTATGGTTTAGATATTAAACCGTATTACGATGATGAAACAACGT 3038 ||||| || || || | |||| | ||| | || ||||| || |||||| ||| | Sbjct 19053 TGTTTTAAT--AAACGATTCAATTTAAACATTTATCCTTATTATGACGATGAAGCAATAT 18996 Query 3039 CTAAAATA 3046 ||||| || Sbjct 18995 CTAAATTA 18988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 58056302378448