Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq76947 109 4e-19 seq73005 93.3 3e-14 seq85547 91.5 1e-13 seq81434 86.0 5e-12 >seq76947 Length=48948 Score = 109 bits (120), Expect = 4e-19 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| ||||| || ||||| |||| ||| || || ||||||||||||||||||||||| | Sbjct 23492 CCCACCTCGAAGTCTCAGCACCAAATGAAGAGTAGACTCCTTTTGTATGTTGTAGTCTGA 23551 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | || | || |||| || || || ||| |||| | ||||| || || ||| Sbjct 23552 GAGTGTACGACCATCTTCCAGCTGCTTTCCTGCAAAAATCAAACGCTGCTGATCTGGAGG 23611 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | || || || || || ||||| |||||| | | | ||| || | |||||| Sbjct 23612 AATACCTTCCTTATCTTGGATCTTTGC--CTTCACATTTTCAATAGTATCACTGGGCTCT 23669 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||||| |||||||||||||| || || || || ||||| ||||||||| Sbjct 23670 ACTTCCAAAGTGATGGTTTTTCCAGTGAGTGTCTTCACAAAGATCTGCATT 23720 >seq73005 Length=127446 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 || || || | ||| || || ||||| ||||| || |||||||| | || ||| | Sbjct 43928 CTAAGGACAAGATGGAGTGTTGACTCTTTTTGGATATTGTAGTCAGACAAGGTGCGACCA 43869 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || ||||| || ||||| ||| | || | || || || || ||| | || |||||| Sbjct 43868 TCTTCCAACTGCTTGCCAGCAAAGATCAATCGTTGCTGATCTGGAGGTATTCCTTCTTTG 43809 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || |||| |||||| | | | |||||| | ||| || ||||| |||||| Sbjct 43808 TCTTGGATTTTAGCCTTCACATTCTCAATAGTGTCACTGGGTTCTACTTCCAGGGTGATA 43749 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || || || ||||| ||||||||||| || |||||| Sbjct 43748 GTCTTGCCTGTCAGTGTTTTGACAAAGATTTGCATT 43713 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || ||||| || |||| || || ||| |||||||| ||||||||||| | Sbjct 43484 CCACCACGCAGCCTGAGAACCAAGTGAAGGGTGCTTTCCTTTTGAATGTTGTAGTCAGAT 43425 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | | || ||||| || ||||| ||| | || || ||||| || || ||| Sbjct 43424 AATGTGCGGCCATCTTCCAACTGCTTGCCAGCAAATATCAGACGCTGCTGATCTGGAGGA 43365 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || |||||||| || ||||| ||| || | | | || || | ||||| Sbjct 43364 ATTCCTTCTTTGTCCTGGATCTTTGC--CTTTACATTTTCAATGGTATCACTTGGCTCTA 43307 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||||| || ||||| || || |||| ||||| ||||||||||||||| Sbjct 43306 CTTCCAGAGTAATGGTCTTGCCTGTCAAAGTTTTAACAAAAATCTGCATT 43257 Score = 86.0 bits (94), Expect = 5e-12 Identities = 151/218 (69%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 || || || | ||| || || ||||| ||||| ||||||||||| | || ||| | Sbjct 43700 CTGAGAACAAGATGGAGTGTTGACTCTTTTTGGATGTTGTAGTCAGACAAGGTGCGACCA 43641 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 || ||||| || || || ||| | || | ||||||||||| ||| | ||| |||||| Sbjct 43640 TCTTCCAACTGCTTCCCAGCAAAGATCAAACGCTGTTGGTCAGGAGGAATGCCTTCTTTG 43581 Query 16841 TC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGA 16898 || || |||||| || || | | | || || | ||| || ||| | || | Sbjct 43580 TCTTGGATTTTTGCT--TTGACATTTTCTATTGTATCACTGGGTTCAACTTCTAAAGTTA 43523 Query 16899 TGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 | ||||| || || || || |||||||| ||||||||| Sbjct 43522 TTGTTTTACCAGTGAGTGTCTTGACAAATATCTGCATT 43485 Score = 84.2 bits (92), Expect = 2e-11 Identities = 160/233 (69%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || || || || | ||||| ||||| || || || ||||| ||||| | | Sbjct 44168 CCACCACGCAGTCTAAGAACAAGATGCAAGGTGGATTCTTTCTGAATGTTATAGTCTGAC 44109 Query 16769 ATGGTTTTGGCGTCC----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCAC 16824 | ||| |||||| ||||| ||||| || ||| |||| | || ||| || || Sbjct 44108 AAGGT----GCGTCCATCTTCCAACTGTTTTCCTGCAAAAATTAACCTCTGCTGATCTGG 44053 Query 16825 AGGCACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGC 16882 || | || || ||||| ||||| ||| || || | | | ||||||| ||| Sbjct 44052 TGGAATACCTTCCTTGTCCTGAATTTTGGCT--TTTACGTTTTCTATGGTGTCGCTCGGC 43995 Query 16883 TCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||| | |||||||| || || ||||| || || |||||||||||||| Sbjct 43994 TCTACTTCTAATGTGATGGTCTTGCCAGTCAGTGTCTTAACAAAAATCTGCAT 43942 >seq85547 Length=49496 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/234 (69%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | ||||||| || || || || |||||||| || || || || | Sbjct 24667 CCTCCTCTTAAACGAAGTACCAAGTGAAGTGTCGATTCCTTTTGAATATTATAATCTGAT 24608 Query 16769 ATGGTTTTGGCGTCC----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCAC 16824 | ||| |||||| || || |||||||| ||| | || | |||||||| || Sbjct 24607 AAGGT----GCGTCCATCTTCTAACTGTTTGCCTGCAAAGATCAAACGCTGTTGATCGGG 24552 Query 16825 AGGCACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGC 16882 ||| | || ||||| || ||||| ||| || || | | | ||||| | ||| Sbjct 24551 AGGAATTCCTTCTTTATCTTGAATTTTAGCT--TTTACATTCTCAATGGTGTCACTTGGC 24494 Query 16883 TCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||| ||||| ||||||||| || || || | ||||| ||||||||||||||| Sbjct 24493 TCCACTTCCAAGGTGATGGTCTTCCCTGTTAATGTTTTAACAAAAATCTGCATT 24440 >seq81434 Length=18142 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||||| || | || |||| || | || |||||||| || ||||| ||||| | Sbjct 9284 CCTCCTCTGAGACGAAGAACCAAGTGTAATGTAGACTCCTTCTGAATGTTATAGTCAGAA 9225 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || |||| |||| ||| || || ||| ||||||||| ||| || || ||| Sbjct 9224 AGAGTACGACCGTCTTCCAGTTGCTTCCCTGCAAAAATAAGCCTCTGCTGATCGGGAGGA 9165 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||| ||||| || ||||| | ||||| | | | || || | ||||| | Sbjct 9164 ATGCCTTCTTTATCTTGAATTTTTTCTTTCACATTTTCTATTGTATCACTTGGCTCTACT 9105 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || || || || || ||||| || || |||||||||||||| Sbjct 9104 TCCAGTGTTATTGTCTTGCCAGTCAGGGTCTTCACAAAAATCTGCAT 9058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404631780779920