Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq76348 152 7e-32 seq45383 136 5e-27 seq73121 127 3e-24 seq84422 125 9e-24 seq55348 98.7 1e-15 seq89448 96.9 4e-15 >seq76348 Length=48548 Score = 152 bits (168), Expect = 7e-32 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 33045 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 33104 ||||||||||| ||||| || ||||| || |||||||| || || |||||| |||||| Sbjct 19923 AAATTTTCATTAACTATACCATCACTAGCAGCAAAAAAAGCTAAAACATGTGAAATAAAA 19864 Query 33105 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 33164 | |||||| ||| | || | ||||| | ||||||||||| | ||| |||||| Sbjct 19863 TGTTTTTCATCTTCATTCAGACGTTCCCAATGAACCATATCTTTAGAAAGATCTACTTCT 19804 Query 33165 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGA 33224 || |||||||| ||||| || || || || |||||||| | |||||| || |||||| | Sbjct 19803 TCTACTGTCCAGAATGAAGCTTCAGCTTTCTTATACATTTGCCAGATATCTGGATATTCA 19744 Query 33225 ATTGGAAAAATAACAAATCTATTTGGATT 33253 || ||||| || ||||| | ||||||| Sbjct 19743 ATAGGAAAGATGACAAAACGTCTTGGATT 19715 Score = 114 bits (126), Expect = 2e-20 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 32453 AACATTATA--AAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCT 32510 ||||||||| || || || |||| |||||| | | ||||||||| |||||||| Sbjct 25448 AACATTATACAAACCTTATTGCATCCTAATTCAACTAGAAGTCTATCTGCTACAAATTCA 25389 Query 32511 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTA 32570 |||||| | |||| | | |||||||||||| |||||| ||| |||||||| | || Sbjct 25388 ATATATCGTCTCATAAGATTACAATTCATTCCAATAAGTGCAACAGGAAGAGCTTCTGTT 25329 Query 32571 AGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTC 32630 |||||||||||||| || || || ||| | || || | | | | | |||| Sbjct 25328 AGAAATTCTTGTTCTATTACTACTGCATCTTTGATTATTTGTATAATTCTCTCTTTGGAG 25269 Query 32631 GGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCT 32685 ||| || | ||||| | ||||| |||||||| ||||| || || ||||||| Sbjct 25268 GGTTTATTTACCAAATGACTGAACATTAAACATGCAAAATCACAATGGAGACCCT 25214 Score = 93.3 bits (102), Expect = 5e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 32893 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 32952 ||||||||| | | | |||||| | |||| || ||| |||||||| || ||||||| Sbjct 21768 CATTAAAGAAAAATTACCTTTCATCAGGATCTGAAATATAAGTATCAATTAACAGACTAT 21709 Query 32953 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGG 33012 ||||||| ||||||| ||||| || | ||||| ||||| || ||||| | || || | Sbjct 21708 ACATTTCTGAATGAACATTTTCTATTGAAATTTGGAATCCATAAAAGCAGCGTGCTTCAG 21649 Query 33013 TAATCTGTACTTCT 33026 ||| || |||||| Sbjct 21648 TAACTTGAACTTCT 21635 Score = 93.3 bits (102), Expect = 5e-14 Identities = 108/146 (74%), Gaps = 3/146 (2%) Strand=Plus/Minus Query 32314 TTTAAAAGTCAACATCTAGAGAAAAA---TGATTGTCTTCTTGAGACATAACTCCCATTT 32370 ||||||| || |||| | | |||| |||| |||| || | ||| ||||| || Sbjct 39504 TTTAAAAATCTGCATCAAATGTAAAACACTGATCTTCTTTTTTTGCCATCACTCCACATT 39445 Query 32371 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 32430 | || ||||| || || | |||||||||||| || ||||| ||||| | ||||||| || Sbjct 39444 TCTGATATTCTCCAACTCTTTTTTCGAAAAAGTTTGTTTTTCCTTCCAGAGATATATGTT 39385 Query 32431 CCATGAAATCGAATGGATTNNNAACA 32456 |||| ||||| |||||||| |||| Sbjct 39384 CCATAAAATCAAATGGATTTTCAACA 39359 >seq45383 Length=59856 Score = 136 bits (150), Expect = 5e-27 Identities = 114/140 (81%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 63464 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGA 63523 |||||| | |||||||| | ||||| ||||| || ||||||||||||||||| | || Sbjct 46157 CTAGTTGCAGCATTAAAAAGAGTAGGTGAAGCATGTGTAAACCATTTTTCAGATAATAAT 46098 Query 63524 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 63583 || ||||||||||| || || || ||||| || ||| ||||||| || ||||||||| Sbjct 46097 TTATACGTCTCAATTGCAGAATCAATATCTTCTTTATGTATTCCTATGGCTACACGCATT 46038 Query 63584 AACATGTGCTGAGGTCTTTC 63603 ||||| |||||||||||||| Sbjct 46037 AACATATGCTGAGGTCTTTC 46018 Score = 107 bits (118), Expect = 2e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 63026 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63085 |||||||||| ||||||||||| |||||| | ||| | | |||| | |||||| Sbjct 54657 GGACATTCATGAGGACACATCAATGACCACATATCATCAGCTTCAACTCTCTGCATAAAT 54598 Query 63086 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 63145 | ||| ||||||||||| || ||||| ||| | || | ||| || ||||| ||| Sbjct 54597 AAATCGGGAATCCAAAGTGCATAAAATAAATCACGGGCACGGCATTCTTCTTTTCCAGTA 54538 Query 63146 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 63204 || ||||| | |||||| || | | ||| || | |||||| |||||||| ||||| || Sbjct 54537 TTTTTTTTTAAATCGAGAAATTCGAAAATGTCTGCATGCCAAGGTTCCAAATATATTGC 54479 >seq73121 Length=35095 Score = 127 bits (140), Expect = 3e-24 Identities = 680/1063 (64%), Gaps = 45/1063 (4%) Strand=Plus/Plus Query 155186 ATGACTCCAATTAATCCCATGTTAGCGGAATCGTGTGATTCTGTCAATAAGGCATTTAAA 155245 |||||||| ||| || ||| | || ||| | ||| ||| | | | || |||||| Sbjct 21105 ATGACTCCTATTCGACCAATGCTTGCTGAACCTTGTCGATCTATAGAATATGCTTTTAAA 21164 Query 155246 AAATTTCCATCAGGAATGTTTGCTGAAGTCAAATACGATGGCGAGAGAGTACAAGTTCAT 155305 |||| |||| || |||| ||||||| | ||||| ||||| ||| | || ||||||||| Sbjct 21165 AAATGTCCAAATGGTATGTATGCTGAAATTAAATATGATGGAGAGCGTGTTCAAGTTCAT 21224 Query 155306 AAAAATAATAACGAGTTTGCCTTCTTTAGTAGAAACATGAAACCAGTACTCTCTTATAAA 155365 || || | | | ||| | | |||||| ||| | |||||||||| ||||| Sbjct 21225 AAGAAAGGTGATAAATTTACATATTTTAGTCGAAGTTTAAAACCAGTACAACAACATAAA 21284 Query 155366 GTGGATTATCTCAAAGAATACATACCGAAAGCATTTAAAAAAGCTACGTCTATCGTATTG 155425 | || | ||||| | ||| | ||||| ||| | ||| | | | | | Sbjct 21285 ATATCACATTTTAAAGACCATATAGCTAAAGCTTTTCATCAAGGAAAAGATTTAATTCTT 21344 Query 155426 GATTCTGAAATTGTTCTTGTAGA--CGAACATA-ATGTACCGCTCCCGTTTGGAAGTTTA 155482 |||| ||| ||| |||| |||| | || | | | ||| | || ||||||| |||| Sbjct 21345 GATTGTGAGATTCTTCTATTAGATACAAAAACAGACAAACCTTTACCTTTTGGAACTTTA 21404 Query 155483 GGTATACACAAAAAGAAAGAATATAAAAACTCTAACATGTGTTTGTTCGTGTTTGACTGT 155542 ||| | || |||||| | | |||| | ||| | |||||||| || ||||||||| Sbjct 21405 GGTGTTCATAAAAAGGCTGCTTTTAAAGATGCTACTGTTTGTTTGTTTGTATTTGACTGT 21464 Query 155543 TTGTACTTTGATGGATTCGATATGACGGACATTCCATTGTACGAACGAAGATCTTTTCTC 155602 | || | | |||| ||| | | |||| | | | | ||| |||| |||| Sbjct 21465 ATATATTATAATGGTAAAGATCTAATGGACTGTACTCTCAAAGAAAGAAGGAAAATTCTT 21524 Query 155603 AACGATGTTATGGTCGAAATACCCAATAGAATAGTA----TTCTCAGAG----TTGACGA 155654 | || |||| ||| | || | ||| || |||| | | || | | Sbjct 21525 CAAGAAAATATGCAAGAAGTTA--AAGATCATATTAAATTTTCTGAAATGAAATTAATCA 21582 Query 155655 ATATTAGTAACGAGTCTCAGTTAACTGACGTATTGGATGATGCACT-AACGAGAAAATTA 155713 | | ||| || || | | ||| || ||| ||| ||| | || || | ||| Sbjct 21583 AAAATAGAAAAGAAT-TAAGTGAAATGATAAATTT-----TGCCTTCAAACAGGGA-TTA 21635 Query 155714 GAAGGATTGGTCTTAAAAGATATTAATGGAGTA--TACGAACCGGGAAAGAGAAGATGGT 155771 ||||| | || || |||||| || |||| ||| |||| || || | ||| Sbjct 21636 GAAGGTCTTGTTTTGAAAGATCC--ATCAAGTACTTACAAACCAGGGAAACGTCATTGGC 21693 Query 155772 TAAAAATAAAGCGAGACTATTTGAACGAGGGTTCCATGGCAGATTCTGCCGATTTAGTAG 155831 | || | || ||| ||| | | || ||| ||||| ||| ||| || ||||| | Sbjct 21694 TTAAGGTGAAAAAAGATTATCTCCATGAAGGTAGTATGGCCGATAGTGCTGACTTAGTTG 21753 Query 155832 TACTAGGTGCTTACTATGGTAAAGG-AGCAAAGGGTGGTATTATGGCAGTCTTTCTAATG 155890 | ||||||| || | ||||| || |||||||| || || ||| | | ||| | ||| Sbjct 21754 TTTTAGGTGCATATTTTGGTACTGGTAGCAAAGGAGGG-ATGATGTCTATTTTTTTGATG 21812 Query 155891 GGTTGTTACGATGATGAATCCGGTAAATGGAAGACGGTAACTAAATGTTCA----GGACA 155946 || |||| ||| | ||| |||||| || || |||||| || || ||||| Sbjct 21813 GGATGTTTTGATAAGAGGTCCCAGAAATGGTGTACTGTTACTAAA-GTACATGGAGGACA 21871 Query 155947 CGATGATAATACGTTAAGGGTTTTGCAAGACCAATTAACGATGGTTAAAATTAACAAGGA 156006 |||| ||| || ||| ||||| ||||||||| | || || || Sbjct 21872 TACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTTAAAGTCAATAATGA 21931 Query 156007 TCCCaaaaaaaTTCCAGAGTGGTTGGTAGTTAATAAAATCTATA-TTCCCGATTTTG-TA 156064 | | ||||| || |||||| ||||| ||| ||| || |||||||||||| | Sbjct 21932 A---ATGGATATTCCTGAATGGTTGAATGTTAA-AAAGTCTTTAATTCCCGATTTTGTTT 21987 Query 156065 GTAGAGGATCCGAAACAATCTCAAATATGGGAAATTTCAGGAGCAGAGTT---TACACCT 156121 ||| | ||||| ||| ||||||| | |||||||| |||| ||||| || || | || Sbjct 21988 GTA-AAGATCCAAAAACATCTCAAGTTTGGGAAATAACAGGTGCAGAATTTTCTAAAGCT 22046 Query 156122 TCCAAGTCACATACAGCGAATGGAATATCGATTAGATTTCCTAGATTTACTAGGATTAGA 156181 ||| | ||||| || ||||||||||| || ||||||||| | |||| ||| | Sbjct 22047 --GAAG-CTCATACTGCAAATGGAATATCAATAAGATTTCCTCGTGTTACATTAATTCGT 22103 Query 156182 GAAGATAAAACGTGGAAAGAATCTACTCATCTAAACGATTTAG 156224 | |||||| | ||||||||| | ||| | || | || |||| Sbjct 22104 TATGATAAATCATGGAAAGAAGCAACTACTTTAGAAGAATTAG 22146 >seq84422 Length=160705 Score = 125 bits (138), Expect = 9e-24 Identities = 113/142 (80%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 61918 CCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATT 61977 |||||| || ||||||||||| |||||||| ||| | || || || ||||| ||||| Sbjct 8654 CCATCCATAGAAATGCATACTTGTTAGTTTTCCATAGTTTGGTTCAGCAATATGAATATT 8713 Query 61978 CATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTT 62037 | || || |||||||| ||||| ||||| || |||||||||||||||||||| | || Sbjct 8714 TAACGACTGGCTTTGATCAATGAAAGCTCCTCTATCTGCAGCCATTTTTATAATGGATTT 8773 Query 62038 TTGTGGAATTTCCCAAATAGTT 62059 ||| | |||||||||| |||| Sbjct 8774 TTGAGATATTTCCCAAACAGTT 8795 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 62191 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62250 ||| |||||||||||||| || ||||| | ||||||||||| ||||| || || | Sbjct 9112 TACCTGAAATTCTCCAGATAAAACTCTTCTCACATAAATATTACTTGTATAAGGCTCTAT 9171 Query 62251 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62310 || |||||||| || | |||||| ||||| || ||||| ||||| || | | | || Sbjct 9172 TGATTCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTTGGCATTGGAGAAATAAGCAA 9231 Query 62311 ACTATTTCTAAGACCGTAT 62329 ||||||||| | ||| ||| Sbjct 9232 ACTATTTCTTATACCATAT 9250 >seq55348 Length=21870 Score = 98.7 bits (108), Expect = 1e-15 Identities = 126/172 (73%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 62432 TATGTATCGTATGGTCCT--TCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 62489 || || || |||||||| | ||| | |||| ||||||||| || ||||||||||| | Sbjct 9522 TAAGTTTCATATGGTCCAAATTCTTGT--GCTAATTCACAACTTGCTTCTAATGCACCAT 9465 Query 62490 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGAT 62549 ||||||| ||||| || || | | |||| | || ||||| |||||||| |||| Sbjct 9464 AATAAATAGTTTCAAAAATTTCAATGTTTAATTTCTGTGCTTCTTCACTATCAAAAGGAT 9405 Query 62550 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 62601 | | || |||||| | ||||||||||||||||||| || || || || Sbjct 9404 ACCTCAAAGAAATAAATGTATCTGCTAATCCTTGAACACTTATTCCTATCGG 9353 >seq89448 Length=33718 Score = 96.9 bits (106), Expect = 4e-15 Identities = 89/112 (79%), Gaps = 3/112 (3%) Strand=Plus/Minus Query 27527 ACCTGAGTTAATGATCTCCAATCCATATTAGCGCTTCCTAAATAAATATGTGTATTATCA 27586 ||||||||||||| | ||| ||||||||||| ||||| | ||||| ||| |||||| Sbjct 5355 ACCTGAGTTAATGCACGCCAGTCCATATTAGCACTTCCAATATAAAAATGCTGATTATCT 5296 Query 27587 GATATCCAAAATTTTGTATGAAGAACTCC---TCCTAGGATATTTGTAATAT 27635 |||||||||||||||||| |||||||| ||| || | ||||||| || Sbjct 5295 ATTATCCAAAATTTTGTATGGAGAACTCCACTTCCAAGAAGTTTTGTAAAAT 5244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632900091676800