Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_009382.1 Length=38760 Score E Sequences producing significant alignments: (Bits) Value seq71186 131 4e-26 >seq71186 Length=28966 Score = 131 bits (144), Expect = 4e-26 Identities = 733/1160 (63%), Gaps = 61/1160 (5%) Strand=Plus/Plus Query 4168 ATGGACATGAACGACGCGGCGAAGTCCGTCCAGCCGGCGTCGAACTCCAGCCTGCCCTTG 4227 || |||| ||||| ||| |||| || ||||| ||||| || | || | ||| |||| Sbjct 22672 ATCGACAGGAACGCCGCCGCGACCTCGGTCCAACCGGCATCCCATTCGA---TGCGCTTG 22728 Query 4228 CT---GATCACGTCGTGCGCCTTGAGCACCAGGGCGGTTTTCACGTCCACGGAATAGGTG 4284 | ||||||||| || ||||||||||||||||| | ||| | |||| | || ||| Sbjct 22729 CCCTGGATCACGTCCTGGGCCTTGAGCACCAGGGCATTCTTCGCCTCCAGGCTGTA-GTG 22787 Query 4285 AAGCCTTCGGCAT---CCGGACG--GAACTTCTGCACCAGGCGGAACACCGCATCGCCGA 4339 || |||| | |||| | ||| | | ||||||| ||||||| | | |||| Sbjct 22788 AA----TCGGAGTAGCCCGGGGGAAGAAGTCTTTCACCAGGTCGAACACCCCGTAACCGA 22843 Query 4340 TGCCGGTCCGGTCGATGCCCACGTAGGCGACGTCGTAGCGCTCAGCGACGC-GCCGGATG 4398 |||||| ||||||||| | || ||||| | ||||||| || || | ||| Sbjct 22844 CGCCGGTAATGTCGATGCCGATGTGCTGGACGTTGAAGCGCTC-GCACAGCTTCTCGATC 22902 Query 4399 GCGCCGGCCTGTTCCTCGTA-GTCGATGCCGCGGAACTGGTGCCGCTCCAGCACGCGGAA 4457 ||||| | | | | | || | || || | |||| |||||| | ||||| Sbjct 22903 TGCTTTGCCTGATGCGTGAACGACG-TCCCCCGCCAGCTGTGCTTCTCCAGGATTCGGAA 22961 Query 4458 CTTGCCGCCCGGTACCAGTGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 4517 |||||||||||| |||| |||| Sbjct 22962 CTTGCCGCCCGGCTCCAGGGGCGGGGCAACGACAACGCACGTCGCGTCGTCGCGGGTTCG 23021 Query 4518 NNNNTTGGGGTCGTAGCCGACCCACACCGGCCGGTTGCCGAACGGCCGTGGCGCGAACGG 4577 ||||||| || |||| ||| ||||| |||||| |||||||||| || | ||| Sbjct 23022 AC---TGGGGTCATACCCGAGCCAGACCGGGCGGTTGTCGAACGGCCGCGGGCTGTCCGG 23078 Query 4578 CCGGAAGTCTTCCCATACCTCCCAACTGTCCACCATCCCGCGCATGAGCATCG--CGAGC 4635 | |||| ||||| ||||| ||| | |||| || ||| | || Sbjct 23079 GTCGTAGTCAGTCCATA-GGCCCAA--GTCGGAATAGCAGCGCTCCAG-GTCGGTCAAG- 23133 Query 4636 GGAAACACCGACGCGTTGTCGTCGATGAATACGCACATGAGCAGGTTGGCGAAATCGAGT 4695 | || | | | | || ||||||||| |||||||| ||| | |||| | Sbjct 23134 GCGAATGCAGCCTGGGTGCTGTCGATGAACTTGCACATGAACAGCTGTTCGAAGCGCTCT 23193 Query 4696 TCGCTGTACTCCAGGCGCAGCTGGTCGAGGTCGAACAGGTTGCAGCCGCCGCGGAGCGCA 4755 ||| ||||||||| |||| | || |||||||||||||||||||||||| || || Sbjct 23194 TCGTCGTACTCCAGCTGCAGGCGCTCCAGGTCGAACAGGTTGCAGCCGCCGGCGATGGCG 23253 Query 4756 TCCTCCACCGTCACGATTTGGCGCCACTGGCCGTCCGCGCAGCGCATGCCGTCGCGAAGC 4815 || | | ||| | || | ||||||||| ||||||| ||| | |||| | | | | Sbjct 23254 TCTTGAATCGTGATGACCTTGCGCCACTGCCCGTCCGGGCACAACGCGCCGGCATGGATC 23313 Query 4816 GCGGCGTGGCTCAGGTCGA--GCTTGATCTGTTTGTCCTTGGCCTTGCCGCGGTTGAACA 4873 || | ||| || | | || | || | | ||| | ||||| | | |||| Sbjct 23314 TGCGCTTCGCT--GGGCCACGGCCCGGCCT-TCTTTCC--GCGCTTGCTGTTGCGGAACT 23368 Query 4874 GTGCGCCGGACCAGAACGGATAGGCCTCATGCG---ACAAGCTGGACGGCGTGGAGAAGT 4930 |||||| |||| ||||||| |||| |||| | |||| ||||||||||||| Sbjct 23369 CCTCGCCGGTCCAGTACGGATATGCCTGGTGCGTTACCGCGCTG---GGCGTGGAGAAGT 23425 Query 4931 AGGTCTGACGCCAGTGCTTG--TGGATCGCCATGCCGGAGGCGACCTTGCGCAGTTCCTG 4988 ||||| | ||||| | ||| || ||||| || ||| ||| | |||| | ||| Sbjct 23426 AGGTCAGGCGCCACT--TTGCATGCGAGGCCATCGCGCTGGCCACCGTCTGCAGCTTCTG 23483 Query 4989 GAAGCGCGGCACCCAGAAGTATTCATCGAAGTACAGGTTGCCGTGATACGACTGCGCGGT 5048 ||| || | |||||| ||| |||| ||| | || |||||| || |||||| || Sbjct 23484 GAAATTGGGGATCCAGAACACTTCGTCGATGTAGACGTGGCCGTGGTAGCTCTGCGCCGT 23543 Query 5049 GCGGGCGTTCGTGCCGAGAA-----AGT-------AGAGCGTGGCGCCGTTGGGCAGCAC 5096 | | |||||| ||||| ||| | || || || | ||| || | Sbjct 23544 GTTGCTGTTCGTCGAGAGAAACCGCAGTTCCGCCCACGGCTTGCCGTCTTTGCTCAAGAT 23603 Query 5097 CATCGGATCGCCCTTCAGCTCGATCCCGGCCGCGTCCTTGGCGAACTGGATGATGTA-TT 5155 || |||| ||| ||||||||| || | | | ||||||| || |||||| | Sbjct 23604 GATGGGATTGCCGGACAGCTCGATATCGAACCATTGCGCGGCGAACGCGACGATGTAGCT 23663 Query 5156 GCTTGAAGACGTGCGCCTGCGCCTTGCTGGCCGATAGGAAAATCTGGTTGCGGCCGGTGG 5215 || ||| || | | ||| || ||| || || ||||||||||||||| ||||| Sbjct 23664 GC-GGAACACTTCGGACTGGGCGCGGCTCGCGGACAGGAAAATCTGGTTGTCCCCGGTCA 23722 Query 5216 TCAGCGCGTCGATGAACGCCTCGCGTGCGAAGTACCACGTCGCGCCGATCTGCCGGCTCT 5275 || ||||| |||||||| ||| |||||||| | ||| |||||||| || || Sbjct 23723 GCACTGCGTCCATGAACGCTTCGGCGGCGAAGTAGTAGGTCAGCCCGATCTGGCGCGACT 23782 Query 5276 TGAGCAGGTTGCGGATGCGC 5295 | || | | |||||| ||| Sbjct 23783 TCAGGATATGGCGGATCCGC 23802 Score = 84.2 bits (92), Expect = 5e-12 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 7615 CCTGCCGGCCATCCGCGTGCCGTACTTCCCGGCGAATGGCCTGCTGGTGACGCGCCTGGA 7674 ||||||| || ||| ||||||| |||||||| || || | |||| ||| || ||| Sbjct 26133 CCTGCCGTCCTTCCTGGTGCCGTTCTTCCCGGTCAAGGGAATCATGGTCACGAGCTGGGA 26192 Query 7675 CAACCTGTCCATTTACTACCAGGAGGGCGGGCGCCGTCGCACGATCCTGGACAACGCGAA 7734 ||||||||| || |||| |||||| | | | || ||| | ||||| ||| | || Sbjct 26193 CAACCTGTCGATCTACTTCCAGGACACCAGTTGGCGGCGCCATCTTCTGGAGAACCCCAA 26252 Query 7735 GCGCGATCGCATCGAAAACTACGAGTCGAGCAACGACGCGTACGTGATCGA 7785 |||| ||| |||| ||||| | | |||| || | ||||||||||| Sbjct 26253 GCGCTCCCGCGTCGAGGACTACAACGGGCGCAATGAAGGTTACGTGATCGA 26303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123774427542112