Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_009542.2 Length=33985 Score E Sequences producing significant alignments: (Bits) Value seq71186 224 2e-54 seq71187 163 6e-36 seq38867 129 1e-25 seq92223 104 5e-18 >seq71186 Length=28966 Score = 224 bits (248), Expect = 2e-54 Identities = 649/983 (66%), Gaps = 57/983 (6%) Strand=Plus/Plus Query 13419 CTCTATCTCCTGCGCCTGATACTGGAAGTTCAACCCGCGCCAGTAGTGCTTTTCCAGCAC 13478 ||| |||| || ||||||| | ||| | ||| |||||| |||||| ||||| | Sbjct 22896 CTCGATCTGCTTTGCCTGATGCGTGAACGACGTCCCCCGCCAGCTGTGCTTCTCCAGGAT 22955 Query 13479 TCGGAAGCGCTCGCCGGCAACCGTGGGCGGGGCGACCACCACCAGGGTGGCATTGTCGCG 13538 |||||| |||| | || ||||||||| || || || || || | |||||| Sbjct 22956 TCGGAACTTGCCGCCCGGCTCCAGGGGCGGGGCAACGACAACGCACGTCGCGTCGTCGCG 23015 Query 13539 GGTGCGGCTCGGGTCATAACCCATCCACACCTCGCGCCGCCCGAACGGGTCAGGAC-GCC 13597 ||| || || |||||||| || | ||| ||| ||| ||||||| || | | | Sbjct 23016 GGTTCGACTGGGGTCATACCCGAGCCAGACCGGGCGGTTGTCGAACGGCCGCGGGCTGTC 23075 Query 13598 CGGGCTTGTAGTCCTCCCATCGGGTGGGGTCC--ACCCCTGCCCGCTCCATGTCCTGGAA 13655 |||| | |||||| |||| || ||| | | || |||||| ||| || Sbjct 23076 CGGG-TCGTAGTCAGTCCATAGGCCCAAGTCGGAATAGCAGC--GCTCCAGGTCGGTCAA 23132 Query 13656 CTTGAACACAGACAGGGCATCGTCGATAAAGCGGCACATGTAGAGGCGGTCGAACACCTC 13715 ||| ||| | ||| |||||| || ||||||| | || | ||||| ||| Sbjct 23133 GGCGAATGCAGCCTGGGTGCTGTCGATGAACTTGCACATGAACAGCTGTTCGAAGCGCTC 23192 Query 13716 CTCCGGGTACTCGTCCTTGAGCTCCTCGATGTCGATGAGGTGGCAACCGA-GGCGAATGG 13774 || |||||| || || ||| | ||||| |||| ||| ||| ||||| ||| Sbjct 23193 TTCGTCGTACTCCAGCTGCAGGCGCTCCAGGTCGAACAGGTTGCAGCCGCCGGCGA-TGG 23251 Query 13775 CGTCCTCGATGGTGATGACGTAGCGCCACTGCCTGTCAGGGCAGATGCGGCCGCCGTCGC 13834 |||| | || |||||||| | ||||||||||| ||| ||||| | || ||||| || Sbjct 23252 CGTCTTGAATCGTGATGACCTTGCGCCACTGCCCGTCCGGGCACAA-CG--CGCCG--GC 23306 Query 13835 GTAGGTCATCTTCACCAGGGAAGTCGATGGCCACCCGGCTCGGCCG-CTGTCC---CTTC 13890 | | |||| | | ||| ||| | | |||| ||||| || ||| ||| Sbjct 23307 ATGG---ATCTGCGCT-------TCGCTGGGC-CACGGCCCGGCCTTCTTTCCGCGCTTG 23355 Query 13891 CAGC----GA-----TCCCCGGTCCAGAACCGGTACGCCTCGTGC---ACCTTGCTCGAC 13938 | | || || ||||||||| || | || |||| |||| ||| ||| | | Sbjct 23356 CTGTTGCGGAACTCCTCGCCGGTCCAGTACGGATATGCCTGGTGCGTTACCGCGCTGGGC 23415 Query 13939 GGGGTCGAGAAGTAGGTCTTGCGCCAGTGGCTCTGGGTCGCCATGGCACTGGCCACA-TC 13997 | || ||||||||||| |||||| | || | ||||| || |||||||| || Sbjct 23416 GTGG---AGAAGTAGGTCAGGCGCCACTTTGCATGCGAGGCCATCGCGCTGGCCACCGTC 23472 Query 13998 AGACAGCTTCTCGAAGTTGGGGATCCAGAAGTATTCGTCGATGTAGACGTTGCCGGAGCG 14057 | |||||||| ||| |||||||||||||| ||||||||||||||||| |||| | Sbjct 23473 TG-CAGCTTCTGGAAATTGGGGATCCAGAACACTTCGTCGATGTAGACGTGGCCGTGGTA 23531 Query 14058 GGACTGGGCACTGTTGGAGTTGGTGGAGCAGAAGTGCAGCTCGGCCC------------C 14105 | ||| || ||||| ||| || ||| || |||| || |||| | Sbjct 23532 GCTCTGCGCCGTGTTGCTGTTCGTCGAGAGAAACCGCAGTTCCGCCCACGGCTTGCCGTC 23591 Query 14106 GTTCGACAGCACGATGGGGTTGCCGGTCAGGGTGACGCCGAGGAAGGTCTGGGCGATCTT 14165 || || | |||||| ||||||| ||| || ||| | | ||||| | Sbjct 23592 TTTGCTCAAGATGATGGGATTGCCGGACAGCTCGATATCGAACCATTGCGCGGCGAACGC 23651 Query 14166 GCAGATATAGGAGCGGAACACCTCCGCCTGGGCGCGGGTGGCGGACAGGAAAATCTGGTT 14225 | ||| ||| ||||||||| || | |||||||||| | |||||||||||||||||||| Sbjct 23652 GACGATGTAGCTGCGGAACACTTCGGACTGGGCGCGGCTCGCGGACAGGAAAATCTGGTT 23711 Query 14226 GCCACCCGTCAGAATGGCATCCTCCAACGCCTCGCCGGCGAAATAGTAAGTCATCCCGAT 14285 | | || ||||| | || ||| ||||| ||| ||||||| ||||| |||| |||||| Sbjct 23712 GTCCCCGGTCAGCACTGCGTCCATGAACGCTTCGGCGGCGAAGTAGTAGGTCAGCCCGAT 23771 Query 14286 CTGACGGGACTTGAGAATGTTACGGGTGCGCGGCAGCGCCGGGTCGTTCTTGGCCTCCCG 14345 ||| || ||||| || || | ||| | |||| | ||| | ||||| ||| | Sbjct 23772 CTGGCGCGACTTCAGGATATGGCGGATCCGCGCCGTAAGCGGATTCTTCTTCGCCGCGAA 23831 Query 14346 CACACGCAACTGATAGCCGAACA 14368 || || ||| |||||||||| Sbjct 23832 CAGTTCCAGCTGGTAGCCGAACA 23854 Score = 122 bits (134), Expect = 2e-23 Identities = 115/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 675 CACCGCATCTTCCAGGTGGTCGGGGGCGAAGTGGGCATAGCGCATCGTCATCTTGATGTC 734 |||| |||| |||||||| ||||| ||||||||| || | |||||| | | Sbjct 11671 CACCACATCAGCCAGGTGGCCGGGGCTGAAGTGGGCGTATTTCTGCGTCATGGCCAGGGT 11730 Query 735 GGTGTGGCCGAGGATGCGCTGTAGCACCAGGATGTTGCCGCCGTTCATCATGAAGTGACT 794 || |||||| | || ||| ||||| |||||||| |||||||||||||||| |||| || Sbjct 11731 GGAGTGGCCCAAGACGCGTTGTAGGGTCAGGATGTCGCCGCCGTTCATCATGTAGTGGCT 11790 Query 795 GGCGAAGGTATGGCGCAGAACGTGGGT 821 ||||||||| |||||||| |||||||| Sbjct 11791 GGCGAAGGTGTGGCGCAGGACGTGGGT 11817 Score = 84.2 bits (92), Expect = 5e-12 Identities = 159/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 11544 GGGATGTTCACGAACATCGAGCGGAAGTTCCCTACCCCTTTGGAGTT--CGCGATCATCT 11601 |||||||| |||||||| ||||||||||| || || || || | || ||| ||| || Sbjct 21786 GGGATGTTGACGAACATAGAGCGGAAGTTACCGACTCCCTT--ACTTGCCGCAATCTGCT 21843 Query 11602 CCTTCATCTCCTCTTCGGTGTCGTCGTCCATGTTGGGGTCGGTCGCGTAGAAGATGAACC 11661 |||| | |||||| || || || || |||| ||| ||||| | | | Sbjct 21844 GTTTCAGATTCTCTTCATCTTCTTCCGACAAATTCTCGTCGTTCGTATAGAACACATATC 21903 Query 11662 CCATGTGGGCGCCGTTGAGGAAGTAGCGGCGTCGGAACAGGGTGGCGTCCTGGTTGAGCA 11721 | ||||||||||| | ||||||| || || ||||| || || | | ||| | || Sbjct 21904 CGGCATGGGCGCCGTTACTGTAGTAGCGCCGGCGAAACAGTGTCGCCGCTTCGTTCAACA 21963 Query 11722 GCGCAGACTGCAGGCCGCCAAGGTAATCGGGCATGCCATAGACCTGCTGCTC 11773 || ||||| || ||||| | ||| ||||| || || |||| | |||||| Sbjct 21964 GCAGCGACTGGAGCCCGCCCAAGTAGTCGGGTATCCCGTAGATGTTCTGCTC 22015 >seq71187 Length=23027 Score = 163 bits (180), Expect = 6e-36 Identities = 311/454 (69%), Gaps = 8/454 (2%) Strand=Plus/Plus Query 24513 GCCACCGAGATTGTCCGCTCCTCCTACGACATCCAGTCCGCCATCGCCGGGCTGGAGGGC 24572 ||||||| |||||||||| ||||| | || | ||| || ||||||| |||| Sbjct 1033 GCCACCGCCTTTGTCCGCTCGGCCTACCAGGTCGAAGGCGCGATAAAGGGGCTGGTGGGC 1092 Query 24573 AACGAGCTGCCCGCCTTCACCCGCGCCTCGACCGTCCTGGCCAAGGCCACCAAGGCCGAC 24632 ||||||||| | || ||||| ||| || | ||| ||||||||||||||| |||||| Sbjct 1093 AACGAGCTGGCAGCGATCACCAACGCGTCCAACGTGCTGGCCAAGGCCACCCGCGCCGAC 1152 Query 24633 ACCGCCACCATCACCAACTACATGGGCACCATGTACGGCATCTTCGAGCAGCAGGCCAAG 24692 ||| ||| || || | |||||| |||||||||||||| | ||| || |||||| | Sbjct 1153 GCCGACACGATGACAACCTACATCGGCACCATGTACGGGCTGTTCCAGGGCCAGGCCGAT 1212 Query 24693 AGAATGGGCAAGGCCAACTGGGTGGAAGATGTGGCGGGCAAGACGGCGCTGGCGGTACAG 24752 |||||| ||| || ||||| || | || | || |||| || | || || ||| Sbjct 1213 GCGATGGGCCGGGCAAAGTGGGTCGAGCAACTGACCGGGCAGACCGCCCGCGCCGTCCAG 1272 Query 24753 CTGTTCAAGACCACCGGCCAGGGCATGGCCGATGCCTTCGGGGCCATCGGTGCCAACGCC 24812 |||||| || ||||| | ||| ||| || ||| ||| | ||| | || Sbjct 1273 CTGTTCCGCACGTCCGGCGAACAGATGAACGAGGCGTTCAAGGCTACCGGCATCGGTGCA 1332 Query 24813 ACGGCGGCCGGGGTGTCGATGGATGAACAGTTCGCCGTGCTGGGCCAACTGCAGGC-CAC 24871 |||| ||||| | || ||| |||||| | || || || ||||| || || | || Sbjct 1333 TCGGCCGCCGGCGCCTCCCTGGTCGAACAGATGGCGGTCCTCGGCCAGTTG-AGCCAGAC 1391 Query 24872 CATGGGCGGCGGCGAGGC---CGGGACCAAGTTCAAGGCGTTCCTGGCCGGGGTGGGCAG 24928 ||||| ||||||||||| |||| | | ||| |||||| | | || || Sbjct 1392 CATGGAGGGCGGCGAGGCAGGCGGGCTC---TACAAAGCGTTCTTCGAAAACGTCAGCGC 1448 Query 24929 TGCCCAGAAGGCGCTCGGCATGAAGTTCACCGAC 24962 |||||| | ||| |||||||||||||||||| Sbjct 1449 CGCCCAGGACAAGCTGGGCATGAAGTTCACCGAC 1482 Score = 111 bits (122), Expect = 3e-20 Identities = 229/341 (67%), Gaps = 0/341 (0%) Strand=Plus/Plus Query 27080 GCCTGCGCATCCAGAACCAGTTTTCGGCGGTGGGGCGCTACCACATCGACGCGATTTACC 27139 || ||||| | | |||||||| || || || | ||||||| ||||||| | || | Sbjct 4020 GCTTGCGCGTGCGTAACCAGTTCTCCGCCGTCAACCAGTACCACACCGACGCGGTGTATC 4079 Query 27140 GCTCCATGCTGGCGAGCGTCGCGGGGATCCGCGCCGATCACATCTTCTTCGAGCACGACG 27199 || ||||| | || || | ||| | ||| | ||| | | | ||||||||||| || Sbjct 4080 GCGCCATGATCGCCGGCTTTCAGGGCGTGCGCCCGGATGGCGTGTACTTCGAGCACGGCG 4139 Query 27200 CCCCGCGGGGGCCCGGCACCGCCAACGCTTACATCCTGCTGGAGGTGGGGGCCACCCCGG 27259 | ||||| ||||| ||| | ||||| || | | | ||| | || | || | | ||| Sbjct 4140 CACCGCGTGGGCCAGGCTCGGCCAATGCCTTCGTGCTGTTCGATGCCGGCGTGCCGGCGG 4199 Query 27260 CCAGCCTCATCAATCAGCTCAACGACTACGTGGGGCGCCAGGGCAACCATGGCCATGGGG 27319 | | | | ||| |||||| |||| | | | |||||||||| ||||| || | Sbjct 4200 ACGAGTACCTGGAGCAGATCAACGCCTACATCCGCGACGAGGGCAACCACGGCCACGGCG 4259 Query 27320 ATGATCTGTTCGTGATGAGCATCCCCGAGACCCAGCACAGCCTCACCCTGGCGCTCTGGC 27379 | || ||| ||| | ||| ||||| || | ||||| || | | | | |||||| Sbjct 4260 ACGACCTGCAGGTGTTCGTCATGCCCGAAACACTGCACAAGGTCCGCGTCGAGATCTGGC 4319 Query 27380 CCCAGGCCAACCTCAGCGACGAGCAGCGGGCTGCGCTCAAA 27420 ||| ||| ||||||| || ||| ||||| || | ||| ||| Sbjct 4320 CCCGGGCAAACCTCACCGCCGACCAGCGCGCAGAGCTGAAA 4360 Score = 80.6 bits (88), Expect = 6e-11 Identities = 95/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 26330 ATTGAGCTGCTGGTTGAAGACGACGAGCGGCTGGTGCCTGGCACCATCTTCATCAGCGAA 26389 || |||||||||||||||| |||||||| |||||||| |||||| | || | |||| Sbjct 3291 ATGGAGCTGCTGGTTGAAGCGGACGAGCGCCTGGTGCCCGGCACCGTGCGGATTATCGAA 3350 Query 26390 GAGGCCCCCGACCGGGTGCTGGTCACCGCCCGCACCTATGAATTCGGCGAACTGGAGGTA 26449 || | | | || |||||||| ||| ||| |||||||||| | | |||||| Sbjct 3351 GAAGGGTCGGGGCGCTACCTGGTCACGGCCACCACTGTGGAATTCGGCGCAATCGAGGTA 3410 Query 26450 ACCCTGTGA 26458 || |||||| Sbjct 3411 ACGCTGTGA 3419 >seq38867 Length=17110 Score = 129 bits (142), Expect = 1e-25 Identities = 255/375 (68%), Gaps = 2/375 (1%) Strand=Plus/Minus Query 20694 CCATGGTCCACGTCGAAAAGGCCAGCCTCTCCATCACCGACAACAGCGCCGTGGCGCAAA 20753 || |||| |||||||| || |||| ||| |||||||||||||||||||| || || | Sbjct 15553 CCCTGGTTCACGTCGAGAAAGCCACCCTGGATATCACCGACAACAGCGCCGTTGCACAGA 15494 Query 20754 CCCGGGGGATCCCGGACGGCTTCGTCGATGGCGATGTCGCCGCCGAGCTG-GAGTTCGAG 20812 || | || |||||||||| || || ||||| || ||||| ||| | || | ||| Sbjct 15493 CCGGCGGCGTCCCGGACGGGCATGTGGACGGCGACGTGACCGCC-AGCGGCGAACTGGAG 15435 Query 20813 CTCGACACCAAGAATTTCTCGCAGTTGGCAGATGCCGCCAAACGCGCGGGGAGCTGGCGC 20872 || |||| | ||| ||| | | | || || || || ||||| || |||| ||| Sbjct 15434 CTGGACAGCGCGAACTTCGCCCTGGTGATGGAAGCGGCACGCCGCGCCGGCAGCTTTCGC 15375 Query 20873 GGAATGGAGCCGGACGATGTGCTGTTCTACGCCGACACCGGCACCGAGACCATGAAGGTG 20932 || || |||| || ||||||| |||| | | || ||| || || Sbjct 15374 AAGATCGATCCGGTGGACTGCCTGTTCTTCGCCAAGGCTGGTGTCGATGAAATCCGCGTA 15315 Query 20933 GAGGCCTTCGGGGTGAAGCTGCTGGTCTCCGACCTGCTCGACATCGACCCCAAGGGCGGC 20992 |||||||| || ||||| ||||||| |||||| ||||| || || ||||||||| Sbjct 15314 GAGGCCTTTGGCTGCAAGCTCAAGGTCTCCAGCCTGCTGGACATTGATCCGAAGGGCGGC 15255 Query 20993 AGCAAGACCGTGCACAAGGTGAAAGGCTTTGTGACCTCCCCCGACTTCGTTCACCTCAAC 21052 |||||||| || ||| | | || ||| || |||||| | | | ||||| Sbjct 15254 GCGAAGACCGTCCATAAGATCCCGTTCGACGTCACCAGTCCGGACTTCATCCGCATCAAC 15195 Query 21053 GGCGTGCCTTACCTC 21067 |||||||| |||||| Sbjct 15194 GGCGTGCCCTACCTC 15180 >seq92223 Length=1022 Score = 104 bits (114), Expect = 5e-18 Identities = 102/130 (78%), Gaps = 9/130 (7%) Strand=Plus/Minus Query 706 TGGGCATAGCGCATCGTCATCTTGATGTCG--GTGTGGCCGAGGATGCGCTGTAGCACCA 763 || ||||| ||||||||||| |||| || | ||| || |||||| ||||||| || Sbjct 648 TGCGCATATCGCATCGTCAT--TGATAACGAGGCGTGCCCCAGGATGTGCTGTAGGGTCA 591 Query 764 GGATGTTGCCGCCGTTCATCATGAAGTGACTGGCGAAGGTATGGCGCAGAACGTGGGTGC 823 ||||| || |||||||| ||||||||||||||||| || |||||||| |||||| Sbjct 590 CGATGTGCCCCCCGTTCATGATGAAGTGACTGGCGAACGTGTGGCGCAGTACGTGG---- 535 Query 824 TCTGGCCTGC 833 ||||||||| Sbjct 534 -CTGGCCTGC 526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 108511194973712