Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq54643 100 6e-16 seq507 100 6e-16 >seq54643 Length=28400 Score = 100 bits (110), Expect = 6e-16 Identities = 305/467 (65%), Gaps = 6/467 (1%) Strand=Plus/Plus Query 297242 ACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATTCCACTC 297301 || || ||| | |||||||| |||| || || || |||||| || || || || Sbjct 17559 ACAATTTCTCTAGGATTGTAGTTAGGAATTTTTGTACTCCAACCTGTTCCAATGCCTTCA 17618 Query 297302 GAACCATTCACCAGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGATCTTGTCA 297361 | |||||| |||| | | ||||||| || | |||||| || ||||| || | | Sbjct 17619 GTACCATTTACCAACACCATTGGAATAATGGGAATATAATATTCGGGTTCAATGCGCTGA 17678 Query 297362 CCGTCATCATACAGATATTTCAGAAGATTATCGTCCGTATCGACGAAA--ACCTGTCGAG 297419 ||||||||||| ||| |||||| ||| || || | |||| | ||| | Sbjct 17679 TTGTCATCATACATATAAACAAGAAGAGGATCATC--TAATGTGGAAAATATGTGTTTTG 17736 Query 297420 TCTGAGGGTTCAGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCA 297479 | |||| |||| ||||||||||||| || | || || |||||| || || |||| Sbjct 17737 TTAAAGGGCTCAGCATTGTGAAAATATAACGAGGGCTTGCTGCATCCTTCCCTCCTTGCA 17796 Query 297480 ATCTCGAACCGAACTGGCCCTCCGGCAACAACCAG-TTGATGTTATTGCTTCCGACATAA 297538 ||| | || || || || ||| || || |||||||| |||||||| ||| || Sbjct 17797 ATCGTGTGCCAAATTGTCCAATTGGC-TGAAGAAGATTGATGTTGTTGCTTCCAACAAAA 17855 Query 297539 TCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTA 297598 | ||||| | || | || || || |||| ||| ||||| ||||| || | Sbjct 17856 TTTTGTGCCAAATTAATTATTGTTCCCATAAGAGCATTTTCACCATGATGATAAGCAGAA 17915 Query 297599 TGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTG 297658 || || || || |||| || |||||||| || | || | | || || || Sbjct 17916 TGTTCCGCCACAGAACCAGCCAATTGTGCAACTTTTATCTCTCTTTTATCGTTTCGTTTC 17975 Query 297659 AAAGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAAC 297705 ||| | ||| || ||||| || ||| ||||| | ||||||||| Sbjct 17976 AAACAAGTATAAATTACTTTACGCTGACCTGGTTTAAGACCATCAAC 18022 Score = 100 bits (110), Expect = 6e-16 Identities = 305/467 (65%), Gaps = 6/467 (1%) Strand=Plus/Minus Query 297242 ACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATTCCACTC 297301 || || ||| | |||||||| |||| || || || |||||| || || || || Sbjct 23420 ACAATTTCTCTAGGATTGTAGTTAGGAATTTTTGTACTCCAACCTGTTCCAATGCCTTCA 23361 Query 297302 GAACCATTCACCAGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGATCTTGTCA 297361 | |||||| |||| | | ||||||| || | |||||| || ||||| || | | Sbjct 23360 GTACCATTTACCAACACCATTGGAATAATGGGAATATAATATTCGGGTTCAATGCGCTGA 23301 Query 297362 CCGTCATCATACAGATATTTCAGAAGATTATCGTCCGTATCGACGAAA--ACCTGTCGAG 297419 ||||||||||| ||| |||||| ||| || || | |||| | ||| | Sbjct 23300 TTGTCATCATACATATAAACAAGAAGAGGATCATC--TAATGTGGAAAATATGTGTTTTG 23243 Query 297420 TCTGAGGGTTCAGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCA 297479 | |||| |||| ||||||||||||| || | || || |||||| || || |||| Sbjct 23242 TTAAAGGGCTCAGCATTGTGAAAATATAACGAGGGCTTGCTGCATCCTTCCCTCCTTGCA 23183 Query 297480 ATCTCGAACCGAACTGGCCCTCCGGCAACAACCAG-TTGATGTTATTGCTTCCGACATAA 297538 ||| | || || || || ||| || || |||||||| |||||||| ||| || Sbjct 23182 ATCGTGTGCCAAATTGTCCAATTGGC-TGAAGAAGATTGATGTTGTTGCTTCCAACAAAA 23124 Query 297539 TCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTA 297598 | ||||| | || | || || || |||| ||| ||||| ||||| || | Sbjct 23123 TTTTGTGCCAAATTAATTATTGTTCCCATAAGAGCATTTTCACCATGATGATAAGCAGAA 23064 Query 297599 TGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTG 297658 || || || || |||| || |||||||| || | || | | || || || Sbjct 23063 TGTTCCGCCACAGAACCAGCCAATTGTGCAACTTTTATCTCTCTTTTATCGTTTCGTTTC 23004 Query 297659 AAAGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAAC 297705 ||| | ||| || ||||| || ||| ||||| | ||||||||| Sbjct 23003 AAACAAGTATAAATTACTTTACGCTGACCTGGTTTAAGACCATCAAC 22957 >seq507 Length=1999 Score = 100 bits (110), Expect = 6e-16 Identities = 305/467 (65%), Gaps = 6/467 (1%) Strand=Plus/Plus Query 297242 ACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATTCCACTC 297301 || || ||| | |||||||| |||| || || || |||||| || || || || Sbjct 1119 ACAATTTCTCTAGGATTGTAGTTAGGAATTTTTGTACTCCAACCTGTTCCAATGCCTTCA 1178 Query 297302 GAACCATTCACCAGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGATCTTGTCA 297361 | |||||| |||| | | ||||||| || | |||||| || ||||| || | | Sbjct 1179 GTACCATTTACCAACACCATTGGAATAATGGGAATATAATATTCGGGTTCAATGCGCTGA 1238 Query 297362 CCGTCATCATACAGATATTTCAGAAGATTATCGTCCGTATCGACGAAA--ACCTGTCGAG 297419 ||||||||||| ||| |||||| ||| || || | |||| | ||| | Sbjct 1239 TTGTCATCATACATATAAACAAGAAGAGGATCATC--TAATGTGGAAAATATGTGTTTTG 1296 Query 297420 TCTGAGGGTTCAGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCA 297479 | |||| |||| ||||||||||||| || | || || |||||| || || |||| Sbjct 1297 TTAAAGGGCTCAGCATTGTGAAAATATAACGAGGGCTTGCTGCATCCTTCCCTCCTTGCA 1356 Query 297480 ATCTCGAACCGAACTGGCCCTCCGGCAACAACCAG-TTGATGTTATTGCTTCCGACATAA 297538 ||| | || || || || ||| || || |||||||| |||||||| ||| || Sbjct 1357 ATCGTGTGCCAAATTGTCCAATTGGC-TGAAGAAGATTGATGTTGTTGCTTCCAACAAAA 1415 Query 297539 TCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTA 297598 | ||||| | || | || || || |||| ||| ||||| ||||| || | Sbjct 1416 TTTTGTGCCAAATTAATTATTGTTCCCATAAGAGCATTTTCACCATGATGATAAGCAGAA 1475 Query 297599 TGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTG 297658 || || || || |||| || |||||||| || | || | | || || || Sbjct 1476 TGTTCCGCCACAGAACCAGCCAATTGTGCAACTTTTATCTCTCTTTTATCGTTTCGTTTC 1535 Query 297659 AAAGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAAC 297705 ||| | ||| || ||||| || ||| ||||| | ||||||||| Sbjct 1536 AAACAAGTATAAATTACTTTACGCTGACCTGGTTTAAGACCATCAAC 1582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1101574214894800