Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq76947 116 4e-21 seq73005 113 5e-20 seq85547 87.8 2e-12 >seq76947 Length=48948 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||||||| ||||| || | ||| | || || || |||||||| || || || Sbjct 22809 CCTCCTCTTAAGCGCAATACTAAATGGAGAGTGGATTCTTTCTGGATATTATAATCTGAA 22868 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 |||||||| | || || || || || || || |||||||| | |||||| |||| || Sbjct 22869 AGAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAATATCAATCTCTGCTGATCGGGTGGA 22928 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || || || || |||||| ||| | || | | || || |||| ||| || Sbjct 22929 ATGCCTTCTTTATCTTGGATCTTTGCCTTCACATTCTCTATAGTATCACTCGGTTCTACT 22988 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| || |||||||| || || || ||||||||||| |||||||| Sbjct 22989 TCCAAAGTAATGGTTTTTCCTGTGAGTGTTTTAACAAATATTTGCAT 23035 Score = 98.7 bits (108), Expect = 1e-15 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 || ||||| ||| | ||| ||||||||| || |||||||| || || || || | || Sbjct 23507 CAGCACCAAATGAAGAGTAGACTCCTTTTGTATGTTGTAGTCTGAGAGTGTACGACCATC 23566 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 || |||||||| || || || ||||| |||||||| || | || | | ||||| || Sbjct 23567 TTCCAGCTGCTTTCCTGCAAAAATCAAACGCTGCTGATCTGGAGGAATACCTTCCTTATC 23626 Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGT 46560 |||||| ||| | | | | || || || | || || |||| |||||||| Sbjct 23627 TTGGATCTTTGCCTTCACATTTTCAATAGTATCACTGGGCTCTACTTCCAAAGTGATGGT 23686 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 ||| || || || || || |||||||| |||||| Sbjct 23687 TTTTCCAGTGAGTGTCTTCACAAAGATCTGCATT 23720 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || || || ||||||||||| || || || |||| || || || || ||||| || Sbjct 23073 TCTTTCTGAATGTTGTAGTCGGAGAGGGTACGACCGTCTTCCAGTTGTTTTCCGGCAAAG 23132 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCG-T 46521 |||||||||||||| |||| || | || || || || ||||| | ||| || | Sbjct 23133 ATCAAGCGCTGCTGATCGGGAGGTATGCCTTCTTTATCTTGTATCTT-TGCTTTTACGTT 23191 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || | ||| || |||| || || || || || || || ||||| || Sbjct 23192 TTCTATGGTGTCACTAGGTTCAACTTCCAGAGTTATAGTCTTCCCTGTGAGAGTTTTTAC 23251 Query 46582 AAAGATTTGCATT 46594 ||| || |||||| Sbjct 23252 AAAAATCTGCATT 23264 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||||||| | ||| |||||||| ||||| || || || |||||||| | || || Sbjct 23283 ACCAGATGAAGTGTTGATTCCTTTTGAATATTATAATCTGACAGAGTGCGACCATCTTCC 23342 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || ||||| || || || || | ||||| || || | || | | || ||||| Sbjct 23343 AGTTGCTTACCAGCAAAGATAAGTCGCTGTTGATCAGGTGGAATTCCTTCTTTGTCTTGA 23402 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 || || ||| | | | | ||||| || | |||||| |||| ||||| ||||| Sbjct 23403 ATTTTTGCCTTTACATTTTCAATTGTGTCACTTGGTTCCACTTCCAGAGTGATTGTTTTA 23462 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || |||||||||||||| Sbjct 23463 CCAGTGAGTGTCTTCACAAAGATTTGCAT 23491 Score = 82.4 bits (90), Expect = 9e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | || | ||| || || || | |||||| ||||| ||||||||||| || || Sbjct 23721 CCTCCACGCAATCTCAATACAAGGTGAAGTGTACTTTCCTTCTGGATATTGTAATCTGAA 23780 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || | || || | ||||| || || || || || | |||||| || | || Sbjct 23781 AGGGTACGTCCATCTTCTAATTGCTTTCCAGCAAAAATTAATCTCTGCTGATCAGGAGGA 23840 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | || || || ||| || || | || | | ||||| || | |||||| Sbjct 23841 ATTCCTTCTTTATCTTGGATTTTAGCTTTTACATTCTCAATGGTGTCACTTGGTTCCACT 23900 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || | ||||| ||||| || || || ||||| ||||| || ||||| || Sbjct 23901 TCTAAAGTGATAGTTTTTCCAGTAAGGGTTTTTACAAATATCTGCATGTT 23950 >seq73005 Length=127446 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| ||| ||||||||||||||||| || | ||||| | || || Sbjct 43922 ACAAGATGGAGTGTTGACTCTTTTTGGATATTGTAGTCAGACAAGGTGCGACCATCTTCC 43863 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | ||||||||| || || ||||| || ||||| || | || | | || ||||| | Sbjct 43862 AACTGCTTGCCAGCAAAGATCAATCGTTGCTGATCTGGAGGTATTCCTTCTTTGTCTTGG 43803 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 || || ||| | || | | ||||| || | ||| || |||| ||||| || ||| Sbjct 43802 ATTTTAGCCTTCACATTCTCAATAGTGTCACTGGGTTCTACTTCCAGGGTGATAGTCTTG 43743 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || ||||| ||||| ||||||||||||||| Sbjct 43742 CCTGTCAGTGTTTTGACAAAGATTTGCATT 43713 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456 || || |||||||| || |||||||| |||| ||||| | || || | ||||||||| Sbjct 43454 GTGCTTTCCTTTTGAATGTTGTAGTCAGATAATGTGCGGCCATCTTCCAACTGCTTGCCA 43395 Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516 || ||||||| |||||||| || | || | | || |||||| |||||| ||| Sbjct 43394 GCAAATATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGGATCTTTGCCTTT 43335 Query 46517 AGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTT 46576 | | | | || || || | || || |||| || ||||| ||||| |||| ||| Sbjct 43334 ACATTTTCAATGGTATCACTTGGCTCTACTTCCAGAGTAATGGTCTTGCCTGTCAAAGTT 43275 Query 46577 TTAACAAAGATTTGCATT 46594 |||||||| || |||||| Sbjct 43274 TTAACAAAAATCTGCATT 43257 >seq85547 Length=49496 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 46364 TTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCG 46423 || |||||||| | ||| | || | ||| || |||||||| ||||| ||||| || || Sbjct 24898 TTTCCTCCTCTGAGACGAAGTACTAAATGTAAGGTACTCTCTTTTTGAATATTATAATCC 24839 Query 46424 GATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCC 46483 || ||||| || | || || || || ||||| || || || | | ||| || || | Sbjct 24838 GAAAGAGTACGACCATCTTCCAGTTGTTTGCCAGCAAAGATGAGTCTCTGTTGATCAGGT 24779 Query 46484 GGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCC 46543 || | || ||||| || ||| || || | | | | || || || | |||| Sbjct 24778 GGAATGCCTTCCTTATCTTGGATTTTAGCTTTCACATTTTCAATGGTATCACTGGGTTCC 24719 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || |||| || || ||||| || || | ||||||||||| ||||||||| Sbjct 24718 ACTTCCAGAGTAATTGTTTTCCCTGTTAATGTTTTAACAAAAATTTGCATT 24668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564585493124160