Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_016565.1 Length=18168 Score E Sequences producing significant alignments: (Bits) Value seq88054 369 4e-98 >seq88054 Length=21660 Score = 369 bits (408), Expect = 4e-98 Identities = 713/1049 (68%), Gaps = 6/1049 (1%) Strand=Plus/Plus Query 16138 GTAATTAAAATTTTATTAAAGAATGGGCTAATGGCTTTAAATGAATAGTAATGAATCCAG 16197 |||||||||||||||||| | || || ||| |||||||| || || |||| |||| Sbjct 19962 GTAATTAAAATTTTATTATAAAAAGGTGAAATAGCTTTAAAACTGTAATAGTGAAGCCAG 20021 Query 16198 TGTGTGACTTCATCAAATTCACCATTATAGAATGGTTGTTTTAACATTCCTTTTGTGTAA 16257 | || | ||||| ||||| ||| | || |||| ||| |||||||| || || | Sbjct 20022 TAAGTTATTTCATTGAATTCTGGATTGTTAAACGGTTCTTTAAACATTCCCTTAGTACTA 20081 Query 16258 CGTTTATATTTAATTGAATTAATATCCAAAATAAAAGCGTATAAATCTGATTTTGGTTTA 16317 ||||| || || ||||||||| || ||||| || || | ||| |||||||||| Sbjct 20082 CGTTTGTAACGAAGCATATTAATATCAAATATAAACGCATAAAGATCACTTTTTGGTTTA 20141 Query 16318 ATTTCTTCAACACTATCTTTAAATTCAGATAGTTTTGATACATCATAAGTGAATACTGAA 16377 ||||| |||| || | ||||||||| || || ||| |||| | | || ||||| ||| Sbjct 20142 ATTTCAACAACTTTACCCTTAAATTCACTTAATTCTGAAACATTAAATGTAAATACGGAA 20201 Query 16378 CCAACTGGAATTGTATCACCTTTATGAGTTTGATAATCACCGTAAGCACGTAAGAAATTA 16437 | || || ||||| |||| || | |||||||||||| ||||| ||||| ||||| Sbjct 20202 TCTTTAGGTATAATATCATCTTTTTGTGATTGATAATCACCATAAGCCCGTAAATAATTA 20261 Query 16438 ACTGATTCATCACTTGATACGACAATATCTTTAGTGACTTTAAAAACACCGCCTAGGTCG 16497 | | |||| | | || |||||| | ||| |||| ||||||| || | Sbjct 20262 ATCGTATCATTAGTACTTAAAGTAATATCATCAGTTGTTTTATAAACACCACCCAAAGTA 20321 Query 16498 TCAAAACTGATAACGTGGTCTGTAAAGTCAATCCCTGCTACTTGGAATGTGTTCGCAATC 16557 ||||| |||| | | ||| || | || || |||| || || || ||| Sbjct 20322 TCAAACGAAATAATTCGATTCGTAGGATCTAAACCAGCAGCTTGAAAAGTATTACCAACA 20381 Query 16558 TTTGTATCTAAAAGATAAGATTTTAAGCTATCAGTTGTTAAAATAACAATATCTTTTAAT 16617 || | || || |||||||| | |||| ||||||| ||| |||||||| | Sbjct 20382 ACTGAGTTTACAAAGTAAGATTTATATTTATCCGTTGTTACTATACAAATATCTTCAATA 20441 Query 16618 TTTGAAACTGTTGTATATTGTCCGATAGCACCACCTGAAGCACGATGAACTTCATTATAT 16677 | || | || | ||| |||| || ||||| |||||||| || | |||| ||||| Sbjct 20442 TCTGTTAGAGTCGAATAACGTCCTATTGCACCTCCTGAAGCTTTATTAGCTTCGTTATAC 20501 Query 16678 TTAGCGCTGTTGTTTTGTAAGTTAAGAATAGCTTCAAAAACT-TTACTT--GCTAAATCT 16734 | || ||||| | ||| | ||| ||| ||| || || ||| |||| ||| Sbjct 20502 AATTCACTAGGATTTTGAATGTTGAAAATGGCT---AAAGCTATTTCTTCAGCTACGTCT 20558 Query 16735 TCTTTTGATGTTGCTTTACGTACATTTGATTCAGATAATTGATTCAATGAGTAATCAACT 16794 | || ||| | | | | |||||| ||| |||||| || || |||||| | | Sbjct 20559 TGTTCACTCGTTACAGTCCTTTTATTTGAATCATTTAATTGGTTTAAACTGTAATCGATT 20618 Query 16795 AACATTGCACGCATTTCTTTTTCTTCTAATACGTTAATATCAGAAATTTTCTTTTTATAG 16854 ||||| || |||||| ||||||| ||| ||||| || |||||| || || | Sbjct 20619 AACATAGCTTTTATTTCTCTTTCTTCAGATATATTAATGTCCGAAATTCGTTTATTTAAT 20678 Query 16855 ACACCTAATGCATAATTAGTAGCGTCTGCTAATGTTTGGAAATTGAAACGTGTGTCATTG 16914 || || | ||| | || |||| || |||| ||| |||||||| | | || || Sbjct 20679 ACCCCAAGTGCTGCACTAATAGCATCACCTAAAGTTAAAAAATTGAATCTTACATCGTTA 20738 Query 16915 TTATTTAATGTAAATTTTTGTTTCTTCACAATACCACTACCATATAACTTAGTAGCCATA 16974 | |||||| |||||||| || ||||| | || |||||||| || |||||| Sbjct 20739 TCATTTAACGTAAATTTCTGCTTCTTAAACTCGCCCGGCCCATATAAACGTGTTGCCATA 20798 Query 16975 CGTGGATAGTTACGTTTCAACATTAGTTCTTCATTTTTAGATAAGTCCATGTTAATAGGT 17034 || ||||| | | ||| ||||||| |||||| |||||||||| | ||| || ||| Sbjct 20799 CGAGGATAATGTCTTTTTAACATTAAATCTTCACTTTTAGATAAATTCATCCCAACAGGA 20858 Query 17035 ACTGTATCCATAATTACATATTCTTCACTGTATTGACCGATAAAGTCCTGCTCTTTAGCT 17094 || ||||| | | |||||||| ||| | |||| |||| | |||| ||||| Sbjct 20859 ACAGTATCTAAATAAACATATTCCTCAGTTAATTGTGAAATAACGGGAACCTCTCTAGCT 20918 Query 17095 AACCAATTAAAACGGTTACCTAATGCAATATCAATTAATAACGTTTCATTAATCTTAGGG 17154 |||||||||||||| ||||||| || |||||||||||| |||||| | || || ||| Sbjct 20919 AACCAATTAAAACGATTACCTACGGCTTGATCAATTAATAAAGTTTCACTTATTTTTGGG 20978 Query 17155 AATAAAAATTTATTTACAAATGTTTCAAA 17183 |||||||| || |||| | | || ||||| Sbjct 20979 AATAAAAACTTGTTTATATAAGTCTCAAA 21007 Score = 147 bits (162), Expect = 3e-31 Identities = 319/471 (68%), Gaps = 11/471 (2%) Strand=Plus/Plus Query 15174 CTTCATCGTCGTAATACGGTTTAATGTCTAAACCATAACGTTT-TGATAAGAATGTAATC 15232 |||||||||| ||||| || | ||||| |||| | ||||| | | || | || | Sbjct 19002 CTTCATCGTCATAATAAGGATAAATGTTTAAATTGAATCGTTTATTAAAACATTGAAGAG 19061 Query 15233 GGTTCA--CGACCTTTTAAATAAATATTACTATTAGATGTAGTAAAACCTCGGTTACTTT 15290 |||| | || ||||| | ||||| || | |||| ||| |||||| |||| ||||||| Sbjct 19062 GGTTTAAACGTCCTTTGATGTAAATGTTTCCATTATTTGTGGTAAAAGCTCGATTACTTT 19121 Query 15291 TTGCCTCTTCGTCCGAAACACCGCTTTCCTTATCCACTGCTAGTGAATTAATACCTAAAT 15350 |||| || | || |||||||||||| || || || || | ||| | ||||||| Sbjct 19122 TTGCTTCAACATCGGAAACACCGCTTGTTTTTTCTACAGCCAAACTATTTAAACCTAAAA 19181 Query 15351 AGTTACTTAATTCACTAATTTTATTTTGGTATTCTCTTTTCATCTCAGTTAGTGCTGGAA 15410 | || |||| |||| |||||| ||||| ||||| | ||| | ||||| ||| || Sbjct 19182 AATTGTTTAACTCACCAATTTTGTTTTGATATTCACGTTTTAATTCAGTAAGT----AAA 19237 Query 15411 TCA--CACTA-TTACTGGTTAAATCT-ATGATATCATCATCGGCGTTAAACATAGGTGAC 15466 | | ||| | | | | |||| | || | | ||| || | | ||| | | | | Sbjct 19238 TTAGCCACAACCGAGTTATCAAATGTAATTAACTGATCCTCTGGATCAAAAAGATGACTC 19297 Query 15467 ATTTTAACAAATGGTGCACCGTTGTATATTTCCGATACAAGTTGGTTAACTGATTCATCG 15526 ||| | ||| || | || || |||| || || |||||||| ||||||| |||||| Sbjct 19298 GCTTTTATAAAAGGAGACCCATTATATAAATCAGAAACAAGTTGATTAACTGTTTCATCA 19357 Query 15527 TTAATGTCTGATTTAAATATTTTGCTAAATTTTGCTTGCATAATTAATGAGAATCGAGAT 15586 || |||||| | || | | | ||||| |||||| | | ||| ||| ||| Sbjct 19358 CCTATTTCTGATCGTATAATGGTCATCATTTTTGACTGCATAGTCACTGAATATCTAGAA 19417 Query 15587 AAAACAACCTCAGATAATTCATCAGTATAATGTTCTATAATTTCTATATCA 15637 | || | |||| ||||||| || ||||||||| ||||||| || |||| Sbjct 19418 ACTACTATTTCAGCTAATTCAGCACAATAATGTTCAATAATTTGTAAATCA 19468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 57957208370424