Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq70742 93.3 5e-14 seq88728 91.5 2e-13 seq44486 84.2 3e-11 seq63740 82.4 1e-10 >seq70742 Length=70757 Score = 93.3 bits (102), Expect = 5e-14 Identities = 84/103 (82%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 168652 AAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTG 168711 |||| |||||||| ||| ||||||| ||||||||||||||| |||||| |||||| | Sbjct 67491 AAGGAGATTTAGGGCCAGTTTATGGTTTTCAATGGAGACATTTTGGAGCTGAATATAAT- 67433 Query 168712 ACTGTG-ATACAGATTACACCGGACAAGGAGTAGACCAATTAA 168753 || || |||||||||| | ||| ||||| |||| ||||||| Sbjct 67432 ACAATGCATACAGATTATTCTGGAAAAGGAATAGATCAATTAA 67390 >seq88728 Length=104465 Score = 91.5 bits (100), Expect = 2e-13 Identities = 125/171 (73%), Gaps = 4/171 (2%) Strand=Plus/Minus Query 193440 CGTATACCTGAAATAGGGGATAAATTTTGT--TCAGGAATGGCCCAAAAAGGAACTTGTG 193497 ||||| ||| |||| || || |||||| | || | | || | | ||||| ||||||| Sbjct 90238 CGTATTCCTCAAATTGGTGACAAATTTGCTAGTC-GTCACGGTC-AGAAAGGTACTTGTG 90181 Query 193498 GTATGATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTA 193557 | || | ||| ||||||||||||||||||||| || |||||| |||||||||| Sbjct 90180 GCATAACATATAGACAAGAAGATATGCCATTTACTGCAGAAGGTATAACTCCAGATATTA 90121 Query 193558 TTATTAATCCAAATTGTATTCCATCCAGAATGACCATTAATCAAATTATTG 193608 | || ||||| || |||||| || | ||||||||| ||| | |||| Sbjct 90120 TCATCAATCCTCATGCTATTCCTTCACGTATGACCATTGGTCACTTGATTG 90070 Score = 84.2 bits (92), Expect = 3e-11 Identities = 196/290 (68%), Gaps = 7/290 (2%) Strand=Plus/Minus Query 192831 ATACCATTTTCCGATAGAACACAATCTGCTCGAAACTGTTTTTATACTTCTATGGTTAAA 192890 || |||||| | ||| | || ||| |||| ||| | | | || |||||| |||| Sbjct 90886 ATTCCATTTCCTGATCATAATCAGTCTCCTCGTAACACATATCAGTCTGCTATGGGTAAA 90827 Query 192891 CAAGCCATTGGATTT---ATTCCGTGTCACAACTTAAAAACGGAAACAGTATCTCATACA 192947 ||||| || ||| || ||| | | | | | | || ||| ||| | ||||| Sbjct 90826 CAAGCTATGGGAGTTTATATTACTAATTTCCATGTGAGAATGGACACACTTGCTCATGTT 90767 Query 192948 TTAAATTATCCACAAAAACCCCTTGTTACCACA-GATAT-TGCAAAATTTAATAAATTAG 193005 ||| ||||||| || ||||| ||||| || ||| | | | || || ||||| | || Sbjct 90766 TTATATTATCCTCAGAAACCACTTGTGACAACACGTTCTATGGAATATTTACGTT-TCAG 90708 Query 193006 ACGATTATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATC 193065 | ||| || ||| || ||| ||||||||||||| | ||||| ||||| |||| Sbjct 90707 AGAATTG-CCTGCTGGCATCAATTCTATTGTTGCTATTATGTCATATACAGGTTACAATC 90649 Query 193066 AAGAAGACAGTATTATTTTAAATAAAGCTTCTATTGAAAGAGGATTATTT 193115 |||||||| ||||||| | ||| || | ||||| ||||| || ||| Sbjct 90648 AAGAAGACTCTATTATTATGAATGCCTCTGCAATTGATAGAGGGTTTTTT 90599 >seq44486 Length=28806 Score = 84.2 bits (92), Expect = 3e-11 Identities = 121/169 (72%), Gaps = 9/169 (5%) Strand=Plus/Plus Query 42789 AAAGTTATCAACAATCTGCAGGTTTTACACATTTACCTGACTTATGCTTTAAATAACCAG 42848 ||| |||| |||| ||| |||||||||| || |||| || ||| |||||| Sbjct 17130 AAATTTATTAACATTCTTCAGGTTTTACGCAGGATTCTGATTTTC---TTACATAACCTT 17186 Query 42849 GTTTACATTGACAACCAATAACACATTGCAAAGTACATGGTCTATTTGGATTTG---GAT 42905 || ||||| || || ||| ||||||||||| || ||| |||||| | ||| Sbjct 17187 TTTCGCATTGGCATCCTGGAACGCATTGCAAAGTGCAAGGTGG---TGGATTAGCATGAT 17243 Query 42906 TTTCACAAGTTAATGGACATGCTGTTCCACAAGTTGTATATTCTTGATT 42954 |||||||||||| |||||||| |||||||| | |||||||| ||| Sbjct 17244 TTTCACAAGTTAGGGGACATGCAGTTCCACATTCTTCATATTCTTCATT 17292 >seq63740 Length=48775 Score = 82.4 bits (90), Expect = 1e-10 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 23055 CATGGGGATGAATATAATTTTGATGGTCCAGGTCAAATTTTAGCTCATGCtttttttCCT 23114 ||||| |||| ||| ||||||||||| ||| | ||||| ||||||||||| ||| Sbjct 11033 CATGGTGATGGTTATCCTTTTGATGGTCATGGTTCTGTATTAGCACATGCTTTTTTCCCT 10974 Query 23115 GGTACTGGAAGAGGAGGAGATGCTCATTTTGATTTAGAAGAAAACTGG 23162 || |||| ||| || |||| |||||||||| ||||||||| ||| Sbjct 10973 GGAGAAGGAATAGGTGGTGATGTTCATTTTGATGCAGAAGAAAAATGG 10926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634443906354240