Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq70862 111 2e-19 seq54643 87.8 2e-12 seq507 87.8 2e-12 seq32811 84.2 2e-11 >seq70862 Length=68494 Score = 111 bits (122), Expect = 2e-19 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 84313 tttttCCTCCTTGATTACATAATTTAGTTGCGTTAAAATACCCAGTAACCTTATCTATGA 84372 |||||||||| | ||||||||||| ||||| |||||||| | ||| |||||||| | Sbjct 32372 TTTTTCCTCCATCTTTACATAATTTTGTTGCATTAAAATATCTTGTATTTTTATCTATTA 32313 Query 84373 CCAATTTAAACTCTCCAAAGAGACCATAATAAAAGGTGTCTTTAATGTGTTCAAAGCATA 84432 |||||||| ||| |||| | |||||||||| | | |||||||| |||||| | |||| Sbjct 32312 TTAATTTAAAATCTTCAAATAAACCATAATAATAATTATCTTTAATTTGTTCATAACATA 32253 Query 84433 TATC 84436 |||| Sbjct 32252 TATC 32249 >seq54643 Length=28400 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/202 (71%), Gaps = 7/202 (3%) Strand=Plus/Minus Query 146376 TAAAGGTGGCGCAATTAAGTGGGTGTGTGGCAGAGCAGACCGATTACAAGCACGGGGAGC 146435 |||| || || ||||| ||| | |||||| || || | | ||| | || || || Sbjct 17952 TAAAAGTTGCACAATTGGCTGGTTCTGTGGCGGAACATTCTGCTTATCATCATGGTGA-- 17895 Query 146436 AAAA---CTTGTGCGAGACCATCATTAAGTTCGCGCAGGATTTTGTGGGCAGCAATAATA 146492 ||| ||| || || || || ||||| || || || ||||||| || ||||| || | Sbjct 17894 AAATGCTCTTATGGGA-ACAATAATTAATTTGGCACAAAATTTTGTTGGAAGCAACAACA 17836 Query 146493 TCCCCCTTCTCTA-CCAGATGGGCAATTCGGAACAAGGTTGGAAGGAGGGAAGGACGCTG 146551 || ||||| | ||| ||| ||||| || ||| | ||| ||||||||||||| || | Sbjct 17835 TCAATCTTCTTCAGCCAATTGGACAATTTGGCACACGATTGCAAGGAGGGAAGGATGCAG 17776 Query 146552 CAAGTCCCAGATATATTTTCAC 146573 |||| || | ||||||||||| Sbjct 17775 CAAGCCCTCGTTATATTTTCAC 17754 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/202 (71%), Gaps = 7/202 (3%) Strand=Plus/Plus Query 146376 TAAAGGTGGCGCAATTAAGTGGGTGTGTGGCAGAGCAGACCGATTACAAGCACGGGGAGC 146435 |||| || || ||||| ||| | |||||| || || | | ||| | || || || Sbjct 23027 TAAAAGTTGCACAATTGGCTGGTTCTGTGGCGGAACATTCTGCTTATCATCATGGTGA-- 23084 Query 146436 AAAA---CTTGTGCGAGACCATCATTAAGTTCGCGCAGGATTTTGTGGGCAGCAATAATA 146492 ||| ||| || || || || ||||| || || || ||||||| || ||||| || | Sbjct 23085 AAATGCTCTTATGGGA-ACAATAATTAATTTGGCACAAAATTTTGTTGGAAGCAACAACA 23143 Query 146493 TCCCCCTTCTCTA-CCAGATGGGCAATTCGGAACAAGGTTGGAAGGAGGGAAGGACGCTG 146551 || ||||| | ||| ||| ||||| || ||| | ||| ||||||||||||| || | Sbjct 23144 TCAATCTTCTTCAGCCAATTGGACAATTTGGCACACGATTGCAAGGAGGGAAGGATGCAG 23203 Query 146552 CAAGTCCCAGATATATTTTCAC 146573 |||| || | ||||||||||| Sbjct 23204 CAAGCCCTCGTTATATTTTCAC 23225 >seq507 Length=1999 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/202 (71%), Gaps = 7/202 (3%) Strand=Plus/Minus Query 146376 TAAAGGTGGCGCAATTAAGTGGGTGTGTGGCAGAGCAGACCGATTACAAGCACGGGGAGC 146435 |||| || || ||||| ||| | |||||| || || | | ||| | || || || Sbjct 1512 TAAAAGTTGCACAATTGGCTGGTTCTGTGGCGGAACATTCTGCTTATCATCATGGTGA-- 1455 Query 146436 AAAA---CTTGTGCGAGACCATCATTAAGTTCGCGCAGGATTTTGTGGGCAGCAATAATA 146492 ||| ||| || || || || ||||| || || || ||||||| || ||||| || | Sbjct 1454 AAATGCTCTTATGGGA-ACAATAATTAATTTGGCACAAAATTTTGTTGGAAGCAACAACA 1396 Query 146493 TCCCCCTTCTCTA-CCAGATGGGCAATTCGGAACAAGGTTGGAAGGAGGGAAGGACGCTG 146551 || ||||| | ||| ||| ||||| || ||| | ||| ||||||||||||| || | Sbjct 1395 TCAATCTTCTTCAGCCAATTGGACAATTTGGCACACGATTGCAAGGAGGGAAGGATGCAG 1336 Query 146552 CAAGTCCCAGATATATTTTCAC 146573 |||| || | ||||||||||| Sbjct 1335 CAAGCCCTCGTTATATTTTCAC 1314 >seq32811 Length=28753 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 84318 CCTCCTTGATTACATAATTTAGTTGCGTTAAAATACCCAGTAACCTTATCTATGACCAAT 84377 ||||| | ||||||||||| ||||| |||||||| || ||| |||||||| | ||| Sbjct 5110 CCTCCATCTTTACATAATTTTGTTGCATTAAAATATCCTGTATTTTTATCTATTATTAAT 5051 Query 84378 TTAAACTCTCCAAAGAGACCATAATA 84403 ||||| |||||||| | ||||||||| Sbjct 5050 TTAAAATCTCCAAATAAACCATAATA 5025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520943162677440