Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq70862 118 1e-21 seq44439 111 2e-19 seq69487 96.9 5e-15 >seq70862 Length=68494 Score = 118 bits (130), Expect = 1e-21 Identities = 113/145 (78%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 61057 ACCAATTCGTAAAtttttttCCTCCATAATTGCAGAGTTTGGTTGCATTAAAACAACCTG 61116 |||| || ||||| |||||||||||| || || | ||| |||||||||||| | | || Sbjct 32387 ACCATTTTTTAAATCTTTTTCCTCCATCTTTACATAATTTTGTTGCATTAAAATATCTTG 32328 Query 61117 TGTTCTTATCAACAACCAACTTAAAGTCTCCAAATAGCCCATAGTAAAAGTTGTCTTTAA 61176 | || ||||| | | || ||||| ||| |||||| ||||| ||| | || ||||||| Sbjct 32327 TATTTTTATCTATTATTAATTTAAAATCTTCAAATAAACCATAATAATAATTATCTTTAA 32268 Query 61177 TATGTTCATAACATATATCATTCAA 61201 | ||||||||||||||||| || || Sbjct 32267 TTTGTTCATAACATATATCTTTTAA 32243 Score = 107 bits (118), Expect = 3e-18 Identities = 148/205 (72%), Gaps = 14/205 (7%) Strand=Plus/Minus Query 116829 TTTTATGGTCATAAAATCTCAATAACtttttt-gatt------tttCTAACACAGTCCAA 116881 |||| | || |||| || ||||| | || ||| |||| |||||||| || Sbjct 32435 TTTTTTCGTAATAATAT-TCAATTAATTCTTTAGATTGTTTATTTTCTAAC------CAT 32383 Query 116882 TTTCTGAATTTTTTGCCACCATCTTTGCAAAGTTTGGTGGCATTAAAATATCCCGTCTCC 116941 ||| | ||| |||| || |||||||| || | ||| || ||||||||||||| || | Sbjct 32382 TTTTTAAATCTTTTTCCTCCATCTTTACATAATTTTGTTGCATTAAAATATCTTGTATTT 32323 Query 116942 TTATCGACAACCAACTTAAAGTCTCCAAATATCCCATGGTGGAAATTATCCTTGATTTGT 117001 ||||| | | || ||||| ||| |||||| |||| | ||||||| || |||||| Sbjct 32322 TTATCTATTATTAATTTAAAATCTTCAAATAAACCATAATAATAATTATCTTTAATTTGT 32263 Query 117002 TCATAACATATATCATTCAACGATG 117026 |||||||||||||| || || |||| Sbjct 32262 TCATAACATATATCTTTTAAAGATG 32238 >seq44439 Length=35018 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 61010 TTTACTTTGATAATGTTCCAACAATTTTTTGGATT-TTTCCAGACGAGACCAATTCGTAA 61068 ||| || | ||||||| | | |||| ||| |||| ||| | | |||| || ||| Sbjct 11461 TTTTCTGTAATAATGTACAATTAATTCTTTAGATTGTTTATTTTCTA-ACCATTTTTTAA 11519 Query 61069 AtttttttCCTCCATAATTGCAGAGTTTGGTTGCATTAAAACAACCTGTGTTCTTATCAA 61128 || |||||||||||| | || | ||| |||||||||||| | ||||| || ||||| Sbjct 11520 ATCTTTTTCCTCCATCTTAACATAATTTTGTTGCATTAAAATATCCTGTATTTTTATCTC 11579 Query 61129 CAACCAACTTAAAGTCTCCAAATAGCCCATAGTAAAAGTTGTCTTTAATATGTTCATAAC 61188 | || ||||| |||||||||| ||||| ||| | || |||||||| |||| ||| | Sbjct 11580 TTATTAATTTAAAATCTCCAAATAAACCATAATAATAATTATCTTTAATTTGTTTATAGC 11639 Query 61189 ATATATCATTCAA 61201 ||||||| || || Sbjct 11640 ATATATCTTTTAA 11652 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 116878 CCAATTTCTGAATTTTTTGCCACCATCTTTGCAAAGTTTGGTGGCATTAAAATATCCCGT 116937 ||| ||| | ||| |||| || ||||||| || | ||| || |||||||||||||| || Sbjct 11509 CCATTTTTTAAATCTTTTTCCTCCATCTTAACATAATTTTGTTGCATTAAAATATCCTGT 11568 Query 116938 CTCCTTATCGACAACCAACTTAAAGTCTCCAAATATCCCATGGTGGAAATTATCCTTGAT 116997 | ||||| | || ||||| |||||||||| |||| | ||||||| || || Sbjct 11569 ATTTTTATCTCTTATTAATTTAAAATCTCCAAATAAACCATAATAATAATTATCTTTAAT 11628 Query 116998 TTGTTCATAACATATATCATTCAACGATG 117026 ||||| ||| |||||||| || || |||| Sbjct 11629 TTGTTTATAGCATATATCTTTTAAAGATG 11657 >seq69487 Length=54441 Score = 96.9 bits (106), Expect = 5e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 61066 TAAAtttttttCCTCCATAATTGCAGAGTTTGGTTGCATTAAAACAACCTGTGTTCTTAT 61125 ||||| ||||| |||||| || | | ||| |||||||||||| | ||||| || |||| Sbjct 10098 TAAATCTTTTTGCTCCATCTTTATACAATTTTGTTGCATTAAAATATCCTGTATTTTTAT 10039 Query 61126 CAACAACCAACTTAAAGTCTCCAAATAGCCCATAGTAAAAGTTGTCTTTAATATGTTCAT 61185 | | | || | ||| |||||||||| ||||| ||| | | ||||||| ||||||| Sbjct 10038 CTATTATTAATTAAAAATCTCCAAATAAACCATAATAATAAATAACTTTAATTTGTTCAT 9979 Query 61186 AACATATATCATTCAA 61201 | |||||||| || || Sbjct 9978 AGCATATATCTTTTAA 9963 Score = 89.7 bits (98), Expect = 7e-13 Identities = 121/168 (72%), Gaps = 3/168 (2%) Strand=Plus/Minus Query 116879 CAATTTCTGAATTTTTTGCCACCATCTTTGCAAAGTTTGGTGGCATTAAAATATCCCGTC 116938 || ||| | ||| |||| | |||||||| | | ||| || |||||||||||||| || Sbjct 10105 CATTTTTTAAATCTTTTTGCTCCATCTTTATACAATTTTGTTGCATTAAAATATCCTGTA 10046 Query 116939 TCCTTATCGACAACCAACTTAAAGTCTCCAAATATCCCATGGTGGAAATTATCCTTGATT 116998 | ||||| | | || | ||| |||||||||| |||| | || || | || ||| Sbjct 10045 TTTTTATCTATTATTAATTAAAAATCTCCAAATAAACCATAATAATAAATAACTTTAATT 9986 Query 116999 TGTTCATAACATATATCATTCAACGATG---CCATTGTTTTTATATAT 117043 |||||||| |||||||| || || |||| |||| | |||||| || Sbjct 9985 TGTTCATAGCATATATCTTTTAAAGATGAGCTCATTTTATTTATAAAT 9938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 703768536869760