Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq42012 143 6e-29 seq45383 105 2e-17 seq75765 100 7e-16 seq84422 95.1 3e-14 seq76348 95.1 3e-14 seq54643 84.2 5e-11 seq38939 84.2 5e-11 >seq42012 Length=56607 Score = 143 bits (158), Expect = 6e-29 Identities = 191/260 (73%), Gaps = 8/260 (3%) Strand=Plus/Plus Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTA--TGCAGGCAT 304943 ||||||| |||| |||| || || || || |||||| |||| | ||| | || ||| Sbjct 11986 TTACAATTTCATGTTGCTACTTTGATTGACAATGAA-TTGCCAAATTTACCTAAAGCCAT 12044 Query 304944 CTCAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTC 305003 || | ||| || |||| |||| ||||| ||||| | ||| ||||||| || Sbjct 12045 G-CAGAAATCAGGGCGACCACTAAAATCTATTAAACAACGTCTAAAAAGTAAAGAAGGAA 12103 Query 305004 GTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACAC 305063 | ||| |||| ||| ||||||||||||||||||||||| |||||||| ||| ||||| | Sbjct 12104 GAATTAGAGGAAATTTAATGGGAAAACGTGTTGATTTTTCTGCAAGAACTGTTATCACTC 12163 Query 305064 CTGATTCTCAAATT--AGTCTTCATGAATTAGGAGTTCCAATTGAAATTGCTTTAAAACT 305121 ||||| |||||| || || ||||| |||||||||||| |||||| ||| | Sbjct 12164 CTGAT--CCAAATTTAAGAATTGATGAAGTAGGAGTTCCAAGATCAATTGCACAAAATTT 12221 Query 305122 AACATTTCCAGAGAAAGTTA 305141 ||| |||||||| | |||| Sbjct 12222 AACGTTTCCAGAAATTGTTA 12241 >seq45383 Length=59856 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 110757 TTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAA 110816 ||||| || ||| | |||||||||||| |||| || || ||||| | || | ||| Sbjct 54476 TTTGCAATATATTTGGAACCTTGGCATGCAGACATTTTCGAATTTCTCGATTTAAAAAAA 54535 Query 110817 AATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGAT 110876 ||| ||| |||||| | || |||||||||||||||||| | |||||| | ||| Sbjct 54536 AATACTGGAAAAGAAGAATGCCGTGCCCGTGATTTATTTTATGCACTTTGGATTCCCGAT 54595 Query 110877 TTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCT 110936 ||||| ||| | | ||| ||| ||| |||||||| | |||||||||||| | | Sbjct 54596 TTATTTATGCAGAGAGTTGAAGCTGATGATATGTGGTCATTGATGTGTCCTCATGAATGT 54655 Query 110937 CCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGA 110974 || | | |||| || || ||||| |||||||| Sbjct 54656 CCAAATTTGGCTGAAACATGGGGTAAAGAATTTGAAGA 54693 >seq75765 Length=33873 Score = 100 bits (110), Expect = 7e-16 Identities = 119/158 (75%), Gaps = 4/158 (3%) Strand=Plus/Minus Query 305329 GGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAA 305388 |||| |||||||| | ||||| || || |||||| || ||| |||||||||| | | Sbjct 28537 GGTTTTGTTCAATCGTCAACCTTCTCTTCATAAATTGAGTATTATGGCTCATATTGCACA 28478 Query 305389 AGTATTAT-CTGGATTGA-CATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCG 305446 ||| ||| | || || ||||||| || |||| | ||| || || ||||| ||||| Sbjct 28477 AGT--TATGCCACATAGAACATTTCGTTTTAATGAATGTGTATGCACACCTTACAATGCA 28420 Query 305447 GATTTTGATGGAGATGAAATGAATATGCATGTACCTCA 305484 ||||||||||| |||||||||||| | ||| | || || Sbjct 28419 GATTTTGATGGTGATGAAATGAATTTACATCTTCCACA 28382 >seq84422 Length=160705 Score = 95.1 bits (104), Expect = 3e-14 Identities = 92/118 (78%), Gaps = 3/118 (3%) Strand=Plus/Minus Query 113019 CCAATGCCTACAGCTTCGACTGCACAGATTCTCGGTAATAATGAATGTTTCGAGCCAATT 113078 |||||||| || ||||| |||||||| ||||| ||||||||||||| | ||||| | Sbjct 9219 CCAATGCCAACTGCTTCTACTGCACAAATTCTTGGTAATAATGAATCAATAGAGCCTTAT 9160 Query 113079 ACAAGTAATATTTATGTCCGACGTGTTCTAGCAGGTGAGTTT---GTACTTTGTAATA 113133 ||||||||||||||||| || | ||| || | || || ||| ||||| || |||| Sbjct 9159 ACAAGTAATATTTATGTGAGAAGAGTTTTATCTGGAGAATTTCAGGTACTGTGCAATA 9102 >seq76348 Length=48548 Score = 95.1 bits (104), Expect = 3e-14 Identities = 142/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 131435 TTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTCTGG 131494 ||||| ||| || ||| ||| | | | |||||||||||| ||| || | |||||| Sbjct 19736 TTTCCTATTGAATATCCAGATATCTGGCAAATGTATAAGAAAGCTGAAGCTTCATTCTGG 19795 Query 131495 ACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACCTTGA-- 131552 || || ||||| | ||| | | |||||||| | | |||||||| | | ||| Sbjct 19796 ACAGTAGAAGAAGTAGATCTTTCTAAAGATATGGTTCATTGGGAACGTCTGA--ATGAAG 19853 Query 131553 ATGAAAAAGATTTTGTTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATGGCATTGTTA 131612 |||||||| ||||| |||| | ||| | || || || || | |||||||| || |||| Sbjct 19854 ATGAAAAACATTTTATTTCACATGTTTTAGCTTTTTTTGCTGCTAGTGATGGTATAGTTA 19913 Query 131613 TTGAAAATCTTGTTATTAAT 131632 ||||||| | |||| |||| Sbjct 19914 ATGAAAATTTGGTTAGTAAT 19933 Score = 87.8 bits (96), Expect = 4e-12 Identities = 136/193 (70%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 131796 TTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATTCCGCT---AATTTTT 131852 |||||| ||||| || ||||| || || |||||| | |||||| || | ||| Sbjct 24951 TTAAAAGAAAAGCTGATTGGGCAATAAATTGGATTAA---TGATTCAACTTCCACATTTG 25007 Query 131853 CTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTG 131912 | | | ||||||| |||||| ||||||||| ||||| ||||| ||| | || | Sbjct 25008 GTGAACGTGTTGTAGCATTTGCTGCTGTTGAAGGAATATTTTTTTCTGGTTCATTTGCAG 25067 Query 131913 CTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCA 131972 | || || ||| | || ||| | ||| ||||||||||| | |||| |||| |||| | Sbjct 25068 CAATATTCTGGTTAAAAAAGAGAGGACTGATGCCTGGATTAACATTCAGCAATGAATTAA 25127 Query 131973 TCTCGAGAGATGA 131985 || |||||||| Sbjct 25128 TCAGTAGAGATGA 25140 >seq54643 Length=28400 Score = 84.2 bits (92), Expect = 5e-11 Identities = 141/201 (70%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 278698 TTTTGTTAATGGTATTAATACTTCAAAAGGTGGAAAACATGTTGATTATGTTCTTAATAA 278757 |||||| ||| |||| |||| |||||||||| |||||||||||||| | | Sbjct 19241 TTTTGTAAATAGTATAGCTACTACAAAAGGTGGTCGTCATGTTGATTATGTGACGGACCA 19182 Query 278758 GATTGTGAAGAAGATTTCAGAGATAATTGAGAAGAAGGA-AAAGAT----TA-AGGTAAA 278811 |||||||| || || ||| || || ||||||| | | || | || ||||||| Sbjct 19181 AATTGTGAACAAAGTTGTAGAAGTAGTTAAGAAGAAAAATAGAGGTGGTGTACAGGTAAA 19122 Query 278812 ATCAAATAATATTAAAGAACACTTGTTTATATTTGTAAATTGTTTGATTATAAATCCTTC 278871 | || | | | ||| | ||| ||| | ||||| |||||||| ||| |||||| | Sbjct 19121 ACCATTTCAGGTAAAAAATCACATGTGGGTGTTTGTTAATTGTTTAATTGAAAATCCAAC 19062 Query 278872 ATTTGATTCGCAAACGAAAGA 278892 |||||||| ||||| ||||| Sbjct 19061 TTTTGATTCACAAACAAAAGA 19041 Score = 84.2 bits (92), Expect = 5e-11 Identities = 141/201 (70%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 278698 TTTTGTTAATGGTATTAATACTTCAAAAGGTGGAAAACATGTTGATTATGTTCTTAATAA 278757 |||||| ||| |||| |||| |||||||||| |||||||||||||| | | Sbjct 21738 TTTTGTAAATAGTATAGCTACTACAAAAGGTGGTCGTCATGTTGATTATGTGACGGACCA 21797 Query 278758 GATTGTGAAGAAGATTTCAGAGATAATTGAGAAGAAGGA-AAAGAT----TA-AGGTAAA 278811 |||||||| || || ||| || || ||||||| | | || | || ||||||| Sbjct 21798 AATTGTGAACAAAGTTGTAGAAGTAGTTAAGAAGAAAAATAGAGGTGGTGTACAGGTAAA 21857 Query 278812 ATCAAATAATATTAAAGAACACTTGTTTATATTTGTAAATTGTTTGATTATAAATCCTTC 278871 | || | | | ||| | ||| ||| | ||||| |||||||| ||| |||||| | Sbjct 21858 ACCATTTCAGGTAAAAAATCACATGTGGGTGTTTGTTAATTGTTTAATTGAAAATCCAAC 21917 Query 278872 ATTTGATTCGCAAACGAAAGA 278892 |||||||| ||||| ||||| Sbjct 21918 TTTTGATTCACAAACAAAAGA 21938 >seq38939 Length=1034 Score = 84.2 bits (92), Expect = 5e-11 Identities = 141/201 (70%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 278698 TTTTGTTAATGGTATTAATACTTCAAAAGGTGGAAAACATGTTGATTATGTTCTTAATAA 278757 |||||| ||| |||| |||| |||||||||| |||||||||||||| | | Sbjct 185 TTTTGTAAATAGTATAGCTACTACAAAAGGTGGTCGTCATGTTGATTATGTGACGGACCA 244 Query 278758 GATTGTGAAGAAGATTTCAGAGATAATTGAGAAGAAGGA-AAAGAT----TA-AGGTAAA 278811 |||||||| || || ||| || || ||||||| | | || | || ||||||| Sbjct 245 AATTGTGAACAAAGTTGTAGAAGTAGTTAAGAAGAAAAATAGAGGTGGTGTACAGGTAAA 304 Query 278812 ATCAAATAATATTAAAGAACACTTGTTTATATTTGTAAATTGTTTGATTATAAATCCTTC 278871 | || | | | ||| | ||| ||| | ||||| |||||||| ||| |||||| | Sbjct 305 ACCATTTCAGGTAAAAAATCACATGTGGGTGTTTGTTAATTGTTTAATTGAAAATCCAAC 364 Query 278872 ATTTGATTCGCAAACGAAAGA 278892 |||||||| ||||| ||||| Sbjct 365 TTTTGATTCACAAACAAAAGA 385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185407640348088