Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq76947 127 5e-24 seq73005 127 5e-24 seq85547 102 2e-16 seq81434 93.3 1e-13 >seq76947 Length=48948 Score = 127 bits (140), Expect = 5e-24 Identities = 158/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| ||||| || || |||||||| |||||||| ||||||||| |||| Sbjct 23944 CAGATATTTGTAAAAACCCTTACTGGAAAAACTATCACTTTAGAAGTGGAACCAAGTGAC 23885 Query 206233 ACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | || ||||| || ||| || ||||| |||||||||||| || || || Sbjct 23884 ACCATTGAGAATGTAAAAGCTAAA-ATCCAAGATAAAGAAGGAATTCCTCCTGATCAGCA 23826 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||| | || || || |||||||| || ||||||||| | || | | |||||||| | Sbjct 23825 GAGATTAATTTTTGCTGGAAAGCAATTAGAAGATGGACGTACCCTTTCAGATTACAATAT 23766 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 |||||| || ||| ||||||||||| |||||| Sbjct 23765 CCAGAAGGAAAGTACACTTCACCTTGTATTGAGA 23732 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || ||||| |||||| ||||||||||| ||||||| | ||| Sbjct 23476 AAGACACTCACTGGTAAAACAATCACTCTGGAAGTGGAACCAAGTGACACAATTGAAAAT 23417 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||| |||||||| |||||||||||| || || || |||||||||| Sbjct 23416 GTAAAGGCAAAAATTCAAGACAAAGAAGGAATTCCACCTGATCAACAGCGACTTATCTTT 23357 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| |||||||||| | ||| || | ||||| || | || || || || Sbjct 23356 GCTGGTAAGCAACTGGAAGATGGTCGCACTCTGTCAGATTATAATATTCAAAAGGAATCA 23297 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 || ||||| || || | |||||||| Sbjct 23296 ACACTTCATCTGGTACTCAGACTTCG 23271 Score = 107 bits (118), Expect = 5e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || ||||| |||||||| |||||||||||||| || ||| Sbjct 23716 CAGATCTTTGTGAAGACACTCACTGGAAAAACCATCACTTTGGAAGTAGAGCCCAGTGAT 23657 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | ||| || ||| |||||| ||||| || ||||| ||| || || || Sbjct 23656 ACTATTGAAAATGTGAAGGCAAAGATCCAAGATAAGGAAGGTATTCCTCCAGATCAGCAG 23597 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | || || || ||||||||| |||||||||| | || | | || |||||| | Sbjct 23596 CGTTTGATTTTTGCAGGAAAGCAGCTGGAAGATGGTCGTACACTCTCAGACTACAACATA 23537 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 || || |||||||||||||| | || ||||||||||| Sbjct 23536 CAAAAGGAGTCTACTCTTCATTTGGTGCTGAGACTTCGA 23498 Score = 100 bits (110), Expect = 7e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| ||||| |||||||||||||| || ||||||||||| ||| ||| Sbjct 23032 CAAATATTTGTTAAAACACTCACAGGAAAAACCATTACTTTGGAAGTAGAACCGAGTGAT 22973 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| |||||| ||||| |||||||| ||| || || || Sbjct 22972 ACTATAGAGAATGTGAAGGCAAAGATCCAAGATAAAGAAGGCATTCCACCCGATCAGCAG 22913 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||| | || || || ||||| || | |||||||| | ||| | | ||||| || || Sbjct 22912 AGATTGATATTTGCTGGAAAACAACTTGAAGATGGTCGCACTCTTTCAGATTATAATATC 22853 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 |||||||| || ||||| || Sbjct 22852 CAGAAAGAATCCACTCTCCA 22833 >seq73005 Length=127446 Score = 127 bits (140), Expect = 5e-24 Identities = 158/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| ||| || ||||| || ||||| || ||||| ||||| ||| ||| Sbjct 43489 CAGATATTTGTCAAGACACTCACTGGTAAAACAATAACTTTAGAAGTTGAACCCAGTGAT 43548 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 ||| | ||| || ||||||||| || ||||| |||||||| ||| || ||| || Sbjct 43549 ACAATAGAAAATGTCAAAGCAAAA-ATCCAAGACAAAGAAGGCATTCCTCCTGACCAACA 43607 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | | ||||| || || ||||||||||||||||| | || ||| | || |||||| | Sbjct 43608 GCGTTTGATCTTTGCTGGGAAGCAGTTGGAAGATGGTCGCACCTTGTCTGACTACAACAT 43667 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 ||| |||||||| || || || |||||| | ||| Sbjct 43668 CCAAAAAGAGTCAACACTCCATCTTGTTCTCAGA 43701 Score = 104 bits (114), Expect = 6e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| ||| || || || || ||||| || || |||||||||||| ||| Sbjct 43033 CAGATATTTGTCAAGACACTTACTGGTAAAACCATTACCTTGGAAGTGGAACCCAGTGAT 43092 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| ||| || || || || |||||||| || ||| || Sbjct 43093 ACCATAGAAAATGTGAAAGCTAAA-ATCCAGGATAAGGAAGGAATACCTCCTGACCAGCA 43151 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | |||||||| || || ||||| ||||||||||| || || || | ||||||||| | Sbjct 43152 GCGTCTTATCTTTGCTGGCAAGCAATTGGAAGATGGCAGAACCCTGTCTGATTACAACAT 43211 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || || || || ||||| || ||| | ||| Sbjct 43212 TCAAAAGGAATCAACCCTTCATCTCGTTCTTAGA 43245 Score = 102 bits (112), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || || ||| |||||| || ||||| || || ||||| ||||||| ||| |||| Sbjct 43717 CAAATCTTTGTCAAAACACTGACAGGCAAGACTATCACCCTGGAAGTAGAACCCAGTGAC 43776 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| || || ||||| ||||||||||| || || ||| Sbjct 43777 ACTATTGAGAATGTGAAGGCTAAAATCCAAGACAAAGAAGGAATACCTCCAGATCAGCAA 43836 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||| || || ||||||||||||||||| | || ||| | || ||||| || Sbjct 43837 CGATTGATCTTTGCTGGCAAGCAGTTGGAAGATGGTCGCACCTTGTCTGACTACAATATC 43896 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || |||||||| || || || ||||| Sbjct 43897 CAAAAAGAGTCAACACTCCATCTTGT 43922 Score = 93.3 bits (102), Expect = 1e-13 Identities = 153/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA---AAGTTCT 206229 ||||| ||| || || || || || || || ||||| || ||||| || |||| Sbjct 44401 CAGATTTTTGTTAAGACACTGACTGGCAAGACCATCACATTAGAAGTAGAGCCAAGT--- 44457 Query 206230 GACACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGC 206288 |||||| | ||| ||||| || ||| ||||| || || ||||| ||| || || Sbjct 44458 GACACAATAGAAAATGTAAAAGCCAAA-ATTCAGGACAAGGAAGGTATTCCACCAGATCA 44516 Query 206289 TCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAA 206348 || || | || || || ||||| ||||||||||||||| | ||||| | || || || Sbjct 44517 GCAGAGGTTAATATTTGCAGGAAAACAGTTGGAAGATGGACGTACTTTATCAGACTATAA 44576 Query 206349 CGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 | | |||||||| || |||||||| | || || ||| Sbjct 44577 CATTCAGAAAGAATCCACTCTTCATTTGGTATTAAGA 44613 Score = 91.5 bits (100), Expect = 3e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||||||| ||||| | || || ||||| || || | || || ||| | |||| Sbjct 42805 CAGATATTTGTGAAAACATTAACTGGTAAAACAATTACCCTTGAGGTAGAACCTAGTGAC 42864 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | || || ||| |||||||| || || ||||| || || || || Sbjct 42865 ACAATTGAGAATGTGAAGACCAAGATTCAGGATAAGGAAGGGATCCCTCCAGATCAGCAG 42924 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||| || |||||||||||| |||||||||| | || || | ||||||||| | Sbjct 42925 CGTCTTATTTTTGCCGGAAAGCAGCTGGAAGATGGCCGAACCCTGTCTGATTACAACATT 42984 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 206387 || || || ||||| ||||| || ||| | || || Sbjct 42985 CAAAAGGAATCTACCCTTCATCTGGTTCTCAGGCT 43019 >seq85547 Length=49496 Score = 102 bits (112), Expect = 2e-16 Identities = 138/190 (73%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || ||||| || ||||| |||||||||||||| ||| ||| ||| | ||| Sbjct 24228 AAGACCCTCACTGGGAAAACTATCACTTTGGAAGTTGAACCAAGTGATACAATTGAAAAC 24287 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||||||| |||||||| |||||||| || || || || ||| | || || Sbjct 24288 GTGAAAGCAAAA-ATTCAAGATAAAGAAGGTATACCACCAGATCAACAGAGATTGATTTT 24346 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 || || || || ||||||||||| | |||||| | ||||| ||| | || || || || Sbjct 24347 TGCTGGGAAACAATTGGAAGATGGGCGTACTTTGTCTGATTATAACATTCAAAAGGAATC 24406 Query 206364 TACTCTTCAC 206373 || |||||| Sbjct 24407 AACACTTCAC 24416 Score = 86.0 bits (94), Expect = 1e-11 Identities = 148/208 (71%), Gaps = 14/208 (7%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA---AAGTTCT 206229 ||||| ||| ||||| | ||||| || || ||||| ||||||||||| ||| | Sbjct 24444 CAGATTTTTGTTAAAACATTAACAGGGAAGACCATCACCTTGGAAGTGGAGCCAAG---T 24500 Query 206230 GACACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGC 206288 ||||| | || || ||||| ||| |||||||| |||||||||||| || || Sbjct 24501 GACACCATTGAGAATGTAAAAGCTAAA-ATTCAAGATAAAGAAGGAATT---CCTCCCGA 24556 Query 206289 TCAA-AGACTT--ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTA 206345 |||| || || ||||| || || || ||||| ||||||||| | || || | ||||| Sbjct 24557 TCAACAGCGTTTGATCTTTGCAGGCAAACAGTTAGAAGATGGACGCACCTTATCAGATTA 24616 Query 206346 CAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || | || || || || || |||||| Sbjct 24617 TAATATTCAAAAGGAATCGACACTTCAC 24644 >seq81434 Length=18142 Score = 93.3 bits (102), Expect = 1e-13 Identities = 153/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGA---AAGTTCT 206229 ||||| ||| || || || || || || || ||||| || ||||| || |||| Sbjct 8833 CAGATTTTTGTTAAGACACTGACTGGCAAGACCATCACATTAGAAGTAGAGCCAAGT--- 8889 Query 206230 GACACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGC 206288 |||||| | ||| ||||| || ||| ||||| || || ||||| ||| || || Sbjct 8890 GACACAATAGAAAATGTAAAAGCCAAA-ATTCAGGACAAGGAAGGTATTCCACCAGATCA 8948 Query 206289 TCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAA 206348 || || | || || || ||||| ||||||||||||||| | ||||| | || || || Sbjct 8949 GCAGAGGTTAATATTTGCAGGAAAACAGTTGGAAGATGGACGTACTTTATCAGACTATAA 9008 Query 206349 CGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 | | |||||||| || |||||||| | || || ||| Sbjct 9009 CATTCAGAAAGAATCCACTCTTCATTTGGTATTAAGA 9045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1180421550763768