Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_025467.1 Length=17972 Score E Sequences producing significant alignments: (Bits) Value seq88054 98.7 1e-16 >seq88054 Length=21660 Score = 98.7 bits (108), Expect = 1e-16 Identities = 291/438 (66%), Gaps = 28/438 (6%) Strand=Plus/Plus Query 9560 GTTACCCAAGCTCCTAAAAAACCA---CTTCCA-GATGAAGCCATCCAACTCGCACAATC 9615 ||||||||||| |||||||||||| | |||| | | || ||| | || ||| Sbjct 12633 GTTACCCAAGCGCCTAAAAAACCAGCACCTCCACGTTCAATCCAGGGAGCT-----AATT 12687 Query 9616 TACTAAAACGA-TAGGACCACCTAATCCGTGAGAGG--TCCA-ATTTTGTTGTAAGGTCA 9671 | |||| | || || |||||||| | || |||| |||||| | ||| || | Sbjct 12688 GTGTTTTACGAATTGGCCCGCCTAATCCTTTAGGATCATCCACATTTTGATTTAACGTAA 12747 Query 9672 TAGCAAAATCTCCCGCTTTCACACCAACATGGCCAGCGCCTGAATTGGTCCACCAAACAA 9731 | || |||| |||||||| | |||||| || || || | | ||||| |||| |||| Sbjct 12748 TTGCCCAATCACCCGCTTTAATACCAACGTGTCCTGCAACGGTGTTGGTAAACCATACAA 12807 Query 9732 TAGCTCCGTTAGGTAATGTGTTCCATATC---TCACGAGAAGCATTATCATCATTAGGAT 9788 |||| || ||||| | ||||||||| | | ||||| ||| ||| |||| Sbjct 12808 TAGCACCTAACGGTAAACTATTCCATATCGTTTTGCTGATAGCAT---CATTATTTGGAT 12864 Query 9789 TACCATTTACCTTATACCAACCTGATGGAACTGGATTATTCCAAATGTCTTTAGCATAAT 9848 ||| || || | |||| | |||||| | |||| |||| ||||| || || Sbjct 12865 CACCTGGTATTTTTTTCCAATTTAATGGAAGAGAATTACGATAAATATCTTTTGCGTACA 12924 Query 9849 ATCCTG--AGGTGTCTAAA-CCTAAACCAAAAATTTGTGTGTTTAACCAACTAATTAAAT 9905 | |||| |||| ||| ||||||| || || || | |||| | ||||||| Sbjct 12925 AACCTGCTAGGT---TAAGTCCTAAACTCAA---TTCACGATTAATCCAAGTGATTAAAT 12978 Query 9906 CCACGCATTGCGCTCCGTAATGCCCATCAGTATCAAATGCTTGTCCTTGGTTTTCATTAC 9965 |||| ||||| || || ||| |||||| |||||| ||||| ||||| | |||| Sbjct 12979 CCACACATTGAGCACCATAAACACCATCAAAATCAAAAGCTTGGCCTTGTCTAACATTCG 13038 Query 9966 ACCAATCATATATTTTTT 9983 |||||| | |||| || Sbjct 13039 CCCAATCGTGAATTTGTT 13056 Score = 80.6 bits (88), Expect = 3e-11 Identities = 181/268 (68%), Gaps = 3/268 (1%) Strand=Plus/Minus Query 1010 AATT-TGGTGAATCTTGGACTTTAGGTCAAAACTGGACTTCAGTAGGAACACAATTCGAA 1068 |||| ||| |||| ||| ||| ||| || |||||| ||||| | | | || || Sbjct 21061 AATTATGGCAAATCATGGGATTTTGGTACGAATTGGACTAATGTAGGGAAAGATTTTGAG 21002 Query 1069 ACATTTATCAACAAATTCTTATTTCCAAAACTAAACGAAACACGTTTAATTCAAGTAGCT 1128 || | ||| ||||| || ||||| |||||| ||| ||||| |||||| | ||| Sbjct 21001 ACTTATATAAACAAGTTTTTATTCCCAAAAATAAGTGAAACTTTATTAATTGATCAAGCC 20942 Query 1129 TTAGGTAACTCATTTGACTGGTTAGCCCAAGAAGTTGACTTCGTAGGTCAATACAGTGAG 1188 ||||||| ||| | |||||||| ||| ||| | | | |||| | |||| Sbjct 20941 GTAGGTAATCGTTTTAATTGGTTAGCTAGAGAGGTTCCCGTTATTTCACAATTAACTGAG 20882 Query 1189 GAATATG-TAATCGAGGATACTATTCCAACAAACATGGATTTATCTAAAGATGAACTATT 1247 ||||||| | || | |||||| |||| ||| ||||||||||| |||| || Sbjct 20881 GAATATGTTTATTTA-GATACTGTTCCTGTTGGGATGAATTTATCTAAAAGTGAAGATTT 20823 Query 1248 AATGTTGAAACGTAACTATCCTGGAATG 1275 |||||| ||| | | |||||| | ||| Sbjct 20822 AATGTTAAAAAGACATTATCCTCGTATG 20795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 57330678513240