Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq73005 104 2e-17 seq76947 96.9 2e-15 seq85547 89.7 4e-13 >seq73005 Length=127446 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| |||||||| || || || ||||| || || ||| | || || || | | Sbjct 43942 ATGCAGATTTTTGTTAAGACACTGACTGGCAAGACCATCACATTAGAAGTAGAGCCGAGC 44001 Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909 ||| || || || ||| ||||| ||||| |||||| |||| || ||| Sbjct 44002 GACACCATAGAAAACGTAAAAGCCAAAATTCAGGACAAGGAAGGTATTCCACCAGATCAG 44061 Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969 || ||||||||||||| |||||||| ||||| || | ||||| |||||| || || ||| Sbjct 44062 CAGAGGTTAATTTTTGCAGGAAAACAGTTGGAAGATGGACGCACCTTGTCAGACTATAAC 44121 Query 27970 ATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || || ||||| ||| |||||| | ||| | | ||||||| || Sbjct 44122 ATTCAGAAAGAATCCACCTTGCATCTTGTTCTTAGACTGCGTGGTGG 44168 Score = 100 bits (110), Expect = 2e-16 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || ||||| ||||| || ||||| ||| |||||| | || || ||| | Sbjct 44170 ATGCAGATCTTTGTCAAAACACTGACTGGTAAAACTATTACTCTGGAGGTAGAACCAAGT 44229 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || |||| | ||| || ||| |||||| |||||||||||| |||| || | Sbjct 44230 GATACGATAGAAAAT--GTGAAAGCAAAAATTCAGGACAAAGAAGGTATTCCTCCCGATC 44287 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || || || |||||||| |||||||| || || | || | |||| ||||| | Sbjct 44288 AGCAGCGTTTGATCTTTGCCGGTAAACAATTAGAAGATGGGCGTACTCTGTCAGATTATA 44347 Query 27968 ACATCCAAAAAGA 27980 ||||||||||||| Sbjct 44348 ACATCCAAAAAGA 44360 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| || ||||| || || || ||||| ||| || || | || || ||| || Sbjct 43485 AATGCAGATATTTGTCAAGACACTCACTGGTAAAACAATAACTTTAGAAGTTGAACCCAG 43544 Query 27849 CGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 || | || | ||| |||||| |||||| ||||||||||| |||| || Sbjct 43545 TGATACAATAGAAAAT--GTCAAAGCAAAAATCCAAGACAAAGAAGGCATTCCTCCTGAC 43602 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966 || || || || || ||||| || || || ||||| || | |||| |||||| || ||| Sbjct 43603 CAACAGCGTTTGATCTTTGCTGGGAAGCAGTTGGAAGATGGTCGCACCTTGTCTGACTAC 43662 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||||||||||| || | ||| | ||| | | |||||||| || Sbjct 43663 AACATCCAAAAAGAGTCAACACTCCATCTTGTTCTCAGATTGCGTGGTGG 43712 Score = 82.4 bits (90), Expect = 5e-11 Identities = 158/231 (68%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 ||||||||| ||||| ||||| || || || || ||| || | || || ||| || Sbjct 43713 AATGCAAATCTTTGTCAAAACACTGACAGGCAAGACTATCACCCTGGAAGTAGAACCCAG 43772 Query 27849 CGACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 ||| | | | ||| || || ||||| ||||||||||| | || || Sbjct 43773 TGACACTATTGAGAAT--GTGAAGGCTAAAATCCAAGACAAAGAAGGAATACCTCCAGAT 43830 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966 |||||||| || || ||||| || || || ||||| || | |||| |||||| || ||| Sbjct 43831 CAGCAACGATTGATCTTTGCTGGCAAGCAGTTGGAAGATGGTCGCACCTTGTCTGACTAC 43890 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 || |||||||||||| || | ||| | || | | |||||||| ||| Sbjct 43891 AATATCCAAAAAGAGTCAACACTCCATCTTGTCCTTAGATTGCGTGGTGGC 43941 >seq76947 Length=48948 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||| |||||||| |||||||| || ||||| ||| || | || || ||| | Sbjct 23264 AATGCAGATTTTTGTAAAAACTCTCACAGGGAAGACTATAACTCTGGAAGTTGAACCTAG 23205 Query 27849 CGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCA 27908 ||| || || || ||| ||| ||| || |||||||| | || || || Sbjct 23204 TGACACCATAGAAAACGTAAAAGCAAAGATACAAGATAAAGAAGGCATACCTCCCGATCA 23145 Query 27909 GCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAA 27968 ||| || || || ||||||||||||||| |||| |||| || | | | ||||| ||||| Sbjct 23144 GCAGCGCTTGATCTTTGCCGGAAAACAACTGGAAGACGGTCGTACCCTCTCCGACTACAA 23085 Query 27969 CATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||| || ||||| ||| | || ||||| | | |||||||| || Sbjct 23084 CATTCAGAAAGAATCAACTCTCCACTTGGTGCTCAGGTTGCGTGGTGG 23037 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846 || ||||| || ||||| ||||| |||||||| ||| ||| || | || || ||| Sbjct 23950 AACATGCAGATATTTGTAAAAACCCTTACTGGAAAAACTATCACTTTAGAAGTGGAACCA 23891 Query 27847 ACCGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904 | ||| || | ||| || ||| ||||| || |||||||| |||| | Sbjct 23890 AGTGACACCATTGAGAAT--GTAAAAGCTAAAATCCAAGATAAAGAAGGAATTCCTCCTG 23833 Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964 | ||||| | ||||||||||| ||||| ||||| || || | ||| | | | || |||| Sbjct 23832 ATCAGCAGAGATTAATTTTTGCTGGAAAGCAATTAGAAGATGGACGTACCCTTTCAGATT 23773 Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||| ||||| || || || || | || | || ||| | |||||||| || Sbjct 23772 ACAATATCCAGAAGGAAAGTACACTTCACCTTGTATTGAGATTGCGTGGAGG 23721 >seq85547 Length=49496 Score = 89.7 bits (98), Expect = 4e-13 Identities = 162/235 (69%), Gaps = 14/235 (6%) Strand=Plus/Plus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 |||||||||||||||||| || || ||||||||| ||| || | || || ||| | Sbjct 24212 AATGCAAATTTTTGTGAAGACCCTCACTGGGAAAACTATCACTTTGGAAGTTGAACCAAG 24271 Query 27849 CGACGATGTACAATCG-----GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATG 27903 || |||||| | || ||| |||||| || ||||||||| | || Sbjct 24272 TGA-----TACAATTGAAAACGTGAAAGCAAAAATTCAAGATAAAGAAGGTATACCACCA 24326 Query 27904 GAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGAT 27963 || || || | || |||||||| || ||||||||||| || | || | ||||| ||| Sbjct 24327 GATCAACAGAGATTGATTTTTGCTGGGAAACAATTGGAAGATGGGCGTACTTTGTCTGAT 24386 Query 27964 TACAACATCCAAAAAGA--GAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || ||||| ||||| || | ||||| || ||||| | |||||| | || || Sbjct 24387 TATAACATTCAAAAGGAATCAACACTT--CACTTGGTGCTTCGTTTGAGAGGAGG 24439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355461619758216