Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq76947 127 2e-24 seq85547 104 2e-17 seq73005 84.2 2e-11 >seq76947 Length=48948 Score = 127 bits (140), Expect = 2e-24 Identities = 172/240 (72%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 39045 AAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTAT 39104 |||| | | || |||||||||||||| || || ||||| || ||| ||||| || || Sbjct 22796 AAATATTTGCATACCTCCTCTTAAGCGCAATACTAAATGGAGAGTGGATTCTTTCTGGAT 22855 Query 39105 ATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTG 39164 ||||||||| | ||| || || | || ||||| ||||| || |||||||| | | ||| Sbjct 22856 ATTATAATCTGAAAGAGTGCGACCATCTTCAAGTTGTTTTCCAGCAAATATCAATCTCTG 22915 Query 39165 CTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATC 39224 ||| |||| || | || ||||| || ||| || || | || | | ||||| Sbjct 22916 CTGATCGGGTGGAATGCCTTCTTTATCTTGGATCTTTGCCTTCACATTCTCTATAGTATC 22975 Query 39225 GCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| || || |||| || || ||||||| || || ||||||||||| |||||||| Sbjct 22976 ACTCGGTTCTACTTCCAAAGTAATGGTTTTTCCTGTGAGTGTTTTAACAAATATTTGCAT 23035 >seq85547 Length=49496 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 |||||||| | || | || ||||||| || ||||||||||| ||||||||||| | | Sbjct 24895 CCTCCTCTGAGACGAAGTACTAAATGTAAGGTACTCTCTTTTTGAATATTATAATCCGAA 24836 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || || | || || || |||||||| ||||| || || | ||| || || | || Sbjct 24835 AGAGTACGACCATCTTCCAGTTGTTTGCCAGCAAAGATGAGTCTCTGTTGATCAGGTGGA 24776 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || || || || |||||| ||| | | | | ||||| || | ||||| Sbjct 24775 ATGCCTTCCTTATCTTGGATTTTAGCTTTCACATTTTCAATGGTATCACTGGGTTCCACT 24716 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| || || |||| || || | ||||||||||| |||||||| Sbjct 24715 TCCAGAGTAATTGTTTTCCCTGTTAATGTTTTAACAAAAATTTGCAT 24669 Score = 98.7 bits (108), Expect = 9e-16 Identities = 170/246 (69%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 39039 TAACTAAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTT 39098 |||| ||||||| || ||||||||||| || | ||||| || || || || || Sbjct 24684 TAACAAAAATTTG--CATTCCTCCTCTTAAACGAAGTACCAAGTGAAGTGTCGATTCCTT 24627 Query 39099 TTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAG 39158 ||| ||||||||||| | | || ||| | || || | ||||||||| ||||| || | Sbjct 24626 TTGAATATTATAATCTGATAAGGTGCGTCCATCTTCTAACTGTTTGCCTGCAAAGATCAA 24567 Query 39159 ACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCAC 39218 |||||| || |||| || | | ||||| || ||||| ||| | || | | Sbjct 24566 ACGCTGTTGATCGGGAGGAATTCCTTCTTTATCTTGAATTTTAGCTTTTACATTCTCAAT 24507 Query 39219 CGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGAT 39278 || || || | |||||| |||| ||||| | || || || | ||||||||||| || Sbjct 24506 GGTGTCACTTGGCTCCACTTCCAAGGTGATGGTCTTCCCTGTTAATGTTTTAACAAAAAT 24447 Query 39279 TTGCAT 39284 ||||| Sbjct 24446 CTGCAT 24441 >seq73005 Length=127446 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || ||||| || ||||| || || || || | | ||| || | || || Sbjct 43466 ACCAAGTGAAGGGTGCTTTCCTTTTGAATGTTGTAGTCAGATAATGTGCGGCCATCTTCC 43407 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 | ||| ||||| |||||||| ||||||||||| || | || | | ||||||||| | Sbjct 43406 AACTGCTTGCCAGCAAATATCAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCCTGG 43347 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || || || | | | | ||||| || | ||| || |||| || || | || Sbjct 43346 ATCTTTGCCTTTACATTTTCAATGGTATCACTTGGCTCTACTTCCAGAGTAATGGTCTTG 43287 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || |||| ||||||||||| || ||||| Sbjct 43286 CCTGTCAAAGTTTTAACAAAAATCTGCAT 43258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429061836080504