Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq84422 156 6e-33 seq76348 150 2e-31 seq45383 132 7e-26 seq73121 125 1e-23 seq55348 107 3e-18 seq89448 91.5 2e-13 seq55347 87.8 2e-12 >seq84422 Length=160705 Score = 156 bits (172), Expect = 6e-33 Identities = 128/156 (82%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 76850 CCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATATT 76909 |||||| ||||||||||| ||||| ||||| ||| | || || || ||||||||||| Sbjct 8654 CCATCCATAGAAATGCATACTTGTTAGTTTTCCATAGTTTGGTTCAGCAATATGAATATT 8713 Query 76910 CATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTT 76969 | |||||| |||||||| ||||||||||||||||| || |||||||||||||||| || Sbjct 8714 TAACGACTGGCTTTGATCAATGAAAGCTCCTCTATCTGCAGCCATTTTTATAATGGATTT 8773 Query 76970 TTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTT 77005 ||||| |||||||||| |||| || | | || ||| Sbjct 8774 TTGAGATATTTCCCAAACAGTTCTGTATAATTTTTT 8809 Score = 109 bits (120), Expect = 8e-19 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 |||||||||||||| || ||||| | ||||||||||| ||||| || || | ||| Sbjct 9116 TGAAATTCTCCAGATAAAACTCTTCTCACATAAATATTACTTGTATAAGGCTCTATTGAT 9175 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| || || | |||||| |||||||||||||||||||| || | | | |||||| Sbjct 9176 TCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTTGGCATTGGAGAAATAAGCAAACTA 9235 Query 77247 TTTCTGAGACCAT 77259 ||||| | ||||| Sbjct 9236 TTTCTTATACCAT 9248 >seq76348 Length=48548 Score = 150 bits (166), Expect = 2e-31 Identities = 160/211 (76%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 48523 CCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAA 48582 ||||||| ||||| ||||| |||||||||||||||||||| ||||| |||||| ||||| Sbjct 19925 CCAAATTTTCATTAACTATACCATCACTAGCAGCAAAAAAAGCTAAAACATGTGAAATAA 19866 Query 48583 AATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTT 48642 ||| |||||| | | |||| | ||| | | |||||||| || | |||||||| Sbjct 19865 AATGTTTTTCATCTTCATTCAGACGTTCCCAATGAACCATATCTTTAGAAAGATCTACTT 19806 Query 48643 CTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATT 48702 |||| ||||||| ||||| || || ||||| |||||||| | ||| ||||| |||| Sbjct 19805 CTTCTACTGTCCAGAATGAAGCTTCAGCTTTCTTATACATTTGCCAGATATCTGGATATT 19746 Query 48703 GGATTGGGAAAATAACAAATCTATTTGGATT 48733 || || || || ||||| | ||||||| Sbjct 19745 CAATAGGAAAGATGACAAAACGTCTTGGATT 19715 Score = 122 bits (134), Expect = 1e-22 Identities = 170/235 (72%), Gaps = 10/235 (4%) Strand=Plus/Minus Query 47935 CATTATA--AAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTAT 47992 ||||||| || || || |||||||||| | ||||||||||| || ||||| || Sbjct 25446 CATTATACAAACCTTATTGCATCCTAATTCAACTAGAAGTCTATCTGCTACAAATTCAAT 25387 Query 47993 ATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAG 48052 ||||| | |||| | | |||||||||||| |||||| ||| || ||||| || || || Sbjct 25386 ATATCGTCTCATAAGATTACAATTCATTCCAATAAGTGCAACAGGAAGAGCTTCTGTTAG 25327 Query 48053 AAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGATGTTACCGTTTCCTCACTTGG 48112 ||| |||||||| || || ||||| ||||| | || || ||| |||| Sbjct 25326 AAATTCTTGTTCTATTACTACTGCATCTTTGATTAT---TTGTATAATTCTCTC-TTTGG 25271 Query 48113 TGG----ATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACC 48163 || || | |||||| | |||||||||||||||||||||||||| ||||| Sbjct 25270 AGGGTTTATTTACCAAATGACTGAACATTAAACATGCAAAATCACAATGGAGACC 25216 Score = 109 bits (120), Expect = 8e-19 Identities = 108/139 (78%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 47794 TTTAAAAGTCAACATCTAAAGAAAAA---TGATTATCTTCTTGAGACATAACTCCCATTT 47850 ||||||| || |||| || | |||| |||| |||| || | ||| ||||| || Sbjct 39504 TTTAAAAATCTGCATCAAATGTAAAACACTGATCTTCTTTTTTTGCCATCACTCCACATT 39445 Query 47851 TTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 47910 | |||||||| || || | ||| |||||||| || ||||| ||||||| ||||||| || Sbjct 39444 TCTGATATTCTCCAACTCTTTTTTCGAAAAAGTTTGTTTTTCCTTCCAGAGATATATGTT 39385 Query 47911 CCATAAAATCAAATGGATT 47929 ||||||||||||||||||| Sbjct 39384 CCATAAAATCAAATGGATT 39366 Score = 105 bits (116), Expect = 9e-18 Identities = 156/220 (71%), Gaps = 7/220 (3%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 ||||||||||| |||||||| || ||||| | || ||||| ||||| | ||||| Sbjct 25140 TCATCTCTACTGATTAATTCATTGCTGAATGTTAATCCAGGCATCAGTCCTCTCTTTTTT 25081 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCG 48284 | ||| |||||||| || || || |||||||| ||||| ||||| || || |||||||| Sbjct 25080 AACCAGAATATTGCTGCAAATGAACCAGAAAAAAATATTCCTTCAACAGCAGCAAATGCT 25021 Query 48285 GTAAGTCTCTCTCCGTAACTGGCTTCGTTG-----TGTATCCACCGTTGTGCCCAATCAG 48339 || | || || || || |||| | ||||| | ||||||||||| Sbjct 25020 ACAACACGTTCACC--AAATGTGGAAGTTGAATCATTAATCCAATTTATTGCCCAATCAG 24963 Query 48340 CCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 48379 | || | || ||||| |||| ||||| || |||||||| Sbjct 24962 CTTTTCTTTTAACACATGGCAAAGTTTCAATTGCATTAAA 24923 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 48373 CATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTAT 48432 ||||||||| ||| | |||||| |||| || |||||||| ||||| ||||||| Sbjct 21768 CATTAAAGAAAAATTACCTTTCATCAGGATCTGAAATATAAGTATCAATTAACAGACTAT 21709 Query 48433 ACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTG 48492 ||||||| || |||| |||||| |||| || || ||||| ||||| || | ||||| | Sbjct 21708 ACATTTCTGAATGAACATTTTCTATTGAAATTTGGAATCCATAAAAGCAGCGTGCTTCAG 21649 Query 48493 T 48493 | Sbjct 21648 T 21648 >seq45383 Length=59856 Score = 132 bits (146), Expect = 7e-26 Identities = 171/235 (73%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 77924 TTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGA 77983 ||||||||| | ||||| ||| |||| || ||||||| || ||||||||||| Sbjct 54691 TTCAAATTCTTTACCCCATGTTTCAGCCAAATTTGGACATTCATGAGGACACATCAATGA 54632 Query 77984 CCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 78043 ||| | |||| | | ||||| | |||||| | ||| || ||||| || ||| ||| Sbjct 54631 CCACATATCATCAGCTTCAACTCTCTGCATAAATAAATCGGGAATCCAAAGTGCATAAAA 54572 Query 78044 TAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCAT 78103 || ||| |||| | |||||| ||||| ||||| ||||| | ||||||||| || | Sbjct 54571 TAAATCACGGGCACGGCATTCTTCTTTTCCAGTATTTTTTTTTAAATCGAGAAATTCGAA 54512 Query 78104 AATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTA 78158 ||| || | |||||| ||||| | ||||||||| | | | || |||| | ||||| Sbjct 54511 AATGTCTGCATGCCAAGGTTCCAAATATATTGCAAAAGCACCTGGTC-TCTATTA 54458 Score = 118 bits (130), Expect = 1e-21 Identities = 109/138 (79%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 |||| | |||||||| | || || || ||||| ||||||||||||||||| | || || Sbjct 46155 AGTTGCAGCATTAAAAAGAGTAGGTGAAGCATGTGTAAACCATTTTTCAGATAATAATTT 46096 Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517 || || ||||| || || || || || || ||| ||||||| ||||||||||| || Sbjct 46095 ATACGTCTCAATTGCAGAATCAATATCTTCTTTATGTATTCCTATGGCTACACGCATTAA 46036 Query 78518 CATATGCTGAGGTCTTTC 78535 |||||||||||||||||| Sbjct 46035 CATATGCTGAGGTCTTTC 46018 >seq73121 Length=35095 Score = 125 bits (138), Expect = 1e-23 Identities = 672/1049 (64%), Gaps = 61/1049 (6%) Strand=Plus/Plus Query 170969 ATGATTCCTATAAATCCTATGTTAGCAGAATCATGTGATTCTGTTAACAAGGCATTTAAA 171028 |||| |||||| || ||| | || ||| | ||| ||| | | | || |||||| Sbjct 21105 ATGACTCCTATTCGACCAATGCTTGCTGAACCTTGTCGATCTATAGAATATGCTTTTAAA 21164 Query 171029 AAATTTCCATCTGGAATGTTTGCAGAAGTAAAATATGATGGTGAACGAGTCCAAGTTCAT 171088 |||| |||| ||| |||| ||| ||| | ||||||||||| || || || ||||||||| Sbjct 21165 AAATGTCCAAATGGTATGTATGCTGAAATTAAATATGATGGAGAGCGTGTTCAAGTTCAT 21224 Query 171089 AAAAACAATAATAATTTTGCCTTCTTTAGCAGAAACATGAAACCAGTTTTACCACATAAA 171148 || || | |||| ||| | | ||||| ||| | |||||||| || ||||||| Sbjct 21225 AAGAAAGGTGATAAATTTACATATTTTAGTCGAAGTTTAAAACCAGTACAACAACATAAA 21284 Query 171149 GTTGATTATCTCAAGGAATACCTTCCTAAAGCATTTAAAAAAGCTACCTCTATTATCTTG 171208 | || | || || | | ||||||| ||| | ||| | | | || | Sbjct 21285 ATATCACATTTTAAAGACCATATAGCTAAAGCTTTTCATCAAGGAAAAGATTTAATTCTT 21344 Query 171209 GATTCCGAAATTGTTCTAGTTGATGAACATAATGTTCCA---CTT--CCGTTTGGAAGTC 171263 |||| || ||| ||||| | ||| ||| || || ||| || ||||||| | Sbjct 21345 GATTGTGAGATTCTTCTATTAGAT--ACAAAAACAGACAAACCTTTACCTTTTGGAACTT 21402 Query 171264 TAGGAATACACAAAAAGAAAGAGTACAAAAATGCTAATATGTGTTTGTTCGTCTTTGATT 171323 |||| | || |||||| | | ||| |||||| | | |||||||| || ||||| | Sbjct 21403 TAGGTGTTCATAAAAAGGCTGCTTTTAAAGATGCTACTGTTTGTTTGTTTGTATTTGACT 21462 Query 171324 GTTTATACTTTGATGGATTTGACAT----GACTGATATCCCATTGGTTGATAGACGATCG 171379 || |||| | | |||| || | ||||| || || || ||| | Sbjct 21463 GTATATATTATAATGGTAAAGATCTAATGGACTGTACTCTCA----AAGAAAGAAGGAAA 21518 Query 171380 TTTCTAACAGACATAATGACAGAAATACCTAATAGA--ATAGT--ATTTTCTGAATCGAC 171435 |||| ||| | ||| |||| | ||| ||| ||| | |||||||||| || Sbjct 21519 ATTCTTCAAGAAAATATGCAAGAAGT---TAA-AGATCATATTAAATTTTCTGAAATGAA 21574 Query 171436 A------AATATTACCAACGAATCTCATCTAACAGATGTATTGGAAGATG--TACTAACG 171487 | || | || || |||| | | || ||| ||| || | | ||| Sbjct 21575 ATTAATCAAAAATAGAAAAGAAT-TAAGTGAAATGATAAATT-----TTGCCTTCAAAC- 21627 Query 171488 AGAAAACTAGAAGGTTTGGTTTTAAAGGAT--ATTAATGGTATGTACGAGCCCGGAAAAC 171545 || | |||||||| | ||||| || ||| || || ||| ||| | || || |||| Sbjct 21628 AG-GGATTAGAAGGTCTTGTTTTGAAAGATCCATCAA--GTACTTACAAACCAGGGAAAC 21684 Query 171546 GTAGATGGCTTAAAATAAAGAGAGACTACTTGAACGAGGGTTCGATGGCGGATTCTGCAG 171605 || |||||||| | || | ||| || | | || ||| ||||| ||| ||| | Sbjct 21685 GTCATTGGCTTAAGGTGAAAAAAGATTATCTCCATGAAGGTAGTATGGCCGATAGTGCTG 21744 Query 171606 ATCTAGTAGTATTGGGGGCATATTATGGAAAAGGAACAAAGGGTGGAATGATGGCAGTCT 171665 | |||| || || || ||||||| ||| | || | || || || |||||| | | | Sbjct 21745 ACTTAGTTGTTTTAGGTGCATATTTTGGTACTGGTAGCAAAGGAGGGATGATGTCTATTT 21804 Query 171666 TTTTGATGGGCTGTTATG--ACGATGACTCTGGTAAATGGAAAACTGTGACTAAATGTTC 171723 |||||||||| |||| || | || | | | | |||||| ||||| |||||| || | Sbjct 21805 TTTTGATGGGATGTTTTGATAAGAGGTCCCAG--AAATGGTGTACTGTTACTAAA-GTAC 21861 Query 171724 ----TGGACATGATGATAATACTTTAAGGGCTTTACAGGACCAATTAAAGATGATTAAAA 171779 |||||| |||| |||| ||||| ||||| | ||| ||||| Sbjct 21862 ATGGAGGACATACTGATGCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTTAAAG 21921 Query 171780 TTAATAA-GAACCCCCAAAAAATTCCAGAGTGGTTAGTAGTTAATAAAATATAT-ATTCC 171837 | ||||| ||| | ||||| || ||||| ||||| ||| | | | ||||| Sbjct 21922 TCAATAATGAA----ATGGATATTCCTGAATGGTTGAATGTTAA-AAAGTCTTTAATTCC 21976 Query 171838 CGATTTTG-TAGTAGAGGATCCTAAACAATCTCCTATATGGGAGATTTCAGGAGCTGAGT 171896 |||||||| | ||| | ||||| ||| ||||| | ||||| || |||| || || | Sbjct 21977 CGATTTTGTTTGTA-AAGATCCAAAAACATCTCAAGTTTGGGAAATAACAGGTGCAGAAT 22035 Query 171897 TCACATCATCCAAGTCGCATACAGCAAATGGAATATCTATTAGATTTCCTAGATTCACTA 171956 | | | | | | ||||| |||||||||||||| || ||||||||| | | || Sbjct 22036 TTTCTAAAGCTGAAGCTCATACTGCAAATGGAATATCAATAAGATTTCCTCGTGTTACAT 22095 Query 171957 GGATTAGAGACGATAAAACATGGAAAGAA 171985 ||| | | |||||| ||||||||||| Sbjct 22096 TAATTCGTTATGATAAATCATGGAAAGAA 22124 >seq55348 Length=21870 Score = 107 bits (118), Expect = 3e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 77355 GATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAAT 77414 ||| ||| || |||||||| ||||| | || |||| ||||||||| ||||| ||| Sbjct 9531 GATTCATAGTAAGTTTCATATGGTCCAAATTCTTGTGCTAATTCACAACTTGCTTCTAAT 9472 Query 77415 GCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCA 77474 || || |||||||| ||||| ||||| | | || | | |||||||| ||||||| Sbjct 9471 GCACCATAATAAATAGTTTCAAAAATTTCAATGTTTAATTTCTGTGCTTCTTCACTATCA 9412 Query 77475 AACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAAC 77518 || ||||| ||| |||||| | |||||||||||| ||||| Sbjct 9411 AAAGGATACCTCAAAGAAATAAATGTATCTGCTAATCCTTGAAC 9368 >seq89448 Length=33718 Score = 91.5 bits (100), Expect = 2e-13 Identities = 96/126 (76%), Gaps = 3/126 (2%) Strand=Plus/Minus Query 43310 ACCTGTGTTAGAGATCGCCAATCCATGTTAGCACTTCCTAAATAAATATGTCTATTATCT 43369 ||||| |||| | ||||| ||||| ||||||||||| | ||||| ||| ||||||| Sbjct 5355 ACCTGAGTTAATGCACGCCAGTCCATATTAGCACTTCCAATATAAAAATGCTGATTATCT 5296 Query 43370 GATATCCAAAATTTAGTATGAAGAACTCCA---CCTAGAATATTTGCAATATCCACATAT 43426 |||||||||||| ||||| ||||||||| || |||| |||| || || || || Sbjct 5295 ATTATCCAAAATTTTGTATGGAGAACTCCACTTCCAAGAAGTTTTGTAAAATTCAAATTC 5236 Query 43427 CTCACT 43432 || ||| Sbjct 5235 CTTACT 5230 >seq55347 Length=19033 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 77924 TTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGA 77983 ||||||||| ||||||||||||| || ||||| |||||| ||| ||||| | ||| Sbjct 17333 TTCAAATTCTCTTCCCCAAACATCAGATAAACCAGGTGATTCATGTGGACACATAAGTGA 17274 Query 77984 CCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATA 78041 ||| | | || | |||| || |||||||||||||| ||||||||| |||||| Sbjct 17273 CCAAATTTCGTTTTTTTCCACTCTTTGCATAAAGAGATCAGATATCCATAGTGCAATA 17216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693866388069120