Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesobuthus_20martensii_20[genbank_20GCA_5F000484575.1_202013-10-28] 92,408 sequences; 925,546,267 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq73121 179 5e-40 seq76348 172 8e-38 seq84422 159 5e-34 seq45383 141 1e-28 seq55348 95.1 2e-14 seq55347 87.8 3e-12 seq89448 84.2 3e-11 >seq73121 Length=35095 Score = 179 bits (198), Expect = 5e-40 Identities = 685/1045 (66%), Gaps = 53/1045 (5%) Strand=Plus/Plus Query 169537 ATGACTCCTATCAATCCTATGTTGGCCGAATCATG-CGATTCTGTTAACAAGGCATTTAA 169595 ||||||||||| || ||| | || ||| | || |||| || | | | || ||||| Sbjct 21105 ATGACTCCTATTCGACCAATGCTTGCTGAACCTTGTCGAT-CTATAGAATATGCTTTTAA 21163 Query 169596 AAAATTTCCATCTGGGATGTTTGCAGAAGTCAAATATGACGGTGAACGAGTGCAAGTTCA 169655 ||||| |||| ||| |||| ||| ||| | |||||||| || || || || |||||||| Sbjct 21164 AAAATGTCCAAATGGTATGTATGCTGAAATTAAATATGATGGAGAGCGTGTTCAAGTTCA 21223 Query 169656 TAAAAATAATAACAACTTTGCCTTCTTTAGTAGAAATATGAAACCAGTTTTACCACATAA 169715 ||| || | | || ||| | | |||||| ||| | | |||||||| || |||||| Sbjct 21224 TAAGAAAGGTGATAAATTTACATATTTTAGTCGAAGTTTAAAACCAGTACAACAACATAA 21283 Query 169716 AGTTGATTATCTCAAAGAATACCTTCCTAAAGCATTTAAAAAAGCTACGTCTATTATCTT 169775 | | || | ||||| | | ||||||| ||| | ||| | | | || | Sbjct 21284 AATATCACATTTTAAAGACCATATAGCTAAAGCTTTTCATCAAGGAAAAGATTTAATTCT 21343 Query 169776 GGATTCTGAAATTGTTCTAGTTGA--CGAACACA-ATATACCACTTCCGTTTGGAAGTTT 169832 |||| ||| ||| ||||| | || | || ||| | | ||| | || ||||||| ||| Sbjct 21344 TGATTGTGAGATTCTTCTATTAGATACAAAAACAGACAAACCTTTACCTTTTGGAACTTT 21403 Query 169833 AGGAATACACAAAAAGAAAGAATATAAAAACTCTAATATGTGTTTGTTCGTCTTTGATTG 169892 ||| | || |||||| | | |||| | ||| | | |||||||| || ||||| || Sbjct 21404 AGGTGTTCATAAAAAGGCTGCTTTTAAAGATGCTACTGTTTGTTTGTTTGTATTTGACTG 21463 Query 169893 TCTATACTTTGATGGATTTGATAT----GACTGATATCCCATTGGTTGATAGAAGATCTT 169948 | |||| | | |||| ||| | ||||| || || | || ||| || Sbjct 21464 TATATATTATAATGGTAAAGATCTAATGGACTGTACTCTCAAAGAAAGAAGGAAAAT--- 21520 Query 169949 TTCTCAAAGATGTAATGACAGAAATACCTAATAGA--ATAGTA--TTTTCGGAATTGACA 170004 ||| |||| ||| |||| | ||| ||| ||| || ||||| ||| ||| | Sbjct 21521 -TCTTCAAGAAAATATGCAAGAAGT---TAA-AGATCATATTAAATTTTCTGAAATGAAA 21575 Query 170005 AATATTACTAACGAATCACAACTGACAGATGTATTAGATGATGCACT--AACAAGAAAAC 170062 || | || | | || | | || | || || ||| | |||| | | Sbjct 21576 TTAATCAAAAATAGAAAAGAATTAAGTGAAATGATAAATTTTGCCTTCAAACAGGGAT-- 21633 Query 170063 TAGAAGGTTTGGTTTTAAAAGAT--ATTAATGGTATATATGAGCCAGGAAAACGTAGATG 170120 |||||||| | ||||| |||||| || || ||| || | ||||| |||||| || Sbjct 21634 TAGAAGGTCTTGTTTTGAAAGATCCATCAA--GTACTTACAAACCAGGGAAACGTCATTG 21691 Query 170121 GCTTAAAATAAAGAGAGACTACTTGAATGAGGGTTCGATGGCGGATTCTGCAGATTTAGT 170180 |||||| | || | ||| || | |||| ||| ||||| ||| ||| || ||||| Sbjct 21692 GCTTAAGGTGAAAAAAGATTATCTCCATGAAGGTAGTATGGCCGATAGTGCTGACTTAGT 21751 Query 170181 AGTATTGGGGGCATATTATGGAAAAGGAACAAAGGGTGGAATGATGGCAGTATTTTTGAT 170240 || || || ||||||| ||| | || | || || || |||||| | | |||||||| Sbjct 21752 TGTTTTAGGTGCATATTTTGGTACTGGTAGCAAAGGAGGGATGATGTCTATTTTTTTGAT 21811 Query 170241 GGGTTGCTACGAT--GACGACTCTGGTAAATGGAAGACTGTAACTAAATGTTC----TGG 170294 ||| || | ||| || | | | | |||||| ||||| |||||| || | || Sbjct 21812 GGGATGTTTTGATAAGAGGTCCCAG--AAATGGTGTACTGTTACTAAA-GTACATGGAGG 21868 Query 170295 ACATGATGATAACACTTTAAG-GGTTTTGCAAGACCAATTAAAGATGATTAAAATAAGTA 170353 |||| |||| || ||| || || ||| ||||| | ||| ||||| | | || Sbjct 21869 ACATACTGAT-GCAGTTTTAGAAAAATTACAAACAGAATTAGACATGGTTAAAGTCAATA 21927 Query 170354 AGGATCCCaaaaaaaTTCCAGAGTGGTTAGTAGTTAATAAAATATAT-ATTCCCGATTTT 170412 | || | | ||||| || ||||| ||||| ||| | | | |||||||||||| Sbjct 21928 ATGA---AATGGATATTCCTGAATGGTTGAATGTTAA-AAAGTCTTTAATTCCCGATTTT 21983 Query 170413 G-TAGTAGAGGATCCTACACAATCTCCAATCTGGGAGATTTCAGGAGCTGAGTTCACATC 170471 | | ||| | ||||| | | ||||| | | ||||| || |||| || || || | Sbjct 21984 GTTTGTA-AAGATCCAAAAACATCTCAAGTTTGGGAAATAACAGGTGCAGAATTTTCTAA 22042 Query 170472 ATC-GAAGTCTCATACGGCAAATGGAATATCTATTAGATTTCCT--AGATTCAGTAGGAT 170528 | | |||| ||||||| |||||||||||||| || ||||||||| | | || || || Sbjct 22043 AGCTGAAG-CTCATACTGCAAATGGAATATCAATAAGATTTCCTCGTGTTACATTA--AT 22099 Query 170529 CAGAGACGATAAGACATGGAAAGAA 170553 | | ||||| ||||||||||| Sbjct 22100 TCGTTATGATAAATCATGGAAAGAA 22124 >seq76348 Length=48548 Score = 172 bits (190), Expect = 8e-38 Identities = 164/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 47013 CAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAA 47072 |||||| ||||| ||||| |||||||||||||||||||| || || |||||| |||||| Sbjct 19924 CAAATTTTCATTAACTATACCATCACTAGCAGCAAAAAAAGCTAAAACATGTGAAATAAA 19865 Query 47073 ATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTC 47132 || ||||||||| | |||| | ||| | | |||||||| || | ||||||||| Sbjct 19864 ATGTTTTTCATCTTCATTCAGACGTTCCCAATGAACCATATCTTTAGAAAGATCTACTTC 19805 Query 47133 TTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTG 47192 ||| ||||||||||||| || || ||||| |||||||| | ||| ||||| |||||| Sbjct 19804 TTCTACTGTCCAGAATGAAGCTTCAGCTTTCTTATACATTTGCCAGATATCTGGATATTC 19745 Query 47193 GATCGGAAAAATAACAAATCTATTTGGATT 47222 || ||||| || ||||| | ||||||| Sbjct 19744 AATAGGAAAGATGACAAAACGTCTTGGATT 19715 Score = 136 bits (150), Expect = 6e-27 Identities = 163/221 (74%), Gaps = 9/221 (4%) Strand=Plus/Minus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 ||||||||||| |||||||| || ||||| | |||||||| ||||| | |||||| Sbjct 25140 TCATCTCTACTGATTAATTCATTGCTGAATGTTAATCCAGGCATCAGTCCTCTCTTTTTT 25081 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 | ||| ||||| || || || || |||||||| ||||| ||||| ||||| || ||||| Sbjct 25080 AACCAGAATATTGCTGCAAATGAACCAGAAAAAAATATTCCTTCAACAGCAGCAAATGCT 25021 Query 46774 ACAAGTCTCTCTCC------GTAACTGGCATCATTATGAATCCACCTTTGAGCCCAATCA 46827 |||| | || || | || | | |||||| |||||| || ||||||||| Sbjct 25020 ACAACACGTTCACCAAATGTGGAAGTTGAATCATT---AATCCAATTTATTGCCCAATCA 24964 Query 46828 GCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 46868 || ||| | || ||||| |||| ||||| || |||||||| Sbjct 24963 GCTTTTCTTTTAACACATGGCAAAGTTTCAATTGCATTAAA 24923 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 46862 CATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTAT 46921 ||||||||| ||| | |||||||| |||| || ||| ||||| ||||| ||||||| Sbjct 21768 CATTAAAGAAAAATTACCTTTCATCAGGATCTGAAATATAAGTATCAATTAACAGACTAT 21709 Query 46922 ACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAG 46981 ||||||||||||||| ||||| || | || || ||||| ||||| || | |||||||| Sbjct 21708 ACATTTCTGAATGAACATTTTCTATTGAAATTTGGAATCCATAAAAGCAGCGTGCTTCAG 21649 Query 46982 TAATCTGTACCTCT 46995 ||| || || ||| Sbjct 21648 TAACTTGAACTTCT 21635 Score = 107 bits (118), Expect = 3e-18 Identities = 166/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 46419 AGTAACATTATA--AAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAAT 46476 || ||||||||| || || || |||||||||| | ||||||||||| || ||| Sbjct 25451 AGCAACATTATACAAACCTTATTGCATCCTAATTCAACTAGAAGTCTATCTGCTACAAAT 25392 Query 46477 TCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCC 46536 || ||||| | |||| | | |||||||||||| || ||| || || ||||| || Sbjct 25391 TCAATATATCGTCTCATAAGATTACAATTCATTCCAATAAGTGCAACAGGAAGAGCTTCT 25332 Query 46537 GTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGATGTTACTGTTTCCTCA 46596 || ||||| |||||||| || || ||||| ||||| | | | | | || | Sbjct 25331 GTTAGAAATTCTTGTTCTATTACTACTGCATCTTTGATTATTTGTATAATTCTCTCTTTG 25272 Query 46597 CTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCC 46652 ||| || | |||||| | |||||||||||||||||||||||||| || || Sbjct 25271 GAGGGTTTATTTACCAAATGACTGAACATTAAACATGCAAAATCACAATGGAGACC 25216 Score = 105 bits (116), Expect = 1e-17 Identities = 107/139 (77%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 46283 TTTAAAAGTCGACATCTAAAGAAAAA---TGATTATCTTCTTGTGACATAACTCCCATTT 46339 ||||||| || |||| || | |||| |||| |||| || || ||| ||||| || Sbjct 39504 TTTAAAAATCTGCATCAAATGTAAAACACTGATCTTCTTTTTTTGCCATCACTCCACATT 39445 Query 46340 TTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 46399 | || ||||| || || | ||| |||||||| || ||||| ||||||| ||||||| || Sbjct 39444 TCTGATATTCTCCAACTCTTTTTTCGAAAAAGTTTGTTTTTCCTTCCAGAGATATATGTT 39385 Query 46400 CCATAAAATCAAACGGATT 46418 ||||||||||||| ||||| Sbjct 39384 CCATAAAATCAAATGGATT 39366 >seq84422 Length=160705 Score = 159 bits (176), Expect = 5e-34 Identities = 129/156 (83%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 75445 CCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATATT 75504 |||||| ||||||||||| ||||||||||| ||| | || || || ||||||||||| Sbjct 8654 CCATCCATAGAAATGCATACTTGTTAGTTTTCCATAGTTTGGTTCAGCAATATGAATATT 8713 Query 75505 CATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTT 75564 | |||||| |||||||| ||||||||||||||||| || |||||||||||||||| || Sbjct 8714 TAACGACTGGCTTTGATCAATGAAAGCTCCTCTATCTGCAGCCATTTTTATAATGGATTT 8773 Query 75565 TTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTT 75600 ||||| |||||||||| |||| || | | || ||| Sbjct 8774 TTGAGATATTTCCCAAACAGTTCTGTATAATTTTTT 8809 Score = 105 bits (116), Expect = 1e-17 Identities = 103/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 |||||||||||||| || ||||||| ||||||||||| ||||| || || | ||| Sbjct 9116 TGAAATTCTCCAGATAAAACTCTTCTCACATAAATATTACTTGTATAAGGCTCTATTGAT 9175 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| || || | |||||| ||||| |||||||| ||||| || | | | |||||| Sbjct 9176 TCATTATTACCAAGAATTTGTGCAGTAGAAGCAGTTGGCATTGGAGAAATAAGCAAACTA 9235 Query 75842 TTTCTGAGACCAT 75854 ||||| | ||||| Sbjct 9236 TTTCTTATACCAT 9248 >seq45383 Length=59856 Score = 141 bits (156), Expect = 1e-28 Identities = 173/235 (74%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 76519 TTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGA 76578 ||||||||| | ||||| ||| ||||| |||||||||| |||||||||||||| Sbjct 54691 TTCAAATTCTTTACCCCATGTTTCAGCCAAATTTGGACATTCATGAGGACACATCAATGA 54632 Query 76579 CCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 76638 |||| | |||| | | ||| | | |||||| | ||| || ||||| || ||| ||| Sbjct 54631 CCACATATCATCAGCTTCAACTCTCTGCATAAATAAATCGGGAATCCAAAGTGCATAAAA 54572 Query 76639 TAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCAT 76698 || ||| |||| | | |||||| ||||| ||||| ||||| | ||| || || || | Sbjct 54571 TAAATCACGGGCACGGCATTCTTCTTTTCCAGTATTTTTTTTTAAATCGAGAAATTCGAA 54512 Query 76699 AATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTA 76753 ||| || | |||||| ||||| | |||||| || | | |||| |||| | ||||| Sbjct 54511 AATGTCTGCATGCCAAGGTTCCAAATATATTGCAAAAGCACCTGGTC-TCTATTA 54458 Score = 107 bits (118), Expect = 3e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 |||| | |||||||| | ||||| || ||||| || |||||||||||||| | || || Sbjct 46155 AGTTGCAGCATTAAAAAGAGTAGGTGAAGCATGTGTAAACCATTTTTCAGATAATAATTT 46096 Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112 || || ||||| | | || ||||| || ||| ||||||| || |||||||| || Sbjct 46095 ATACGTCTCAATTGCAGAATCAATATCTTCTTTATGTATTCCTATGGCTACACGCATTAA 46036 Query 77113 CATATGCTGAGGTCGTTCT 77131 |||||||||||||| |||| Sbjct 46035 CATATGCTGAGGTCTTTCT 46017 >seq55348 Length=21870 Score = 95.1 bits (104), Expect = 2e-14 Identities = 101/130 (78%), Gaps = 4/130 (3%) Strand=Plus/Minus Query 75986 GCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTC--TTAT 76043 |||| ||| ||||| || ||||| ||||| |||||||| ||||| ||||| ||| | | Sbjct 9495 GCTAATTCACAACTTGCTTCTAATGCACCATAATAAATAGTTTCAAAAAT-TTCAATGTT 9437 Query 76044 TAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTA 76103 ||| ||| | ||||| ||||||||||||||| ||| |||||||| |||||||| Sbjct 9436 TAATTTCT-GTGCTTCTTCACTATCAAAAGGATACCTCAAAGAAATAAATGTATCTGCTA 9378 Query 76104 GTCCCTGAAC 76113 ||| ||||| Sbjct 9377 ATCCTTGAAC 9368 >seq55347 Length=19033 Score = 87.8 bits (96), Expect = 3e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 76519 TTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGA 76578 ||||||||| ||||||||||||| |||||||| |||||| |||||||| | ||| Sbjct 17333 TTCAAATTCTCTTCCCCAAACATCAGATAAACCAGGTGATTCATGTGGACACATAAGTGA 17274 Query 76579 CCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATA 76636 ||| | | || | || | || |||||||||||||| ||||||||| |||||| Sbjct 17273 CCAAATTTCGTTTTTTTCCACTCTTTGCATAAAGAGATCAGATATCCATAGTGCAATA 17216 >seq89448 Length=33718 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 41854 CCAATCCATATTAGCACTTCCTAAATAAATATGCATATTATCAGATATCCAAAATTTTGT 41913 ||| ||||||||||||||||| | ||||| |||| |||||| ||||||||||||||| Sbjct 5338 CCAGTCCATATTAGCACTTCCAATATAAAAATGCTGATTATCTATTATCCAAAATTTTGT 5279 Query 41914 GTGAAGAACTCCAC 41927 || |||||||||| Sbjct 5278 ATGGAGAACTCCAC 5265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712110889474560