Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microplitis_20demolitor_20[refseq_20GCF_5F000572035.2_202015-10-07] 1,794 sequences; 241,190,213 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq691 136 4e-27 seq628 113 5e-20 seq1070 102 8e-17 seq652 95.1 1e-14 >seq691 Length=387001 Score = 136 bits (150), Expect = 4e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| ||||| || ||||| ||||| || || | || || ||||| Sbjct 74996 AAAATGCAGATCTTCGTGAAAACTCTTACGGGAAAAACAATAACTTTAGAGGTTGAAGCT 74937 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | ||| |||| | || |||| ||||||||||| || || |||| Sbjct 74936 TCTGACACCATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCGGAT 74877 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || | |||| ||| || ||||| ||||| || | ||||||||| ||||||| Sbjct 74876 CAGCAGCGTTTAATCTTCGCTGGTAAACAACTGGAAGATGGTCGCACCCTCTCCGACTAC 74817 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||||| | || || || | ||||| || Sbjct 74816 AACATCCAGAAGGAATCTACCCTTCACTTGGTGTTACG 74779 Score = 134 bits (148), Expect = 1e-26 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||||||||| ||||| || ||||| ||||| |||| || ||||| | Sbjct 74081 ATGCAAATTTTCGTAAAAACCCTCACTGGTAAAACTATCACTCTCGAGGTTGAAGCATCG 74022 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | ||||| | |||| ||||| | |||||||| || || || | || || Sbjct 74021 GACACCATTGAAAACG-TAAAGGCTAAAATCCAGGACAAAGAAGGAATTCCACCAGATCA 73963 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| || || ||||| || || |||| | || || || ||||| Sbjct 73962 GCAGCGTCTCATCTTTGCTGGTAAACAACTTGAAGACGGTAGAACTCTTTCAGATTACAA 73903 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||| |||||| | ||||| ||| |||| ||||| Sbjct 73902 CATCCAAAAGGAGTCAACGCTTCATTTAGTATTGCG 73867 Score = 122 bits (134), Expect = 9e-23 Identities = 158/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | || || |||||||||||| |||| || ||||| | Sbjct 73169 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAAACCATCACCCTCGAAGTTGAAGCATCT 73110 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | ||||| | ||| || | ||| ||||||||||| || || | ||||| Sbjct 73109 GACACCATTGAAAACGTTAAAGCCAAGA-TTCAGGACAAAGAGGGGATTCCACCTGACCA 73051 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || || ||||| || || | ||||||||| |||||||| Sbjct 73050 GCAGCGTCTGATCTTCGCAGGTAAGCAGCTTGAAGATGGTCGCACCCTCTCGGACTACAA 72991 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||| || | || || || | || ||||| Sbjct 72990 CATCCAGAAAGAATCTACCCTTCACTTGGTCTTGCG 72955 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || ||||| ||||| ||||| |||| || ||||| || Sbjct 73397 ATGCAGATCTTCGTTAAAACTCTTACGGGTAAAACGATCACTCTCGAAGTTGAAGCATCC 73338 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | ||||| |||| | ||||| | |||||||| || || || | || || Sbjct 73337 GATACCATTGAAAACG-TCAAAGCTAAAATCCAGGACAAAGAAGGAATTCCGCCAGATCA 73279 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||| | || || ||||| || || |||| || || || |||||||| Sbjct 73278 GCAGCGTCTCATTTTTGCTGGTAAACAACTCGAAGACGGACGAACTCTTTCTGACTACAA 73219 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||| ||||| || | || || || | |||||||| Sbjct 73218 CATTCAGAAAGAATCAACACTTCACTTGGTGTTGCG 73183 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | || || || || ||||| | || || || ||| | Sbjct 74765 ATGCAGATCTTTGTCAAGACATTGACTGGAAAGACAATCACTCTGGAAGTAGAGGCCTCA 74706 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | ||||| | |||| || |||| |||||||| || || || | || || Sbjct 74705 GACACTATTGAAAACG-TAAAGGCCAAGATTCAAGACAAAGAAGGAATTCCTCCAGATCA 74647 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| || ||||| || || |||| | || || |||||||| Sbjct 74646 GCAGCGTCTCATCTTCGCTGGTAAACAACTTGAGGACGGAAGAACTCTTTCTGACTACAA 74587 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||| || | || || || | || ||||| Sbjct 74586 CATCCAGAAAGAATCTACCCTTCACTTGGTCTTGCG 74551 >seq628 Length=266871 Score = 113 bits (124), Expect = 5e-20 Identities = 153/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||||||||| || || || | || || |||||||||||| | || || ||||| | Sbjct 232920 AATGCAAATATTTGTTAAGACATTGACTGGTAAAACCATCACCTTAGAAGTTGAAGCTTC 232861 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | | |||| | || | || |||| ||||||||||| ||||| | |||| Sbjct 232860 TGACACCATCGAGAACG-TAAAAGCTAAGATTCAAGACAAAGAGGGGATCCCTCCAGACC 232802 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || | |||| ||| || || ||| |||| || | || || ||| ||||||| Sbjct 232801 AGCAGAGATTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGTACTCTCTCAGACTACA 232742 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||| || |||||| | || || || || || Sbjct 232741 ACATTCAAAAGGAGTCAACCCTCCACCTCGT 232711 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 40685 GAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAG 40744 |||||||||| || || || ||||| | ||||| || || || || | || || || | Sbjct 233152 GAAAAATGCAGATCTTTGTTAAAACTTTGACGGGGAAGACAATTACTTTGGAAGTTGAGG 233093 Query 40745 CCACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 | | |||| | ||| |||| | || |||| ||||| ||||| ||||| | | Sbjct 233092 CTTCTGACACTATTGAAAATGTCAAAGCTAAGATTCAAGACAAGGAGGGGATCCCTCCAG 233033 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 ||||||| || | |||| ||| || || ||| |||| || | || || | |||| Sbjct 233032 ACCAGCAGAGATTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGAACATTATCAGACT 232973 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||| ||||||||||| |||| || ||||| || Sbjct 232972 ACAATATCCAGAAGGAATCCACACTACATCTCGT 232939 >seq1070 Length=378361 Score = 102 bits (112), Expect = 8e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| |||||| | ||||| |||||||| ||| | || ||||| || Sbjct 194412 AAAATGCAGATTTTCGTGAAAACGTTGACGGGTAAAACCATTACCCTTGAAGTCGAGGCT 194471 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | ||| |||| | ||||| | || || ||||| || || | || Sbjct 194472 TCTGACACAATCGAAAATGTCAAAGCTAAAATCCAAGATAAGGAGGGAATTCCTCCAGAT 194531 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 |||||||| || || | || || |||||| |||| || | || || || |||||| Sbjct 194532 CAGCAACGTCTGATTTTTGCTGGAAAACAGTTGGAAGATGGACGTACTCTTTCTGACTAC 194591 Query 40867 AACATCCAGAA 40877 ||||||||||| Sbjct 194592 AACATCCAGAA 194602 >seq652 Length=1546420 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| || ||||| ||||| || || || || |||||||| ||||||||||| ||| | Sbjct 810767 GCATGTACTGGCATTTTTTGCTGCTTCTGATGGAATCGTCAATGAGAATCTGGTAGAGAG 810826 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || ||||| || || | || || || || ||||| || ||||| ||||| || Sbjct 810827 ATTCAGCCAAGAGGTACAAGTTACTGAAGCCCGTTGTTTCTATGGGTTTCAAATCGCAAT 810886 Query 116872 GGAGAACGTGCACTCGGAAATGTATTC 116898 || || || || || ||||||||||| Sbjct 810887 TGAAAATGTTCATTCTGAAATGTATTC 810913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515207646209440