Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microplitis_20demolitor_20[refseq_20GCF_5F000572035.2_202015-10-07] 1,794 sequences; 241,190,213 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq691 111 2e-19 seq1776 107 2e-18 seq591 107 2e-18 seq628 95.1 1e-14 seq796 93.3 5e-14 seq1777 89.7 6e-13 seq802 89.7 6e-13 seq719 87.8 2e-12 seq577 87.8 2e-12 >seq691 Length=387001 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||||||||| || | ||| || || ||||| ||||| |||| ||||| || | Sbjct 73182 ACGCAACACCAAGTGAAGTGTTGATTCTTTCTGAATGTTGTAGTCAGAAAGAGTTCGTCC 73241 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || || || |||||||| || ||||| |||||||| || | ||| | | || || Sbjct 73242 GTCTTCGAGTTGTTTACCAGCAAAAATGAGACGCTGCTGATCTGGCGGAATTCCTTCTTT 73301 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 |||| |||||| ||||| | | | || ||| | ||| || |||| ||||| Sbjct 73302 GTCCTGGATTTTAGCTTTGACGTTTTCAATGGTATCGGATGCTTCAACTTCGAGAGTGAT 73361 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| ||||| || || || || ||||| ||||| Sbjct 73362 CGTTTTACCCGTAAGAGTTTTAACGAAGATCTGCAT 73397 Score = 91.5 bits (100), Expect = 2e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||| ||||| || | || || || || || ||||| || | || || || | Sbjct 72954 ACGCAAGACCAAGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACC 73013 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||||||||| ||||| || || ||||||||||| | || | | ||| || Sbjct 73014 ATCTTCAAGCTGCTTACCTGCGAAGATCAGACGCTGCTGGTCAGGTGGAATCCCCTCTTT 73073 Query 43088 GTCCATGATTTTTTGTTTGAGCG-TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 |||| ||| | || | || | || | | | ||||| | ||| || |||| |||| Sbjct 73074 GTCC-TGAATCTTGGCTTTAACGTTTTCAATGGTGTCAGATGCTTCAACTTCGAGGGTGA 73132 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||||| || || | ||||| |||||||| ||||| Sbjct 73133 TGGTTTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 73169 Score = 82.4 bits (90), Expect = 9e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 |||||| || | ||| | ||| ||| || ||||| |||||||||| ||||| | | Sbjct 73410 ACGCAATACTAGATGAAGTGTTGACTCTTTCTGAATGTTGTAATCAGAAAGAGTTCTTCC 73469 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || || || ||||||||||| || || || || ||||| | || | | |||||| Sbjct 73470 ATCCTCGAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCTGGTGGAATACCCTCCTT 73529 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 | | ||| | || | |||| || | | || || | ||| || || | |||| Sbjct 73530 AT-CTTGAATCTTGGCCTTGACGTTCTCGATGGTATCAGAAGCTTCGACCTCCAAGGTGA 73588 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | ||||| || || || ||||| || ||||||||||| Sbjct 73589 TTGTTTTACCGGTAAGAGTCTTCACGAAGATTTGCAT 73625 >seq1776 Length=663104 Score = 107 bits (118), Expect = 2e-18 Identities = 76/86 (88%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| | |||||| ||| ||||||||||||| ||||||||||||||||||||| |||| Sbjct 289873 AAAAAATGTCTCCTTGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 289814 Query 60117 TCACCACTATACTACCGAGGA-TTGA 60141 | |||||||||||||| |||| |||| Sbjct 289813 TGACCACTATACTACCAAGGACTTGA 289788 >seq591 Length=3472834 Score = 107 bits (118), Expect = 2e-18 Identities = 281/422 (67%), Gaps = 10/422 (2%) Strand=Plus/Plus Query 14600 ACAGAGCCTCTAACCCGAAAACCTTTTTGTGGAGGCCTTGTTCTGACGGATAGCGACAGA 14659 ||||| || | || || || || ||| ||| || | ||| ||| |||| | |||| Sbjct 2519406 ACAGAACCACGTACACGCAAGCCATTTAATGGTGGTATAGTTTTGATCGATACCC-CAGA 2519464 Query 14660 TTT-GATGCCGACAACGATTACATAATATCGGCCACGTATTTTGAAGGGAAAAAAGTGCA 14718 ||| ||| | || ||||| ||| |||| || ||||| ||| | |||||| | | Sbjct 2519465 TTTTGATAAATATAATGATTATATATTATCCGCAACGTACTTTAATTATAAAAAAATAAA 2519524 Query 14719 TTACAACATTGGCTTATTTTACTATGTATTGTGGAGTATATGCAGTGGCAAGGAGTGGAT 14778 ||||| ||||| |||||||| ||||| |||| | || || | || | ||||| Sbjct 2519525 CTACAATATTGGTTTATTTTATTATGTTTTGTATAAAATTTGTGAAAGTAAACAATGGAT 2519584 Query 14779 GGATAAAAATGTGGCTGCCCAATTCCTGAAGTACGTCAAACGTCGCATCGAAATTACAAC 14838 |||||||||||| || ||| | || || || | | | ||||| | || ||||| Sbjct 2519585 GGATAAAAATGTTATTGATCAACTTAAAAAATATGTTATAAGACGCATTAAGATGACAAC 2519644 Query 14839 ATGCAAGCTTGGACTCTCGTCTCTTCCCCTGGACCCACAAATGAATACGTCACTGCTGAC 14898 ||| || | ||| | || || | || || ||||| || | || ||| | | ||| Sbjct 2519645 ATGTAAAATAGGATTATCATCGTTACCACTTGACCCTCAGGAAATCACATCATTACCGAC 2519704 Query 14899 CGCATTATGGTACTGTGTCGACCTCTCATCCGACATATTTAAAAATGA---CAA-AGTTA 14954 ||| |||||||||| || || | || || | |||||||| |||| ||| | || Sbjct 2519705 TGCACTATGGTACTGCGTTGAATTGTCTTCATATCTATTTAAAGATGATCCCAATAATT- 2519763 Query 14955 ATTACGCCTTTGAACGATTACGACACTATTATGGAGTTGCTAAACACATGATTTTTATAT 15014 ||| || ||| |||| || ||| |||||||||| | || |||||| |||| Sbjct 2519764 -TTATGC--ACGAAAGATTGAGAATGTATCATGGAGTTGCGCATCATATGATTGAAATAT 2519820 Query 15015 TG 15016 || Sbjct 2519821 TG 2519822 >seq628 Length=266871 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||| ||||| || | ||||| || | || || | ||||||||||||||| Sbjct 232728 CTCCTTTTGAATGTTGTAGTCTGAGAGAGTACGGCCATCTTCCAACTGCTTACCAGCGAA 232787 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || | || ||||||||| | || | | ||| |||| | ||| | || | ||| | Sbjct 232788 GATCAATCTCTGCTGGTCTGGAGGGATCCCCTCTTTGT-CTTGAATCTTAGCTTTTACGT 232846 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 || | | ||||| | ||| || || | ||||||||||| || || | ||||| | Sbjct 232847 TCTCGATGGTGTCAGAAGCTTCAACTTCTAAGGTGATGGTTTTACCAGTCAATGTCTTAA 232906 Query 43171 CAAAGATTTGCATT 43184 |||| ||||||||| Sbjct 232907 CAAATATTTGCATT 232920 >seq796 Length=639285 Score = 93.3 bits (102), Expect = 5e-14 Identities = 73/85 (86%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 60057 AAAAATTTTCTC-CTC-GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 ||||||| || ||| ||| ||||||||||||| ||||||||||||||||||||| || Sbjct 464605 AAAAATTAAGTCTCTCTGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 464664 Query 60115 ACTCACCACTATACTACCGAGGATT 60139 ||| |||||||||||||| | |||| Sbjct 464665 ACTTACCACTATACTACCAAAGATT 464689 Score = 89.7 bits (98), Expect = 6e-13 Identities = 75/88 (85%), Gaps = 3/88 (3%) Strand=Plus/Plus Query 60057 AAAAATTTTCTC-CTC-GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 ||||||| || ||| ||| ||||||||||||| ||||||||||||||||||||| || Sbjct 457340 AAAAATTAAGTCTCTCTGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 457399 Query 60115 ACTCACCACTATACTACC-GAGGATTGA 60141 ||| |||||||||||||| ||| |||| Sbjct 457400 ACTTACCACTATACTACCAGAGATTTGA 457427 >seq1777 Length=2054514 Score = 89.7 bits (98), Expect = 6e-13 Identities = 72/86 (84%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 60057 AAAAATTTT--CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114 |||||| || |||| |||| ||||||||||||| ||||||||||||||||||||| || Sbjct 6958 AAAAATGTTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 7017 Query 60115 ACTCACCACTATACTACCGAGGATTG 60140 | | ||| ||||| |||||||| || Sbjct 7018 AATGTCCATTATACGACCGAGGAATG 7043 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| |||| ||||||||||||| | ||||||||||||||||||| ||| | ||| Sbjct 1303916 TTCTCCCCGGCGGGGAATCGAACCCCGATCTCCCGCGTGACAGGCGGGGATAATGGCCAT 1303975 Query 60124 TATACTACCGAGGA 60137 ||||| |||||||| Sbjct 1303976 TATACGACCGAGGA 1303989 >seq802 Length=412720 Score = 89.7 bits (98), Expect = 6e-13 Identities = 73/88 (83%), Gaps = 3/88 (3%) Strand=Plus/Plus Query 60053 TATGAAAAA---TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCG 60109 ||| ||||| ||| |||| |||| ||||||||||||| |||||||||||||||||||| Sbjct 43261 TATAAAAAAATGTTTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCG 43320 Query 60110 GACATACTCACCACTATACTACCGAGGA 60137 | ||| | ||| ||||| |||||||| Sbjct 43321 GGGATAATGTCCATTATACGACCGAGGA 43348 >seq719 Length=2540061 Score = 87.8 bits (96), Expect = 2e-12 Identities = 56/61 (92%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 60072 GGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTAC 60131 ||| ||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||| Sbjct 1588656 GGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTAC 1588715 Query 60132 C 60132 | Sbjct 1588716 C 1588716 >seq577 Length=3461113 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| |||| ||||||||||||| ||||||||||||||||||||| ||| | ||| | Sbjct 1010187 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAATGTCCATT 1010246 Query 60125 ATACTACCGAGGA 60137 |||| |||||||| Sbjct 1010247 ATACGACCGAGGA 1010259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571804776990320