Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microplitis_20demolitor_20[refseq_20GCF_5F000572035.2_202015-10-07] 1,794 sequences; 241,190,213 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq691 95.1 2e-14 seq1070 89.7 8e-13 seq757 86.0 9e-12 >seq691 Length=387001 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | ||| | || ||||| || | ||||||||||| || || || || ||| Sbjct 74539 CCACCACGAAGACGCAAGACCAAGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCAGAA 74598 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | || || | |||||| ||||| || || | | |||||||| |||||| Sbjct 74599 AGAGTTCTTCCGTCCTCAAGTTGTTTACCAGCGAAGATGAGACGCTGCTGATCTGGAGGA 74658 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||||||||| ||||| Sbjct 74659 ATTCCTTCTTTGTCTTG 74675 Score = 93.3 bits (102), Expect = 6e-14 Identities = 152/227 (67%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||||| ||||| | || ||||| | ||| || ||||| ||||| ||||| || Sbjct 74311 CCACCTCGAAGTCGGAGCACTAAATGAAGAGTTGACTCTTTCTGGATATTGTAATCAGAC 74370 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || | | ||| || | |||||| ||||| ||||| | | |||||||| |||||| Sbjct 74371 AGGGTACGTCCATCTTCAAGTTGTTTACCAGCGAAAATAAGACGCTGCTGATCTGGAGGA 74430 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 ||||||||||| || || ||||| ||| ||| ||| Sbjct 74431 ATTCCTTCTTTGTCCTGAATTTTAGCCTTGACGTTTTCGATCGTATCAGAAGCTTCAACT 74490 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || | ||||| ||||| || || || ||||||| || |||||||| Sbjct 74491 TCCAAGGTGATAGTTTTTCCAGTCAAAGTTTTAACAAAAATTTGCAT 74537 Score = 89.7 bits (98), Expect = 8e-13 Identities = 151/227 (67%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | ||| | || ||||| || | || |||||||| || || || || ||| Sbjct 73171 CCACCACGAAGACGCAACACCAAGTGAAGTGTTGATTCTTTCTGAATGTTGTAGTCAGAA 73230 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||||| | || || | |||||| ||||||||||| | | |||||||| || ||| Sbjct 73231 AGAGTTCGTCCGTCTTCGAGTTGTTTACCAGCAAAAATGAGACGCTGCTGATCTGGCGGA 73290 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 ||||||||||| || || ||||| || ||| ||| Sbjct 73291 ATTCCTTCTTTGTCCTGGATTTTAGCTTTGACGTTTTCAATGGTATCGGATGCTTCAACT 73350 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || || ||||| |||||||| || | ||||||| ||| || ||||| Sbjct 73351 TCGAGAGTGATCGTTTTACCCGTAAGAGTTTTAACGAAGATCTGCAT 73397 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | ||| | ||||| ||||| | || || || || || || ||||||||| Sbjct 73855 CCACCACGAAGACGCAATACTAAATGAAGCGTTGACTCCTTTTGGATGTTGTAATCTGAA 73914 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | || || | |||||| |||||||| || | | |||||||| || ||| Sbjct 73915 AGAGTTCTACCGTCTTCAAGTTGTTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGA 73974 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||||||||| || || Sbjct 73975 ATTCCTTCTTTGTCCTG 73991 >seq1070 Length=378361 Score = 89.7 bits (98), Expect = 8e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 || || || || |||||||| | | ||| || || ||||||||||||||||||| | | Sbjct 194596 ATGTTGTAGTCAGAAAGAGTACGTCCATCTTCCAACTGTTTTCCAGCAAAAATCAGACGT 194537 Query 146156 TGCTGATCCGGAGGAATTCCTTCTTTATCTTG 146187 |||||||| ||||||||||| || |||||||| Sbjct 194536 TGCTGATCTGGAGGAATTCCCTCCTTATCTTG 194505 >seq757 Length=1375584 Score = 86.0 bits (94), Expect = 9e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 73338 AAGAAGGTAAGAAAGTATTAATTCATTGTTATGCTGGTATATCAAGATCTGCAAGTATAG 73397 |||| | ||| ||| | ||| ||||||||||| |||| |||||||||| || | ||| Sbjct 485667 AAGATGATAAAAAAATTTTAGTTCATTGTTATTTTGGTGTATCAAGATCAGCGACATTAG 485726 Query 73398 TTATTAATTATTTTATGAATAAATATAATATAAATTATGACGAAGCTGAAAAAATAGTTA 73457 | ||| |||| ||||||| |||||||| || | |||||| | ||| | || |||||| Sbjct 485727 TAATTGCTTATATTATGAAAAAATATAAAATTACTTATGAGAATGCTTATGAACTAGTTA 485786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743509726420480