Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microplitis_20demolitor_20[refseq_20GCF_5F000572035.2_202015-10-07] 1,794 sequences; 241,190,213 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq691 140 2e-28 seq628 100 2e-16 seq1070 87.8 1e-12 >seq691 Length=387001 Score = 140 bits (154), Expect = 2e-28 Identities = 161/214 (75%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || ||||||||||| || || || ||||| ||||||||||| ||| |||| ||||| Sbjct 73870 AATACTAAATGAAGCGTTGACTCCTTTTGGATGTTGTAATCTGAAAGAGTTCTACCGTCT 73929 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | |||||| ||||| | || | ||| || || || |||||||||||||||||| Sbjct 73930 TCAAGTTGTTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGAATTCCTTCTTTGTCC 73989 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTAT-TTTCTACATCTAAGGTAATGGT 15330 ||||| |||||| |||| ||||| || | || ||| || || | || || || Sbjct 73990 TGGATTTTAGCCTTTACGTTTTCAATGGTGTC-CGATGCTTCAACCTCGAGAGTGATAGT 74048 Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||||| || || |||||||| |||||||||||| Sbjct 74049 TTTACCAGTGAGGGTTTTTACGAAAATTTGCATA 74082 Score = 127 bits (140), Expect = 1e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || |||| |||||| || || ||||| || ||||||||||| ||| |||| | || Sbjct 73414 AATACTAGATGAAGTGTTGACTCTTTCTGAATGTTGTAATCAGAAAGAGTTCTTCCATCC 73473 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | |||||| |||||| | || | |||||||||||| |||||| || || || || Sbjct 73474 TCGAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCTGGTGGAATACCCTCCTTATCT 73533 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 ||| ||| ||| || | || |||||||| | ||| || || ||||| || ||| Sbjct 73534 TGAATCTTGGCCTTGACGTTCTCGATGGTATCAGAAGCTTCGACCTCCAAGGTGATTGTT 73593 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| || ||||| || || || ||||||||| Sbjct 73594 TTACCGGTAAGAGTCTTCACGAAGATTTGCATA 73626 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||| | || | ||||||||||| || || ||||| || || |||||||| Sbjct 74311 CCACCTCGAAGTCGGAGCACTAAATGAAGAGTTGACTCTTTCTGGATATTGTAATCAGAC 74370 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | ||||| | |||||| |||||| | || | ||| || || || ||| Sbjct 74371 AGGGTACGTCCATCTTCAAGTTGTTTACCAGCGAAAATAAGACGCTGCTGATCTGGAGGA 74430 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 |||||||||||||| |||||| ||| || |||| || ||||| | ||| || Sbjct 74431 ATTCCTTCTTTGTCCTGAATTTTAGCCTTGACGTTTTCGATCGTATCAGAAGCTTCAACT 74490 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || ||||| || ||||| || |||| |||||| ||||||||||||||| Sbjct 74491 TCCAAGGTGATAGTTTTTCCAGTCAAAGTTTTAACAAAAATTTGCATA 74538 Score = 118 bits (130), Expect = 8e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 ||||||||||| || || || ||||| || ||||| ||||| ||| |||| | || Sbjct 73642 AAAACTAAATGGAGTGTTGACTCTTTCTGAATGTTATAATCTGAAAGAGTTCTTCCATCC 73701 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | |||||| |||||| | || | |||||||||||| |||||| || || || || Sbjct 73702 TCGAGTTGTTTACCAGCGAAGATAAGACGTTGTTGGTCTGGTGGAATACCCTCCTTATCT 73761 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 ||| ||| || ||| |||| |||||||| ||| || || | ||| || ||| Sbjct 73762 TGAATCTTGGCTTTAACATTTTCAATGGTATCAGAGGCTTCGACTTCGAGGGTGATAGTT 73821 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || |||| || || |||||||| |||||| Sbjct 73822 TTTCCAGTCAATGTCTTGACAAAAATCTGCATA 73854 Score = 109 bits (120), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || || ||||| || || ||||| || |||||||| || ||| ||| ||||| Sbjct 73186 AACACCAAGTGAAGTGTTGATTCTTTCTGAATGTTGTAGTCAGAAAGAGTTCGTCCGTCT 73245 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | |||||| ||||| | || | ||| || || || ||||||||||||||||| Sbjct 73246 TCGAGTTGTTTACCAGCAAAAATGAGACGCTGCTGATCTGGCGGAATTCCTTCTTTGTCC 73305 Query 15272 CAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330 ||||| ||| || || |||| ||||||||| ||| || || | || || || Sbjct 73306 TGGATTTTAGCT-TTGACGTTTTCAATGGTATCGGATGCTTCAACTTCGAGAGTGATCGT 73364 Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||||| || |||||||| || || || |||||| Sbjct 73365 TTTACCCGTAAGAGTTTTAACGAAGATCTGCATA 73398 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || || ||||| || || |||||||| ||||| || || || | | | ||| Sbjct 74098 AAGACCAAGTGAAGTGTTGACTCTTTTTGGATGTTATAGTCAGAAAGGGTGCGTCCATCT 74157 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | |||||| |||||| | || | |||||||||||| ||| || ||||| || || Sbjct 74158 TCAAGTTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGTGGGATACCTTCCTTATCT 74217 Query 15272 CAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330 || || ||| |||||| |||| || ||||| | || || ||||| || || || Sbjct 74218 TGGATCTTAGCT-TTTACATTTTCGATAGTATCAGAAGCCTCAACTTCTAATGTTATCGT 74276 Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||| || || || ||||| || |||||||||||| Sbjct 74277 TTTTCCAGTAAGTGTTTTAACGAAAATTTGCATA 74310 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || || |||||||| || ||||| || |||||||| || ||| |||| |||| Sbjct 74554 AAGACCAAGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCAGAAAGAGTTCTTCCGTCC 74613 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | |||||| |||||| | || | ||| || || || ||||||||||||||||| Sbjct 74614 TCAAGTTGTTTACCAGCGAAGATGAGACGCTGCTGATCTGGAGGAATTCCTTCTTTGTCT 74673 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 ||| ||| |||||| |||| || || || ||||| || | || || || Sbjct 74674 TGAATCTTGGCCTTTACGTTTTCAATAGTGTCTGAGGCCTCTACTTCCAGAGTGATTGTC 74733 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || |||| || || ||||| || |||||| Sbjct 74734 TTTCCAGTCAATGTCTTGACAAAGATCTGCATA 74766 >seq628 Length=266871 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 || ||||| || || ||||| |||||||| || ||| | | | ||||| || || Sbjct 232717 TGGAGGGTTGACTCCTTTTGAATGTTGTAGTCTGAGAGAGTACGGCCATCTTCCAACTGC 232776 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT- 15279 || |||||| | ||||| | || ||||| || || || |||||||| ||| || Sbjct 232777 TTACCAGCGAAGATCAATCTCTGCTGGTCTGGAGGGATCCCCTCTTTGTCTTGAATCTTA 232836 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 ||| ||||| | || ||||| || | ||| || |||||||| ||||||||||| || Sbjct 232837 GCT-TTTACGTTCTCGATGGTGTCAGAAGCTTCAACTTCTAAGGTGATGGTTTTACCAGT 232895 Query 15340 CAGAGTTTTTACAAAAATTTGCAT 15363 || || || ||||| |||||||| Sbjct 232896 CAATGTCTTAACAAATATTTGCAT 232919 >seq1070 Length=378361 Score = 87.8 bits (96), Expect = 1e-12 Identities = 139/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 15171 AATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGT 15230 || |||| || |||||||| || ||| | | | ||||| || ||||| ||||| Sbjct 194607 AACCTTTCTGGATGTTGTAGTCAGAAAGAGTACGTCCATCTTCCAACTGTTTTCCAGCAA 194548 Query 15231 ATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT-GCTCTTTACA 15289 | |||| |||||| || || |||||||| || || || ||||| ||| || ||| Sbjct 194547 AAATCAGACGTTGCTGATCTGGAGGAATTCCCTCCTTATCTTGGATTTTAGCT-TTGACA 194489 Query 15290 ATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTT 15349 |||| || || || | || || || | ||||||||||||||| |||| ||||| Sbjct 194488 TTTTCGATTGTGTCAGAAGCCTCGACTTCAAGGGTAATGGTTTTACCCGTCAACGTTTTC 194429 Query 15350 ACAAAAATTTGCATATT 15366 || ||||| ||||| || Sbjct 194428 ACGAAAATCTGCATTTT 194412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362171281178154