Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microplitis_20demolitor_20[refseq_20GCF_5F000572035.2_202015-10-07] 1,794 sequences; 241,190,213 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq640 159 4e-34 seq639 140 4e-28 >seq640 Length=4018341 Score = 159 bits (176), Expect = 4e-34 Identities = 468/715 (65%), Gaps = 22/715 (3%) Strand=Plus/Minus Query 164395 TGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGA 164454 ||| |||| | |||||||| ||||||| | ||| ||| || ||||||| | Sbjct 3067110 TGGGATTTCGCTAAAATGGGAATAGGTGGTTTGGATAAAGAGTTCAGCGCTATTTTCCGT 3067051 Query 164455 CGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACAT 164514 || ||||||||||| ||| | |||| | || || || | | | || || | ||| Sbjct 3067050 CGTGCATTTGCTTCGAGAGTATTTCCAACTGATATTATGACGCAGCTGGGATGCAGACAC 3066991 Query 164515 ATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGC 164574 | || || ||||| | | ||||| |||||| || ||||| | |||||||| Sbjct 3066990 GTTAAGGGTATTTTGCTCTACGGACCACCTGGTACGGGAAAAACTCTTATGGCTCGTCAG 3066931 Query 164575 ATTGCTCAAGCTTTTAAAT-CGCGACCCGTTAAAATTGTTAATGGTCCTGA-ATTATTGA 164632 |||| | | | || ||| || || |||||| || ||||| || | ||| ||| Sbjct 3066930 ATTGGT-ACCATGTTGAATGCGAGAGAACCTAAAATCGTCAATGGCCCGCAGATTCTTG- 3066873 Query 164633 ACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAG 164692 |||| ||||| || || ||||| || || || | |||||| || |||||||||| Sbjct 3066872 ACAAGTATGTGGGAGAAAGTGAAGCCAACGTCAGGAGATTGTTTGCCGAAGCTGAAGAAG 3066813 Query 164693 AACAAAAGAAAGCAGGTTTAGCTAGTAAATTACATGTTATTGTTTTTGATGAGATAGATG 164752 | |||||||| ||| | ||| | ||| ||||| |||||||||| || || | Sbjct 3066812 AGGAAAAGAAACTGGGTCCAAACAGTGGTCTTCATATTATTATTTTTGATGAAATCGACG 3066753 Query 164753 CTCTTTGCAAAAAACGTGG---------TGATAATATT---ATTCATGATGCAGTGGTTA 164800 || | || || ||||| || ||| | | | ||||| | || || | Sbjct 3066752 CTATCTGTAAGTCTCGTGGTAGTGTCGCTGGTAACACTGGCGTCCATGACACTGTCGTGA 3066693 Query 164801 ATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGTA 164860 | || ||||| || ||||||||||||||||| | ||||||||| | | | |||| Sbjct 3066692 ACCAATTGCTGTCCAAAATAGATGGTGTAGAGCAGCTCAATAATATTCTCGTGATTGGTA 3066633 Query 164861 TGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTGA 164920 |||| ||||||| || | ||||| || ||||| |||| ||||| ||||| || || Sbjct 3066632 TGACTAACCGACGAGACATGATTGACGAAGCTTTGCTACGTCCTGGACGATTGGAGTTAC 3066573 Query 164921 AAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCATGTGG 164980 |||| || || | || || || | ||| | | ||||| ||||| |||| Sbjct 3066572 AAATGGAGATCAGTTTGCCAGATGAGACTGGAAGATTCCAAATCTTAAATATTCACACAT 3066513 Query 164981 CTAAAATG---AAATCCTGTGATATATTATCTCCCGATGTAGATTTAAATAAAATAGCTG 165037 | | |||| || | ||| | | |||| ||||| || || || | | || | Sbjct 3066512 CGAGAATGCGTGAACAC---AATAAAATTGCTCCGGATGTCGACTTGAAAGAGCTTGCAG 3066456 Query 165038 CCGAAACTAAAAATTATAGTGGTGCTGAATTAGAGGGATTAGTAAGAGCCGCTCA 165092 | || ||||||| ||| || || ||||| || || || |||||||| ||||| Sbjct 3066455 CGCTTACGAAAAATTTTAGCGGCGCCGAATTGGAAGGTTTGGTAAGAGCTGCTCA 3066401 >seq639 Length=341822 Score = 140 bits (154), Expect = 4e-28 Identities = 173/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 7175 TATAATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTT 7234 |||| | |||||||||||||||||||||||| ||||| || || |||||||||||||||| Sbjct 4873 TATACTCAGCTCCAAAATGTCTCCATTGAAATCCATAGATGGGTCCTAAATCACCTTCTT 4814 Query 7235 CACGATGATTAAATCCTAATCGATTTAAATTAGATTTTGATCCATAAGCATCCCAAATAT 7294 | | || | |||||| | || |||| | |||| | | ||||||||||||| Sbjct 4813 CTCTATCCTGAAATCCATAAGTATCTAAAAATTCTCTTGAACTGTTTGCATCCCAAATAT 4754 Query 7295 GTACAGAtttttttGATAAATTTAAAGAATTTGTAGATCCTTTAAGGAACCATAAAAGTT 7354 | ||| ||| | || | || || |||||| ||||| ||| ||||||| |||| Sbjct 4753 GAACACCTTTCTCAGAAAGCTTATGAGCATTTGTCGATCCACTAATAAACCATAGTAGTT 4694 Query 7355 CTTCTACTATTCCACGCCAAAACATTCTTTTTGTAGTGAATAAAGGGAATGTACTTA 7411 |||| |||| || ||| || | | ||||||||| | ||| || ||||||| || Sbjct 4693 CTTCAACTACACCTTTCCAGAATACTGATTTTGTAGTTAGTAATGGAAATGTACCTA 4637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595858637570400