Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microplitis_20demolitor_20[refseq_20GCF_5F000572035.2_202015-10-07] 1,794 sequences; 241,190,213 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq650 260 8e-65 seq719 104 1e-17 >seq650 Length=3604084 Score = 260 bits (288), Expect = 8e-65 Identities = 430/613 (70%), Gaps = 8/613 (1%) Strand=Plus/Minus Query 3529 AGCtttttttATCAACAGAGGTGCTGTAAAAATGGCAAACATTGATCATGCAACGAATTT 3588 |||||||||| |||| | | |||||| ||||||||||| ||||| | ||| ||||| Sbjct 2831819 AGCTTTTTTTCTCAATCGCGCTGCTGTTAAAATGGCAAATATTGACAAAGCATGTAATTT 2831760 Query 3589 CGTATTTACACGATTGAATGATGGATCA-AATGAATTGATATATTTTGCTGACGTATGCG 3647 | || || | || ||| || | | ||||| | ||||||||||| || || | Sbjct 2831759 TATGTTCACTC-ATCGAAATATTGGTAGCAATGAGACACTTTATTTTGCTGATGTCTGTG 2831701 Query 3648 CTGGTCCAGGTGGTTTCAGTGAATATATGTTATGGAGAAAGAAATGGAATATCAAAGGTT 3707 ||||||| ||||| ||||| || || | || ||||||| || ||| ||||||| Sbjct 2831700 CTGGTCCTGGTGGCTTCAGCGAGTACGTTTTGTGGAGAACTAAGTGGGGAGCAAAAGGTT 2831641 Query 3708 ATGGTATGACGTTACGCGaaaaaaaTGATTTTCAACTGAACAGATTTT-ACGATAACTTT 3766 |||| | ||| | || || |||||| ||| | || | ||||||| | | | | Sbjct 2831640 TTGGTTTTACGCTGCGTGATTCAAATGACTTTAAGCTAGA-AGATTTTTATGCTGCGTCA 2831582 Query 3767 TCGGAAACTTTACACCCGTATTATGGTCCGCTTAACGATGGTAATATCTACAATTCACAA 3826 | |||||||| || || | || ||||| | ||||||||| | || || || | Sbjct 2831581 CCTGAAACTTTTCATCCATTCTACGGTCCAAAGGAAGATGGTAATGTATATGATCCAGAT 2831522 Query 3827 AATCAGAAAGGTTTTTGTGAAATGATTATGAAAGATACCGAAGGAA--AAGGTGTACATT 3884 ||||| ||| ||| || ||||| | ||| ||| || ||||| | |||| Sbjct 2831521 AATCAACAAGCATTTAAACGTATCGTTATGCAGTCTAC--AAGAAATAAAGGTCTTCATT 2831464 Query 3885 TTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTAT 3944 |||||||||| || |||||||| || || || |||||||||||||| |||||||| | | Sbjct 2831463 TTATGATGGCCGATGGTGGGTTTTCAGTAGACGGTCAAGAAAATATACAAGAAATTCTCT 2831404 Query 3945 CGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTC 4004 | ||| | ||||| | ||||||||| | |||| ||||||| | || || |||| Sbjct 2831403 CAAAACAATTGTATCTCTGTCAATGTCTTGTTGCGCTGATGATTGTCCGTGAAGGCGGTC 2831344 Query 4005 ATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGA 4064 ||| ||||| |||||| || ||| ||||||| || ||||| || || ||||| ||||| | Sbjct 2831343 ATTTTGTTACCAAATTATTTGATTTATTTACTCCATTTAGCGCAGGATTAGTTTATTTAA 2831284 Query 4065 TGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCATCGCGACCGGCCAATT 4124 || | | | ||| || | ||||||| ||||||||| || | || |||| || || | Sbjct 2831283 TGCACCGGTGTTTCAAAAGAGTTTGTATCTTCAAACCAAATACCTCCAGACCAGCAAACT 2831224 Query 4125 CTGAAAGATATTT 4137 ||||| | || || Sbjct 2831223 CTGAACGTTACTT 2831211 >seq719 Length=2540061 Score = 104 bits (114), Expect = 1e-17 Identities = 120/162 (74%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 5914 CCAGAAAACCAGATATGTGCGGCTGCTCCAGGAGGTGGTAAAGACGCATGCCAAGGTGAT 5973 ||||| ||| || ||||| || ||||| ||||||||||||||| || ||||| ||| Sbjct 1384369 CCAGAGGGCCAAATTTGTGCAGCCTATCCAGAAGGTGGTAAAGACGCTTGTCAAGGAGAT 1384428 Query 5974 TCGGGTGGCCCGTTAGTTGTCGATAACCGCTTAGCTGGTATCGTGTCATGGGGTAATGGA 6033 || ||||| || || | || | || | ||||| || || || ||||| |||||| Sbjct 1384429 TCTGGTGGTCCTTTGACTATCCAAGGTCGTCTTGCTGGAATAGTATCCTGGGGGAATGGA 1384488 Query 6034 TGTGGTCGTACAGGATGGCCCGGAGCTTACACTGAAATCGCG 6075 |||| |||| |||| | || |||| |||||||||| | ||| Sbjct 1384489 TGTGCTCGTCCAGGGTATCCTGGAGTTTACACTGAAGTTGCG 1384530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276547553328382