Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microplitis_20demolitor_20[refseq_20GCF_5F000572035.2_202015-10-07] 1,794 sequences; 241,190,213 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq796 109 3e-19 seq1040 96.9 2e-15 seq719 95.1 6e-15 seq723 93.3 2e-14 >seq796 Length=639285 Score = 109 bits (120), Expect = 3e-19 Identities = 77/89 (87%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| || ||||| |||| |||||||||| ||||||||||||||||||||| Sbjct 134130 AAAAAAAAAAAAATTTGGCTCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCAC 134071 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||| ||| Sbjct 134070 GACGCTCTAACCAACTGAGCTAATGAGCC 134042 Score = 109 bits (120), Expect = 3e-19 Identities = 77/89 (87%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||| || ||||| |||| |||||||||| ||||||||||||||||||||| Sbjct 135212 AAAAAAAAAAAAATTTGGCTCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 135153 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||| ||| Sbjct 135152 GACGCTCTAACCAACTGAGCTAATGAGCC 135124 Score = 107 bits (118), Expect = 1e-18 Identities = 78/90 (87%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 || |||||| |||| |||| |||| |||||||||| |||||||||||||||||||| Sbjct 141786 AAAAAAAAAAAAAATCTGGCTCATGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCA 141727 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| |||||||||||||||| ||| Sbjct 141726 CGACGCTCTAACCAACTGAGCTAATGAGCC 141697 >seq1040 Length=1512509 Score = 96.9 bits (106), Expect = 2e-15 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || ||||||| || ||||| || |||||||||| ||||||||||||||||||||| Sbjct 990396 AACAAAAAAT-AATGTGGCCTGTGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 990454 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||| |||| Sbjct 990455 GACGCTCTAACCAACTGAGCTAACAGGCC 990483 Score = 91.5 bits (100), Expect = 8e-14 Identities = 72/87 (83%), Gaps = 4/87 (5%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||||| ||||| || |||||||||| |||||||||||||||||||||||| Sbjct 987207 AAAAAATC----TGGCCTGTGGGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 987262 Query 11504 GCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||| |||| ||||||||| ||||| Sbjct 987263 GCTCTAACCATCTGAGCTAACAGGCCG 987289 >seq719 Length=2540061 Score = 95.1 bits (104), Expect = 6e-15 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 3711 GCCACTTCGGTGTAAACGCCCGGCCAACCATTTCTACCACACCCATTCCCCCACGACACG 3770 || ||||| |||||||| || || | || | | |||| ||||||||||| || || Sbjct 1384529 GCAACTTCAGTGTAAACTCCAGGATACCCTGGACGAGCACATCCATTCCCCCAGGATACT 1384470 Query 3771 ATTCCAGCCAACCTATCGTTAACAACCATTGGTCCACCCGAATCCCCTTGACACGCGTCT 3830 |||||||| | | | | | | | || || ||||| ||||| |||||||| |||||| Sbjct 1384469 ATTCCAGCAAGACGACCTTGGATAGTCAAAGGACCACCAGAATCTCCTTGACAAGCGTCT 1384410 Query 3831 TTACCACCTCCTGGTGACGCCGCACATATTTG 3862 ||||||||| |||| | || ||||| ||||| Sbjct 1384409 TTACCACCTTCTGGATAGGCTGCACAAATTTG 1384378 >seq723 Length=2072414 Score = 93.3 bits (102), Expect = 2e-14 Identities = 76/92 (83%), Gaps = 2/92 (2%) Strand=Plus/Minus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 |||||||| || |||| ||| |||||||||| || ||||||||||||||||||| Sbjct 1381280 ATAAAAAA--AATCTGGCTTATGGGGGGATCGAACCCGCGGCCTTCGCGTTATTAGCACG 1381223 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCCGTCG 11533 ||||||| ||||||||||||||| |||| || Sbjct 1381222 ACGCTCTAACCAACTGAGCTAATAAGCCGACG 1381191 Score = 91.5 bits (100), Expect = 8e-14 Identities = 71/84 (85%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 || |||||| |||| ||| | || |||||||||| |||||||||||||||||||| Sbjct 1367067 AAAAAAAAAAAAAATCTGGTTCTTGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCA 1367008 Query 11500 CGACGCTCTRACCAACTGAGCTAA 11523 ||||||||| |||||||||||||| Sbjct 1367007 CGACGCTCTAACCAACTGAGCTAA 1366984 Lambda K H 0.636 0.409 0.916 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261485482658344