Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microplitis_20demolitor_20[refseq_20GCF_5F000572035.2_202015-10-07] 1,794 sequences; 241,190,213 total letters Query= NC_006642.1 Length=14286 Score E Sequences producing significant alignments: (Bits) Value seq571 251 7e-63 seq784 111 1e-20 seq634 111 1e-20 seq778 102 7e-18 seq1315 84.2 2e-12 seq804 80.6 2e-11 >seq571 Length=2263503 Score = 251 bits (278), Expect = 7e-63 Identities = 525/777 (68%), Gaps = 19/777 (2%) Strand=Plus/Minus Query 13209 ATTGCCAGCTTCATGAAGCCCGAGAATCAACCAAAAAACCGGTACTGGGACATTCCTTGC 13268 |||| || ||| | || || || ||| || |||||||| || || ||||| || Sbjct 1531905 ATTGACAACTTTACAAAACCAGAAAATGAAGGGAAAAACCGTTATCTCGATATTCCATGT 1531846 Query 13269 TGGGAGCATTCACGCGTTGTGCTAGATACTAAA---GGAGGATCGGACTACATCCACGCG 13325 ||||| ||||||| |||||| |||| | ||| || | | || ||||| || ||| Sbjct 1531845 TGGGACGATTCACGGGTTGTGATAGAGTCGAAAAACGGCGAGCCAGATTACATACATGCG 1531786 Query 13326 AATTGGATCGATGGCTTTGAAGAGCCGAAGAAGTTCATCGCCACTCAAGGTCCCTTTGCG 13385 || ||||| |||| || ||||| ||| ||||||||||| | || || || | Sbjct 1531785 AACTGGATAAATGGATTCGAAGAAAAGAAAAAGTTCATCGCTATGCAGGGACCTATGAAA 1531726 Query 13386 AACACCACTGCAGACTTCTGGAGGCTCGTGTGGCAGGAGCATTGTTATGTGATAGTGATG 13445 || ||| || ||||| |||| | | || ||||| | ||| | |||| ||||||||| Sbjct 1531725 AATACCGTAGCTGACTTTTGGAAGGTTGTATGGCAACAACATAGCCATGTCATAGTGATG 1531666 Query 13446 TTAACTCCAACTAAAGTTAGCGGTGAAGAAAAATGTTATCAGTATTGGTGTCCCAGCGAA 13505 ||||| | |||| | ||| | ||||||||| |||||||||||||||| ||| Sbjct 1531665 TTAACGAAGATCAAAGAAGGTGGTAACGAAAAATGTCATCAGTATTGGTGTCCTTATGAA 1531606 Query 13506 ---AATGGGTCACTGGACATGAACGGATTCCGCATCAAAACTCTGAAAGTCACAGTTCGG 13562 ||| || ||| | | | | || | ||| |||||| ||| |||||||||| | Sbjct 1531605 GACAATTTGT---TGGTTACGGAAGAATACACCATAAAAACTTTGAGAGTCACAGTTAGA 1531549 Query 13563 GCTAAATACGTCCGGACACTGATCGAAATCACGAATAAATCCTTGAAGACATCGAGGAAA 13622 | || || |||||||| | | ||||| || ||||| | || ||| | ||| Sbjct 1531548 CCAAACTATATCCGGACATTTCTAGAAATTACTGATAAAACTACCCAGCGATCACGAAAA 1531489 Query 13623 CTAAGTCACTTCCAGTGCAGCAATTGGTTTGAATACAACACTCCTTCCGACTTACCGTGG 13682 ||| ||||||||||||| ||||| ||| | | | || ||||| ||| ||||| Sbjct 1531488 ATAACTCACTTCCAGTGCCTTCATTGGCCAGAACATAGTATGCCATCCGATTTAGCGTGG 1531429 Query 13683 TTTGTGCAATTCATCAACATGATCGATAGAGTACGTCAAGTCTACATGAAGCTATTTAAT 13742 || | | ||||| || |||| | |||||||| ||| ||||||||| ||| | Sbjct 1531428 TTCATTGATTTCATAAAAATGACGAACAGAGTACGAAAAGCGTACATGAAGATATCC--T 1531371 Query 13743 CCGAAGGATGCGTTGC----TCT-GCCCGGTGGTGGTGCACTGCAGCACTGGAGTCGGCA 13797 | |||| | | | ||| |||| || | |||||||| | | |||| | || | Sbjct 1531370 CGGAAGATTTCAAAGAGTCTTCTAGCCCTATGATCGTGCACTGTAACTCTGGTATAGGAA 1531311 Query 13798 GAACTGGAACCTTCTGCGCAGTGGACATCTGCTTGAACCAACTCGTGAAAACGTCCGCAA 13857 ||||||| |||||||| || | |||||||||||||||||| | |||||||| || || Sbjct 1531310 GAACTGGGACCTTCTGTGCTGCGGACATCTGCTTGAACCAGTTGGTGAAAACTTCAAGAA 1531251 Query 13858 TTTGTGTACCCCAAGTGGTTTTTAATGTGCGCGAGCAACGTTATGCTGGTGTTATGAATT 13917 ||| | |||| || ||| | | | || |||||| | | | ||| |||| | | Sbjct 1531250 TTTCTATACCGGAAACAGTTCTAAGAATCCGTGAGCAAAGACACTCGGGTATTATAAGTA 1531191 Query 13918 TCAACCAGTACTCGTTCATTTATGAAGTGCTGCATTACTTTTTAAGT---GTGCAAA 13971 | | || || ||||||| || |||||| | || ||||||| | ||||||| Sbjct 1531190 TGAGGCACTATATGTTCATTCATCGAGTGCTAGAGTATTTTTTAACTGCAGTGCAAA 1531134 Score = 78.8 bits (86), Expect = 8e-11 Identities = 134/192 (70%), Gaps = 7/192 (4%) Strand=Plus/Minus Query 13307 ATCGGACTACATCCACGCGAATTGGATCGATGGCTTTGAAGAGCCGAAGAAGTTCATCGC 13366 |||| | || || ||||| |||| |||| ||||||||||| || || || ||| Sbjct 1530363 ATCGAATTATATTCACGCAAATTACGTCGACGGCTTTGAAGATGATAAAAAATTTATCAT 1530304 Query 13367 CACTCAAGGTCCCTTTGCGAACACCACTGCA--GACTTCTGGAGGCTCGTGTGGCAGGAG 13424 ||||||||| || | | | | || |||| || || |||| | || |||||| | Sbjct 1530303 CACTCAAGGACCAATGGAGGAAACT--TGCAACGATTTTTGGAAGGCAGTTTGGCAGAAT 1530246 Query 13425 CATTGTTATGTGATAGTGATGTTAACTCCAACTAAAG---TTAGCGGTGAAGAAAAATGT 13481 |||||| | | ||||||||||||||||| || |||| | || |||||| || Sbjct 1530245 AATTGTTCTATTATAGTGATGTTAACTCCGACAAAAGGAACGAATGGAGAAGAACTCTGC 1530186 Query 13482 TATCAGTATTGG 13493 |||||||| ||| Sbjct 1530185 TATCAGTACTGG 1530174 >seq784 Length=600133 Score = 111 bits (122), Expect = 1e-20 Identities = 102/134 (76%), Gaps = 1/134 (1%) Strand=Plus/Plus Query 3632 TGTAAAGAATGCCTATTAAAGAAATAATACGTAGAAATACTTTTGATATGCATCTTAAAN 3691 ||||||||||| ||| ||| |||||||||||||||||||||||| ||||||||||||| Sbjct 264391 TGTAAAGAATGTCTAAAAAA-AAATAATACGTAGAAATACTTTTGTTATGCATCTTAAAA 264449 Query 3692 NNNNNNNNNNNNNNNNNNAATACCATTTTTGCGGAAATTTTCGATAAATTTACTCATTAA 3751 |||| ||||||| |||||||| ||| |||||||| |||||| Sbjct 264450 TTAATTTTTAAATTAATTAATAATATTTTTGAGGAAATTTCCGAAAAATTTACGCATTAA 264509 Query 3752 AAAATTATAAACAT 3765 | |||||| ||||| Sbjct 264510 ATAATTATTAACAT 264523 >seq634 Length=4749757 Score = 111 bits (122), Expect = 1e-20 Identities = 102/134 (76%), Gaps = 1/134 (1%) Strand=Plus/Minus Query 3632 TGTAAAGAATGCCTATTAAAGAAATAATACGTAGAAATACTTTTGATATGCATCTTAAAN 3691 ||||||||||| ||| ||| |||||||||||||||||||||||| ||||||||||||| Sbjct 336814 TGTAAAGAATGTCTAAAAAA-AAATAATACGTAGAAATACTTTTGTTATGCATCTTAAAA 336756 Query 3692 NNNNNNNNNNNNNNNNNNAATACCATTTTTGCGGAAATTTTCGATAAATTTACTCATTAA 3751 |||| ||||||| |||||||| ||| |||||||| |||||| Sbjct 336755 TTAATTTTTAAATTAATTAATAATATTTTTGAGGAAATTTCCGAAAAATTTACGCATTAA 336696 Query 3752 AAAATTATAAACAT 3765 | |||||| ||||| Sbjct 336695 ATAATTATTAACAT 336682 >seq778 Length=699350 Score = 102 bits (112), Expect = 7e-18 Identities = 100/134 (75%), Gaps = 1/134 (1%) Strand=Plus/Minus Query 3632 TGTAAAGAATGCCTATTAAAGAAATAATACGTAGAAATACTTTTGATATGCATCTTAAAN 3691 ||||||||||| ||| ||| |||||||||||||||||||||||| ||||||||||||| Sbjct 107407 TGTAAAGAATGTCTAAAAAA-AAATAATACGTAGAAATACTTTTGTTATGCATCTTAAAA 107349 Query 3692 NNNNNNNNNNNNNNNNNNAATACCATTTTTGCGGAAATTTTCGATAAATTTACTCATTAA 3751 ||| ||||||| |||||||| ||| |||||| | |||||| Sbjct 107348 TTACTTTTTAAATTAATTAATTATATTTTTGAGGAAATTTCCGAAAAATTTTCGCATTAA 107289 Query 3752 AAAATTATAAACAT 3765 | |||||| ||||| Sbjct 107288 ATAATTATTAACAT 107275 >seq1315 Length=51241 Score = 84.2 bits (92), Expect = 2e-12 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 3632 TGTAAAGAATGCCTATTAAAGAAATAATACGTAGAAATACTTTTGATATGCATCTTAAA 3690 ||||||||||| ||| ||| |||||||||||||||||||||||| ||||||||||||| Sbjct 51178 TGTAAAGAATGTCTAAAAAAAAAATAATACGTAGAAATACTTTTGTTATGCATCTTAAA 51236 >seq804 Length=730639 Score = 80.6 bits (88), Expect = 2e-11 Identities = 74/94 (79%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 8894 ACAGAAAAAGTAATTCGGACAGCCCCGGCCGGGAATCGAACCTGGATCTTTTGGTTACGC 8953 || || ||| |||||| | |||| | || ||| || ||||||||||||| |||||||| Sbjct 45035 ACTGATAAAATAATTCAAATGGCCCAGACCAGGACTCAAACCTGGATCTTTGGGTTACGC 44976 Query 8954 ACCAAGAGCTCTTCCAGTTAAGCTATCTAAGACA 8987 |||| ||||| || ||||||||||| ||||| Sbjct 44975 GCCAAAGGCTCTACCTGTTAAGCTATCCGAGACA 44942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 45595854179878