Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microplitis_20demolitor_20[refseq_20GCF_5F000572035.2_202015-10-07] 1,794 sequences; 241,190,213 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq691 140 3e-28 seq628 127 2e-24 seq699 82.4 7e-11 >seq691 Length=387001 Score = 140 bits (154), Expect = 3e-28 Identities = 162/216 (75%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || |||||||| || ||| | ||||| | ||||| || | ||| Sbjct 74537 ATGCAAATTTTTGTTAAAACTTTGACTGGAAAAACTATCACCTTGGAAGTTGAAGCTTCT 74478 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || ||||| |||| | || |||| ||| ||||||||||| ||||| || || Sbjct 74477 GATACGATCGAAAACGTCA---AGGCTAAAATTCAG-GACAAAGAAGGAATTCCTCCAGA 74422 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||||| ||||||| || || |||||| | ||||||| || || || ||||| Sbjct 74421 TCAGCAGCGTCTTATTTTCGCTGGTAAACAACTTGAAGATGGACGTACCCTGTCTGATTA 74362 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||| || ||||| || || || ||||||||||| Sbjct 74361 CAATATCCAGAAAGAGTCAACTCTTCATTTAGTGCT 74326 Score = 129 bits (142), Expect = 5e-25 Identities = 156/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||||||||| || ||| ||||||| ||||||| || | ||| Sbjct 73169 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAAACCATCACCCTCGAAGTTGAAGCATCT 73110 Query 25059 GACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | | |||| || | ||| |||||||| ||||||||||||||||| Sbjct 73109 GACACCATTGAAAACGTTAAAGCCAAGATTCAG-GACAAAGAGGGGATTCCACCTGACCA 73051 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || || || || || | ||||||| |||||| | || ||||| Sbjct 73050 GCAGCGTCTGATCTTCGCAGGTAAGCAGCTTGAAGATGGTCGCACCCTCTCGGACTACAA 72991 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGT 25207 || || |||||||| || || || || || Sbjct 72990 CATCCAGAAAGAATCTACCCTTCACTTGGT 72961 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || ||||| || | || |||||| | ||||| |||| || || | || Sbjct 74081 ATGCAAATTTTCGTAAAAACCCTCACTGGTAAAACTATCACTCTCGAGGTTGAAGCATCG 74022 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| |||||| ||||||||||| |||||||| || || Sbjct 74021 GACACCATTGAAAACGTAAAGGCTAAAATCCAGGACAAAGAAGGAATTCCACCAGATCAG 73962 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| || |||||| | ||||| | | | ||| | |||||||| Sbjct 73961 CAGCGTCTCATCTTTGCTGGTAAACAACTTGAAGACGGTAGAACTCTTTCAGATTACAAC 73902 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 || ||||| || || ||||| |||||||| Sbjct 73901 ATCCAAAAGGAGTCAACGCTTCATTTAGT 73873 Score = 105 bits (116), Expect = 6e-18 Identities = 153/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || ||| | || |||||| | ||||| ||||||| || | || Sbjct 73397 ATGCAGATCTTCGTTAAAACTCTTACGGGTAAAACGATCACTCTCGAAGTTGAAGCATCC 73338 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || || || || |||| |||| |||| || ||||||||||| ||||| || || Sbjct 73337 GATACCATTGAAAACGTCA---AAGCTAAAATCCAG-GACAAAGAAGGAATTCCGCCAGA 73282 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||||| | |||||||| || |||||| | ||||| | || ||| | || || Sbjct 73281 TCAGCAGCGTCTCATTTTTGCTGGTAAACAACTCGAAGACGGACGAACTCTTTCTGACTA 73222 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTG 25208 ||| ||||| |||||||| || || || || ||| Sbjct 73221 CAACATTCAGAAAGAATCAACACTTCACTTGGTG 73188 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| ||||| || || | ||||| | ||||| ||| | || Sbjct 74765 ATGCAGATCTTTGTCAAGACATTGACTGGAAAGACAATCACTCTGGAAGTAGAGGCCTCA 74706 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || | ||| | || | ||| ||||||||||| ||||| || || || Sbjct 74705 GACACTATTGAAAACGTAAAGGCCAAGATTCAA-GACAAAGAAGGAATTCCTCCAGATCA 74647 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || || || |||||| | || || | | ||| | || ||||| Sbjct 74646 GCAGCGTCTCATCTTCGCTGGTAAACAACTTGAGGACGGAAGAACTCTTTCTGACTACAA 74587 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGT 25207 || || |||||||| || || || || || Sbjct 74586 CATCCAGAAAGAATCTACCCTTCACTTGGT 74557 >seq628 Length=266871 Score = 127 bits (140), Expect = 2e-24 Identities = 170/234 (73%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||||||||| ||||| ||||| |||||| ||||||| | ||||| || | || Sbjct 232920 AATGCAAATATTTGTTAAGACATTGACTGGTAAAACCATCACCTTAGAAGTTGAAGCTTC 232861 Query 25058 TGACACTATCGAG-TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||| |||||| | |||| || | ||| |||||||| ||||| || || |||| Sbjct 232860 TGACACCATCGAGAACGTAAAAGCTAAGATTCA-AGACAAAGAGGGGATCCCTCCAGACC 232802 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||| | | || || || || || || || ||||||| || ||| | || |||| Sbjct 232801 AGCAGAGATTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGTACTCTCTCAGACTACA 232742 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATT 25230 | |||||||| || || || || || | || || | || | |||||||||| Sbjct 232741 ACATTCAAAAGGAGTCAACCCTCCACCTCGTACTTCGTCTCCGTGGAGGAAATT 232688 Score = 109 bits (120), Expect = 5e-19 Identities = 169/239 (71%), Gaps = 8/239 (3%) Strand=Plus/Minus Query 24993 GGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAG 25052 |||| |||||| || ||||| || |||||||| || || | || || | ||||| ||| Sbjct 233153 GGAAAAATGCAGATCTTTGTTAAAACTTTGACGGGGAAGACAATTACTTTGGAAGTTGAG 233094 Query 25053 TCGTCTGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCC 25108 | ||||||||||| || |||| |||| || | ||| ||||| || ||||| || Sbjct 233093 GCTTCTGACACTATTGAAAATGTCA---AAGCTAAGATTCA-AGACAAGGAGGGGATCCC 233038 Query 25109 ACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGG 25168 || ||||| ||| | | || || || || || || || ||||||| || || | Sbjct 233037 TCCAGACCAGCAGAGATTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGAACATTATC 232978 Query 25169 CGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || |||||||| || || |||||||| |||||| | || || | || | ||||||| Sbjct 232977 AGACTACAATATCCAGAAGGAATCCACACTACATCTCGTACTTCGTCTCCGTGGAGGAA 232919 >seq699 Length=3616336 Score = 82.4 bits (90), Expect = 7e-11 Identities = 170/251 (68%), Gaps = 4/251 (2%) Strand=Plus/Minus Query 50988 AAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAATTTTGCGTTC 51047 |||||| | || || || ||| ||||| ||||| ||| | ||||| | | | || Sbjct 2675182 AAACTTCCTCTCGCAACCTTTGTAATTCATGTACCTAATTTTACCAAACACTGATCTCTC 2675123 Query 51048 TTTGAACGGCCT--GTCGTGCACACCGCAAATTGACCACATACAACCCACATAATTGTTA 51105 || | ||| |||||| | |||||| || |||||||| || || || ||| || Sbjct 2675122 CTTCCAT--CCTTGGTCGTGGATACCGCAGATGGACCACATGCACCCGACGTAACCATTG 2675065 Query 51106 GGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATGCCATG 51165 ||||| || || |||| |||||| | || || ||| | || || || ||| || Sbjct 2675064 GGATCACGTCCGTCCATGCTGTACTTGTCATTGAGATAAATCGCCCAAGCCAGAGCGTCT 2675005 Query 51166 TCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAACCGTGC 51225 || | || ||||| || | ||| ||||||||||| ||||| | || | | || ||| Sbjct 2675004 TCCGGTGACGGAGTCCACTCTAAAATCTTCTTGGCCCAATACATCCTCAAGAACCCATGC 2674945 Query 51226 ATCTTGCCCTC 51236 ||||| || || Sbjct 2674944 ATCTTTCCTTC 2674934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433318525554110