Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microplitis_20demolitor_20[refseq_20GCF_5F000572035.2_202015-10-07] 1,794 sequences; 241,190,213 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq591 127 2e-24 seq628 100 3e-16 seq691 96.9 4e-15 >seq591 Length=3472834 Score = 127 bits (140), Expect = 2e-24 Identities = 278/411 (68%), Gaps = 8/411 (2%) Strand=Plus/Plus Query 14542 ACGGAGCCTCGCACACGCAAACCTTTTTGCGGAGGACTGGTGTTGACAGACACCGATAGA 14601 || || || || |||||||| || ||| || || | || |||| || ||| ||| Sbjct 2519406 ACAGAACCACGTACACGCAAGCCATTTAATGGTGGTATAGTTTTGATCGATACCCC-AGA 2519464 Query 14602 TTC-GATGCATACAACGATTACGTGATATCAGCCACGTACTTTGACGGAAAAAAGGTAAA 14660 || ||| ||| || ||||| | |||| || ||||||||| | ||||| |||| Sbjct 2519465 TTTTGATAAATATAATGATTATATATTATCCGCAACGTACTTTAATTATAAAAAAATAAA 2519524 Query 14661 TTACAATAGTGGTTTATTTTATTATGTACTCTGGAAA--TTGTG-TAGTGACAAAGAGTG 14717 ||||||| |||||||||||||||||| | | ||| ||||| ||| ||| | || Sbjct 2519525 CTACAATATTGGTTTATTTTATTATGTTTTGTATAAAATTTGTGAAAGT---AAACAATG 2519581 Query 14718 GATGGATAAGAATGTACTTGATCAGTTTTTGAAATACGTCAAGCGTCGCATCGAGACTAC 14777 ||||||||| ||||| ||||||| || ||||| || | | ||||| ||| || Sbjct 2519582 GATGGATAAAAATGTTATTGATCAACTTAAAAAATATGTTATAAGACGCATTAAGATGAC 2519641 Query 14778 CACGTGCAAGCTTAGTCTTTCTTCGCTTCCCATGGACCCACAAATGAATACGTCACTATT 14837 || || || | | | || ||| | || | ||||| || | || ||| || Sbjct 2519642 AACATGTAAAATAGGATTATCATCGTTACCACTTGACCCTCAGGAAATCACATCATTACC 2519701 Query 14838 GACCGCTCTGTGGTATTGTGTCGACTTGTCATCTGAAATATTCAAAAATGACAAGATTAA 14897 ||| || || ||||| || || || ||||| || | |||| ||| |||| | ||| Sbjct 2519702 GACTGCACTATGGTACTGCGTTGAATTGTCTTCATATCTATTTAAAGATGATCCCAATAA 2519761 Query 14898 CTTTGCATACGAAAGACTGCGACAGTATCATGGAATTGCTAAACACATGAT 14948 ||| |||||||| || || |||||||||| |||| | || ||||| Sbjct 2519762 TTTTATGCACGAAAGATTGAGAATGTATCATGGAGTTGCGCATCATATGAT 2519812 >seq628 Length=266871 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| | | ||| | || ||||| | ||| ||||| |||||||||||||| ||| Sbjct 232921 CCTCCACGGAGACGAAGTACGAGATGTAGTGTGGATTCCTTCTGGATATTGTAGTCTGAT 232980 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | || || | || || | |||||| || ||||| ||||| | ||||||||| | || Sbjct 232981 AATGTTCGGCCATCTTCCAACTGCTTACCAGCGAAGATCAATCTCTGCTGGTCTGGAGGG 233040 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||||||||| ||||| |||| | | | ||||| | || || Sbjct 233041 ATCCCCTCCTTGTCTTGAATCTTAGCTTTGACATTTTCAATAGTGTCAGAAGCCTCAACT 233100 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 |||| || || || || ||||||| |||||||||||||| |||||||| Sbjct 233101 TCCAAAGTAATTGTCTTCCCCGTCAAAGTTTTAACAAAGATCTGCATTTT 233150 Score = 96.9 bits (106), Expect = 4e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| || |||||||| || ||||| || | || || | |||||| || ||||| Sbjct 232728 CTCCTTTTGAATGTTGTAGTCTGAGAGAGTACGGCCATCTTCCAACTGCTTACCAGCGAA 232787 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| | ||||||||| | || | | ||| ||||| ||||| || | | Sbjct 232788 GATCAATCTCTGCTGGTCTGGAGGGATCCCCTCTTTGTCTTGAATCTTAGCTTTTACGTT 232847 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| | ||| || || | ||||||||||| || |||| || ||||| Sbjct 232848 CTCGATGGTGTCAGAAGCTTCAACTTCTAAGGTGATGGTTTTACCAGTCAATGTCTTAAC 232907 Query 46582 AAAGATTTGCATT 46594 ||| ||||||||| Sbjct 232908 AAATATTTGCATT 232920 >seq691 Length=387001 Score = 96.9 bits (106), Expect = 4e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 |||||| |||| || | ||| || || ||||| |||||||| || || ||||| | Sbjct 72954 ACGCAAGACCAAGTGAAGGGTAGATTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACC 73013 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || |||||||| || ||||| |||| ||||||||||| | || | | ||| || Sbjct 73014 ATCTTCAAGCTGCTTACCTGCGAAGATCAGACGCTGCTGGTCAGGTGGAATCCCCTCTTT 73073 Query 46498 GTCCATGATCTTCTTCTTGAGCG-TCGCCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||| ||| | || | | | ||||| | ||| || || | |||| Sbjct 73074 GTCCTGAATCTT-GGCTTTAACGTTTTCAATGGTGTCAGATGCTTCAACTTCGAGGGTGA 73132 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||| || |||| || || |||||||| ||||| Sbjct 73133 TGGTTTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 73169 Score = 93.3 bits (102), Expect = 5e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||| ||||||| || | ||| ||||| ||||| ||||||||||| || ||||| | Sbjct 74778 ACGTAACACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACC 74837 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || || || || || ||||| || || |||||||| || | || | | ||| || Sbjct 74838 ATCTTCCAGTTGTTTACCAGCGAAGATTAAACGCTGCTGATCCGGAGGAATTCCCTCTTT 74897 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| ||||| |||| | | | ||||| | ||| || || | || || Sbjct 74898 GTCCTGAATCTTGGCTTTGACATTTTCGATGGTGTCAGAAGCTTCAACCTCTAAAGTTAT 74957 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 ||||| ||||| || ||||| || ||||| |||||||| Sbjct 74958 TGTTTTTCCCGTAAGAGTTTTCACGAAGATCTGCATTTT 74996 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||||||||| || | ||| || || || || |||||||| || ||||| || | Sbjct 73182 ACGCAACACCAAGTGAAGTGTTGATTCTTTCTGAATGTTGTAGTCAGAAAGAGTTCGTCC 73241 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| ||||| || || || || || || | |||||||| || | ||| | | || || Sbjct 73242 GTCTTCGAGTTGTTTACCAGCAAAAATGAGACGCTGCTGATCTGGCGGAATTCCTTCTTT 73301 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| ||| || |||| | | | || ||| | ||| || || | ||||| Sbjct 73302 GTCCTGGATTTTAGCTTTGACGTTTTCAATGGTATCGGATGCTTCAACTTCGAGAGTGAT 73361 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| ||||| || |||||||| ||||| ||||| Sbjct 73362 CGTTTTACCCGTAAGAGTTTTAACGAAGATCTGCAT 73397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565225724528880