Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microplitis_20demolitor_20[refseq_20GCF_5F000572035.2_202015-10-07] 1,794 sequences; 241,190,213 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq722 172 1e-37 seq568 143 6e-29 seq810 89.7 1e-12 >seq722 Length=727517 Score = 172 bits (190), Expect = 1e-37 Identities = 332/488 (68%), Gaps = 9/488 (2%) Strand=Plus/Plus Query 110667 AAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATAT 110726 || || | ||| | ||| || |||| || | |||| ||||| | || || |||| Sbjct 511364 AATGGAGTTTCGAATGGTCTCATTCCTATTCTTCGAGTTTTCAATAATACAGCGCGATAT 511423 Query 110727 GTGAATCAAGGTGGTAAGAGAAA---TGGCTCATTTGCTATCTATCTCGAACCTTGGCAT 110783 || | ||||| ||||| | || ||| ||||||| || ||| | ||||| ||||| Sbjct 511424 GTCGACCAAGGCGGTAACAAAAGACCTGGAGCATTTGCAATTTATTTAGAACCCTGGCAC 511483 Query 110784 TCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCA 110843 | |||||||||||||| | || || |||||| || || || || | || Sbjct 511484 GCGGATATATTTGAATTTCTGGATCTGAAAAAAAATACCGGTAAAGATGAGCATCGCGCT 511543 Query 110844 CGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAAT 110903 ||||||||||| || ||| | ||||| |||||||||| |||| || |||| || Sbjct 511544 CGTGATTTATTCTACGCATTATGGATCCCAGATTTATTTATGAGCCGCACAAAAGATGAT 511603 Query 110904 GGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAA 110963 || | ||| | ||||| ||| | |||||||| || || | || ||| Sbjct 511604 GGAGTATGGAGCTTAATGTGCCCTAACTTATCTCCTGGACTCGACAATTGTTGGGGTAAA 511663 Query 110964 GAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG---CAAGTTTCGCAAACAAATT 111020 || ||||||| ||||| ||||||||||||||||| | | | || ||| || Sbjct 511664 GATTTTGAAGCACTTTATACTAAATATGAAAAAGAAGGTCGCTATGTACGT---CAAGTT 511720 Query 111021 CCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTAT 111080 || |||| ||| | ||| ||| | |||| |||||||||||||| ||||||||| Sbjct 511721 CCTGCTCGTGAATTGTGGACTGCTATCTTGAAATCTCAAGTTGAAACTGGTACTCCTTAT 511780 Query 111081 ATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAG 111140 || |||||||||| || |||||| ||||| |||||| |||||||| || || || Sbjct 511781 ATGGTGTATAAAGACCACTGTAATCGTAAATCAAATCAACAAAATTTAGGTACCATAAAA 511840 Query 111141 TCTAGTAA 111148 |||||| Sbjct 511841 AGTAGTAA 511848 Score = 172 bits (190), Expect = 1e-37 Identities = 332/488 (68%), Gaps = 9/488 (2%) Strand=Plus/Plus Query 110667 AAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATAT 110726 || || | ||| | ||| || |||| || | |||| ||||| | || || |||| Sbjct 522239 AATGGAGTTTCGAATGGTCTCATTCCTATTCTTCGAGTTTTCAATAATACAGCGCGATAT 522298 Query 110727 GTGAATCAAGGTGGTAAGAGAAA---TGGCTCATTTGCTATCTATCTCGAACCTTGGCAT 110783 || | ||||| ||||| | || ||| ||||||| || ||| | ||||| ||||| Sbjct 522299 GTCGACCAAGGCGGTAACAAAAGACCTGGAGCATTTGCAATTTATTTAGAACCCTGGCAC 522358 Query 110784 TCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAGCA 110843 | |||||||||||||| | || || |||||| || || || || | || Sbjct 522359 GCGGATATATTTGAATTTCTGGATCTGAAAAAAAATACCGGTAAAGATGAGCATCGCGCT 522418 Query 110844 CGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAAT 110903 ||||||||||| || ||| | ||||| |||||||||| |||| || |||| || Sbjct 522419 CGTGATTTATTCTACGCATTATGGATCCCAGATTTATTTATGAGCCGCACAAAAGATGAT 522478 Query 110904 GGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAA 110963 || | ||| | ||||| ||| | |||||||| || || | || ||| Sbjct 522479 GGAGTATGGAGCTTAATGTGCCCTAACTTATCTCCTGGACTCGACAATTGTTGGGGTAAA 522538 Query 110964 GAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG---CAAGTTTCGCAAACAAATT 111020 || ||||||| ||||| ||||||||||||||||| | | | || ||| || Sbjct 522539 GATTTTGAAGCACTTTATACTAAATATGAAAAAGAAGGTCGCTATGTACGT---CAAGTT 522595 Query 111021 CCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTAT 111080 || |||| ||| | ||| ||| | |||| |||||||||||||| ||||||||| Sbjct 522596 CCTGCTCGTGAATTGTGGACTGCTATCTTGAAATCTCAAGTTGAAACTGGTACTCCTTAT 522655 Query 111081 ATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAG 111140 || |||||||||| || |||||| ||||| |||||| |||||||| || || || Sbjct 522656 ATGGTGTATAAAGACCACTGTAATCGTAAATCAAATCAACAAAATTTAGGTACCATAAAA 522715 Query 111141 TCTAGTAA 111148 |||||| Sbjct 522716 AGTAGTAA 522723 >seq568 Length=3004646 Score = 143 bits (158), Expect = 6e-29 Identities = 321/479 (67%), Gaps = 5/479 (1%) Strand=Plus/Minus Query 110681 TGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG 110740 ||| || || |||||| || | || || || || | || |||| | |||||||| Sbjct 2377187 TGGTCTAGTGCCAATGCTACGTGTATTTAATAACGCAGCGCGGCATGTCGAACAAGGTGG 2377128 Query 110741 TAAGAGAAAT---GGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGA 110797 ||| | || || | |||||||| || | ||||| ||||| ||||| || || || Sbjct 2377127 TAACAAAAGACCAGGTGCCTTTGCTATTTACATTGAACCCTGGCACTCAGACATCTTCGA 2377068 Query 110798 ATTCTTAGAACTTCGTAAA-AATCAAGGATTTGAAGAACAAAGAGCACGTGATTTATTTT 110856 | | | || ||| ||| ||| || || || | |||||||||| | || | Sbjct 2377067 AGTACTCGA-CTTGAAAAAGAATACCGGCAAAGAGGAGTACCGAGCACGTGAACTGTTCT 2377009 Query 110857 ATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTC 110916 ||| | | ||||| |||||||||| ||||||||||| |||| ||||||| |||| || Sbjct 2377008 ATGGACTATGGATCCCAGATTTATTTATGAAACGTGTAAAAGACAATGGCAAGTGGAGTC 2376949 Query 110917 TTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACC 110976 | |||||||| ||| || | || || | |||| || || || | |||||| | | Sbjct 2376948 TCATGTGTCCGCATGAATCACAGGGACTTTATGATTCATGGGGTGAAAAATTTGAAAAAC 2376889 Query 110977 TTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTT 111036 | ||| | |||||| | |||| | | | ||| | || | || || | Sbjct 2376888 TCTACACTGATTATGAAGAGAAAGGTCGATATGTCCGTCAAGTAGAGGCGCGTGATCTCT 2376829 Query 111037 GGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATC 111096 || | || || ||||||| ||||||||||| || |||||||| | |||||||||| Sbjct 2376828 GGATGGCGATTCTAAAATCACAGGTTGAAACTGGGACCCCTTATATGGTTTATAAAGATC 2376769 Query 111097 ATATTAATCGCAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155 | ||| || ||||| ||||| | || | || || || || ||||||||||||| Sbjct 2376768 ACTGTAACCGTAAATCAAATCATCAGCATCTTGGTACCATAAAAAGTAGTAATTTGTGC 2376710 >seq810 Length=3365380 Score = 89.7 bits (98), Expect = 1e-12 Identities = 119/160 (74%), Gaps = 4/160 (3%) Strand=Plus/Plus Query 305330 GTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAA 305389 ||| | ||||| | ||||| | |||||||||||| |||||||| ||| |||||| Sbjct 34028 GTTATTTTCAACCGACAACCCACTCTGCATAAAATGAGTATGATGGGCCATCGTGTCAAA 34087 Query 305390 GTATTATC-TGGATTGACATTTCGATTAAATGTAAG-TGCTTGTACGCCTTATAATGCGG 305447 || || | |||| | ||||| || | ||| |||| ||| || | ||||| || || | Sbjct 34088 GTCCTACCTTGGAGT-ACATTCCGTATGAATTTAAGTTGCACGT-CACCTTACAACGCTG 34145 Query 305448 ATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487 |||||||||| |||||||||||| | || || || || || Sbjct 34146 ATTTTGATGGTGATGAAATGAATCTTCACGTTCCGCAGTC 34185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186785520366034