Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microplitis_20demolitor_20[refseq_20GCF_5F000572035.2_202015-10-07] 1,794 sequences; 241,190,213 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq640 172 4e-38 seq652 168 5e-37 seq639 132 4e-26 >seq640 Length=4018341 Score = 172 bits (190), Expect = 4e-38 Identities = 457/696 (66%), Gaps = 18/696 (3%) Strand=Plus/Minus Query 19242 AATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGT 19301 ||| || || ||| ||||||||| | || || ||| | ||||||| ||| | || Sbjct 3067090 AATAGGTGGTTTGGATAAAGAGTTCAGCGCTATTTTCCGTCGTGCATTTGCTTCGAGAGT 3067031 Query 19302 TTTTTCTGCAGATGTCATTAAACAATTGGGATGTAAACATGTTCGTGGACTTTTGCTTTA 19361 ||| | | ||| | || | || ||||||| | ||| ||| || ||||||| || Sbjct 3067030 ATTTCCAACTGATATTATGACGCAGCTGGGATGCAGACACGTTAAGGGTATTTTGCTCTA 3066971 Query 19362 TGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA---C 19418 || ||||| ||| |||||||| | || || | | || ||| | | | | Sbjct 3066970 CGGACCACCTGGTACGGGAAAAACTCTTATGGCTCGTCAGATTGGTACCATGTTGAATGC 3066911 Query 19419 AAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATC 19478 | | ||||| ||||| || ||||| || | || | | || ||||| || || Sbjct 3066910 GAGAGAACCT---AAAATCGTCAATGGCCCGCAGATTCTTGACAAGTATGTGGGAGAAAG 3066854 Query 19479 GGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG 19538 |||| || || | | |||||||| || ||||||||||| |||| | || | Sbjct 3066853 TGAAGCCAACGTCAGGAGATTGTTTGCCGAAGCTGAAGAAGAGGAAAAGAAACTGGGTCC 3066794 Query 19539 CAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGG 19598 || ||| | | || ||||| || | |||||| | ||||| ||||||||| | || Sbjct 3066793 AAACAGTGGTCTTCATATTATTATTTTTGATGAAATCGACGCTATCTGTAAGTCTCGTGG 3066734 Query 19599 TT------CTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATT 19652 | ||||| | ||| || ||||||||||| || || ||| | ||||| ||| | Sbjct 3066733 TAGTGTCGCTGGTAACACTGGCGTCCATGACACTGTCGTGAACCAATTGCTGTCCAAAAT 3066674 Query 19653 AGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATT 19712 ||| ||||| | || || ||||||||| | || ||||| |||||||| ||| || | Sbjct 3066673 AGATGGTGTAGAGCAGCTCAATAATATTCTCGTGATTGGTATGACTAACCGACGAGACAT 3066614 Query 19713 AATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACC 19772 || ||| || || |||| || || || ||||| || | || || || | || || Sbjct 3066613 GATTGACGAAGCTTTGCTACGTCCTGGACGATTGGAGTTACAAATGGAGATCAGTTTGCC 3066554 Query 19773 CGATGAATGTGGACGTGTGGAAATTTTAAACATACATACATCAACCATGCG---ACAAAA 19829 ||||| |||| | | |||| ||||| || || ||||| | ||||| ||| || Sbjct 3066553 AGATGAGACTGGAAGATTCCAAATCTTAAATATTCACACATCGAGAATGCGTGAACACAA 3066494 Query 19830 TAACCTTTTAAATGACGATGTAGATCTAGAAGAAATTGCAGCGGCTACCAAAAACTATAG 19889 ||| || | ||||| || | |||| |||||||| ||| ||||| | ||| Sbjct 3066493 TAAAATT---GCTCCGGATGTCGACTTGAAAGAGCTTGCAGCGCTTACGAAAAATTTTAG 3066437 Query 19890 CGGCGCAGAACTTGAGGGATTAGTGAGGGCCGCCCA 19925 |||||| ||| | || || || || || || || || Sbjct 3066436 CGGCGCCGAATTGGAAGGTTTGGTAAGAGCTGCTCA 3066401 >seq652 Length=1546420 Score = 168 bits (186), Expect = 5e-37 Identities = 291/416 (70%), Gaps = 19/416 (5%) Strand=Plus/Plus Query 43854 TGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGC 43913 |||| ||||||||||| || || || |||||||| ||| |||| || | || || Sbjct 810775 TGGCATTTTTTGCTGCTTCTGATGGAATCGTCAATGAGAATCTGGT-AGAGAGATTCAGC 810833 Query 43914 -AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972 |||| || ||| | | ||||| || ||||| |||||||||||||| || || |||||| Sbjct 810834 CAAGAGGTACAAGTTACTGAAGCCCGTTGTTTCTATGGGTTTCAAATCGCAATTGAAAAT 810893 Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATG----GGCACGA 44028 ||||||| |||||||| | || || ||||| || || ||| ||| | |||| Sbjct 810894 GTTCATTCTGAAATGTATTCATTGCTTATTGATACATATATAAAAAATGACAAAGAACGA 810953 Query 44029 GAAGCATCGATTGTTTAATGCGATAGAAACAGTACC---TGCGATTAAACATAAAGCAGA 44085 | | ||| | |||||||| || |||||| | || || | |||| ||||| || Sbjct 810954 G-ATTATC---TTTTTAATGCAATTGAAACACTTCCATGTGTGGCTAAA---AAAGCTGA 811006 Query 44086 CTGGGCCCTTAAATGGATA---AATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTT 44142 ||||| | || |||||| ||| |||| | |||||| ||| || | || ||||| Sbjct 811007 GTGGGCATTAAACTGGATAAGTAATGACAATGCTACTTTTGCTGAAAGAGTAGTAGCGTT 811066 Query 44143 TGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAA 44202 ||||| || ||||| ||||||||| || ||||| |||| || ||||| ||||| Sbjct 811067 TGCAGCCGTCGAAGGTATTTTCTTTAGCGGGAGTTTTGCCTCCATTTTCTGGTTGAAGAA 811126 Query 44203 ACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAG 44258 || || ||||||| || | || || || || ||||| |||||| |||| Sbjct 811127 GCGGGGACTGATGCCCGGTCTTACATTCAGTAACGAATTAATTTCTCGTGACGAAG 811182 >seq639 Length=341822 Score = 132 bits (146), Expect = 4e-26 Identities = 182/252 (72%), Gaps = 2/252 (1%) Strand=Plus/Plus Query 40692 TTTCCGTTGCTAACTACaaaaaaaaTGTTTTGGAAAGGCATTGCAGAAGAACTGTTATGG 40751 ||||| || |||||||||||| | | || |||||||| | | |||||||| ||||| Sbjct 4645 TTTCCATTACTAACTACAAAATCAGTATTCTGGAAAGGTGTAGTTGAAGAACTACTATGG 4704 Query 40752 TTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAAAGAGGAGTGCACATTTGGAAT 40811 ||||| | || | || |||||| | || | || || | ||| || || |||||| || Sbjct 4705 TTTATTAGTGGATCGACAAATGCTCATAAGCTTTCTGAGAAAGGTGTTCATATTTGGGAT 4764 Query 40812 GCGCACAGTTCTAAAACATATTTGTCTAGCATA-GGATTACAAGATAGGGATGAAGGTGA 40870 || ||||||| | | || ||| || | || ||||| || ||||| || |||||||| Sbjct 4765 GCAAACAGTTCAAGAGAATTTTTAGATA-CTTATGGATTTCAGGATAGAGAAGAAGGTGA 4823 Query 40871 TCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTTTGGAGCAAAATATGACACTATGTA 40930 | | || || | ||||||||||| | | ||||||||||||| | ||| | |||| | Sbjct 4824 TTTAGGACCCATCTATGGATTTCAATGGAGACATTTTGGAGCTGAGTATACTAATATGCA 4883 Query 40931 CTCTGATTATAC 40942 | | || ||||| Sbjct 4884 CGCAGACTATAC 4895 Score = 95.1 bits (104), Expect = 1e-14 Identities = 122/166 (73%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 41049 ATGGCATTGCCACCTTGTCATTTGTTATGT-CAGTTTTACGTTTGCAATGGTGAACTGTC 41107 |||||||| ||||||||||| ||| ||| || || || ||| | ||||| ||||| || Sbjct 5988 ATGGCATTACCACCTTGTCA-CTGTCTTGTCCAATTCTATGTTAGTAATGGCGAACTTTC 6046 Query 41108 ATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAG 41167 ||||| | |||||| | | ||||||||| || || || |||||||| || || Sbjct 6047 TTGTCATCTTTATCAACGCAGTGCTGACATGGGTCTCGGAGTACCGTTTAATATTGCATC 6106 Query 41168 TTATGCTCTGCTCACGTATATGATTGCACACGTTACCAATTTAAAA 41213 ||| | || | ||||||||||| || || | || ||||||||| Sbjct 6107 ATATTCACTTTTAACGTATATGATAGCCCATATAACGAATTTAAAA 6152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397447309872970