Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microplitis_20demolitor_20[refseq_20GCF_5F000572035.2_202015-10-07] 1,794 sequences; 241,190,213 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq691 158 8e-34 seq1070 98.7 7e-16 seq628 98.7 7e-16 >seq691 Length=387001 Score = 158 bits (174), Expect = 8e-34 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||||||||| || ||||| ||||||||||||||||||||||| | | Sbjct 73397 ATGCAGATCTTCGTTAAAACTCTTACGGGTAAAACGATCACTCTCGAAGTTGAAGCATCC 73338 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| | ||| ||||| ||||||||||| | ||||||||||| Sbjct 73337 GATACCATTGAAAACGTCAAAGCTAAAATCCAGGACAAAGAAGGAATTCCGCCAGATCAG 73278 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||| || |||||||| ||||||| ||| ||| | || |||||| Sbjct 73277 CAGCGTCTCATTTTTGCTGGTAAACAACTCGAAGACGGACGAACTCTTTCTGACTACAAC 73218 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 || || ||||| || ||| | || || || || Sbjct 73217 ATTCAGAAAGAATCAACACTTCACTTGGTGTT 73186 Score = 158 bits (174), Expect = 8e-34 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||| ||||||||||| || ||||| ||||||||||| ||||| | || Sbjct 74081 ATGCAAATTTTCGTAAAAACCCTCACTGGTAAAACTATCACTCTCGAGGTTGAAGCATCG 74022 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||||| |||| ||||| ||||||||||| | || |||||||| Sbjct 74021 GACACCATTGAAAACGTAAAGGCTAAAATCCAGGACAAAGAAGGAATTCCACCAGATCAG 73962 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || ||||| || |||||||| ||||||| | ||| | ||||||||| Sbjct 73961 CAGCGTCTCATCTTTGCTGGTAAACAACTTGAAGACGGTAGAACTCTTTCAGATTACAAC 73902 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 || ||||| ||||| || | |||||||| || Sbjct 73901 ATCCAAAAGGAGTCAACGCTTCATTTAGTATT 73870 Score = 127 bits (140), Expect = 1e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 23606 TTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACT 23665 ||||||||||||| ||||| ||||| || ||||||||||| || ||| | || ||||| Sbjct 74998 TTAAAATGCAGATCTTCGTGAAAACTCTTACGGGAAAAACAATAACTTTAGAGGTTGAAG 74939 Query 23666 CCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAG 23725 | | ||||| | |||| | ||| || ||| |||||||| || | || || | Sbjct 74938 CTTCTGACACCATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAGGGAATTCCTCCGG 74879 Query 23726 ATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATT 23785 |||| ||||||||||| || || || |||||||||||||| | ||||| | ||| | Sbjct 74878 ATCAGCAGCGTTTAATCTTCGCTGGTAAACAACTGGAAGATGGTCGCACCCTCTCCGACT 74819 Query 23786 ACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 ||||||| || || || || || | || || || ||| Sbjct 74818 ACAACATCCAGAAGGAATCTACCCTTCACTTGGTGTTA 74781 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| |||||||||||||| || || ||||||||||| || | |||||||| | | Sbjct 74309 ATGCAAATTTTCGTTAAAACACTTACTGGAAAAACGATAACATTAGAAGTTGAGGCTTCT 74250 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || ||| | |||| ||||| || || || || |||||| | || ||||| ||| Sbjct 74249 GATACTATCGAAAATGTAAAAGCTAAGATCCAAGATAAGGAAGGTATCCCACCAGACCAA 74190 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || || || || |||||||| ||||| | |||||| | || || ||| Sbjct 74189 CAACGTCTCATCTTCGCTGGTAAACAACTTGAAGATGGACGCACCCTTTCTGACTATAAC 74130 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 || ||||||||||| ||| | || || || || Sbjct 74129 ATCCAAAAAGAGTCAACACTTCACTTGGTCTT 74098 Score = 120 bits (132), Expect = 2e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || || | || |||||||| ||||| |||||||| || || | Sbjct 73853 ATGCAGATTTTTGTCAAGACATTGACTGGAAAAACTATCACCCTCGAAGTCGAAGCCTCT 73794 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||||| | ||||| | || | || || || || ||| | || ||||| || Sbjct 73793 GATACCATTGAAAATGTTAAAGCCAAGA-TTCAAGATAAGGAGGGTATTCCACCAGACCA 73735 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| ||| | || || || || |||||||| || || | | | ||| | ||||| || Sbjct 73734 ACAACGTCTTATCTTCGCTGGTAAACAACTCGAGGATGGAAGAACTCTTTCAGATTATAA 73675 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTT 23822 ||| || |||||||| ||| | ||||||||||| Sbjct 73674 CATTCAGAAAGAGTCAACACTCCATTTAGTTTT 73642 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| ||||| |||||||| | || |||||||| ||||| | |||||||| | | Sbjct 74537 ATGCAAATTTTTGTTAAAACTTTGACTGGAAAAACTATCACCTTGGAAGTTGAAGCTTCT 74478 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || | |||| | || |||||| ||||||||||| | || |||||||| Sbjct 74477 GATACGATCGAAAACGTCAAGGCTAAAATTCAGGACAAAGAAGGAATTCCTCCAGATCAG 74418 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || || |||||||| ||||| | ||| || | |||||||| Sbjct 74417 CAGCGTCTTATTTTCGCTGGTAAACAACTTGAAGATGGACGTACCCTGTCTGATTACAAT 74358 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || || |||||||| || | |||||||| Sbjct 74357 ATCCAGAAAGAGTCAACTCTTCATTTAGT 74329 Score = 113 bits (124), Expect = 3e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || | || ||||| || |||||||| ||||| || || | Sbjct 74765 ATGCAGATCTTTGTCAAGACATTGACTGGAAAGACAATCACTCTGGAAGTAGAGGCCTCA 74706 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 |||||| |||||| |||| || ||| ||||||||||| | || |||||||| Sbjct 74705 GACACTATTGAAAACGTAAAGGCCAAGATTCAAGACAAAGAAGGAATTCCTCCAGATCAG 74646 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || || |||||||| || |||| | | ||| | || |||||| Sbjct 74645 CAGCGTCTCATCTTCGCTGGTAAACAACTTGAGGACGGAAGAACTCTTTCTGACTACAAC 74586 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||| || || Sbjct 74585 ATCCAGAAAGAATCTAC 74569 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || || | || |||||||| ||||| ||||||||||| | | Sbjct 73169 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAAACCATCACCCTCGAAGTTGAAGCATCT 73110 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||||| | ||| || ||| |||||||| || | || || || || Sbjct 73109 GACACCATTGAAAACGTTAAAGCCAAGATTCAGGACAAAGAGGGGATTCCACCTGACCAG 73050 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 |||||| | || || || || || || || ||||| | ||||| | || |||||| Sbjct 73049 CAGCGTCTGATCTTCGCAGGTAAGCAGCTTGAAGATGGTCGCACCCTCTCGGACTACAAC 72990 Query 23791 ATACAAAAAGAGTCCAC 23807 || || ||||| || || Sbjct 72989 ATCCAGAAAGAATCTAC 72973 >seq1070 Length=378361 Score = 98.7 bits (108), Expect = 7e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23604 ACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGA 23663 ||| ||||||||||||||||| ||||| | ||||| ||||| || || || ||||| || Sbjct 194408 ACTGAAAATGCAGATTTTCGTGAAAACGTTGACGGGTAAAACCATTACCCTTGAAGTCGA 194467 Query 23664 CTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCC 23723 | | ||||| | |||| | ||| ||||| || || || || | || || Sbjct 194468 GGCTTCTGACACAATCGAAAATGTCAAAGCTAAAATCCAAGATAAGGAGGGAATTCCTCC 194527 Query 23724 AGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGA 23783 |||||| || ||| | || ||||| || ||||| ||||||| | ||| ||| | || Sbjct 194528 AGATCAGCAACGTCTGATTTTTGCTGGAAAACAGTTGGAAGATGGACGTACTCTTTCTGA 194587 Query 23784 TTACAACATACAAAAAG 23800 |||||||| || |||| Sbjct 194588 CTACAACATCCAGAAAG 194604 >seq628 Length=266871 Score = 98.7 bits (108), Expect = 7e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| || |||||||| | ||||| || || || ||| | |||||||| | Sbjct 233150 AAAATGCAGATCTTTGTTAAAACTTTGACGGGGAAGACAATTACTTTGGAAGTTGAGGCT 233091 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | |||||| |||||| | ||| || ||| ||||| || || | || ||||| Sbjct 233090 TCTGACACTATTGAAAATGTCAAAGCTAAGATTCAAGACAAGGAGGGGATCCCTCCAGAC 233031 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||| | || || || || || || || ||||||| | || || ||| || ||| Sbjct 233030 CAGCAGAGATTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGAACATTATCAGACTAC 232971 Query 23788 AACATACAAAAAGAGTCCACATTACAT 23814 || || || || || |||||| ||||| Sbjct 232970 AATATCCAGAAGGAATCCACACTACAT 232944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338002209631352